DY257777

Overview
NameDY257777
Unique NameDY257777
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY257777_ssr776 microsatellite DY257777_ssr776:776..787. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY257777 vs. ExPASy Swiss-Prot
Match: 1433B_SHEEP (14-3-3 protein beta/alpha (Fragments) OS=Ovis aries GN=YWHAB PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.270e-34
Identity = 75/120 (62.50%), Postives = 88/120 (73.33%), Query Frame = 2
Query:  152 YKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGD 511
            YKMKGDY+RYL+   +GD ++     S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSP            EAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D GD
Sbjct:   84 YKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSP------------EAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 191          
BLAST of DY257777 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.181e-32
Identity = 76/167 (45.51%), Postives = 103/167 (61.68%), Query Frame = 2
Query:   32 IKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDI 532
            I  Y++KVE EL  +  +++ +I  H +P    GE+ VF+YKMKGDYYRYLA F TG E+K   D S+ AYQA                   A  FS+   EIMNSPERA  +AKQA DEA +E+++   E YKDS L+MQLL++NL LWTS++   GG+ ++  D+
Sbjct:   80 INGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQA----------------WPCAQLFSLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSEL--TGGETSKDDDV 226          
BLAST of DY257777 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.603e-22
Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = 2
Query:  338 IMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 514
            I+NSP+RAC+LAKQAFDEAISELD+L EESYKDSTLIMQLL DNLTLWTSD  EDGGDE
Sbjct:    1 ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNLTLWTSDTNEDGGDE 59          
The following BLAST results are available for this feature:
BLAST of DY257777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_SHEEP2.270e-3462.5014-3-3 protein beta/alpha (Fragments) OS=Ovis arie... [more]
14338_ORYSJ6.181e-3245.51Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]
1433X_MAIZE2.603e-2286.4414-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BE04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257777 ID=DY257777; Name=DY257777; organism=Citrus clementina; type=EST; length=789bp
GGCCAGAGGGAATGAACTTATTGTGAAAAGAATTAAAGAGTATAGGCAAA
AGGTAGAAGCTGAGCTGTCCAAGATCAGCACTGATATTATGCAAGTCATT
GATGAGCATTTGATCCCTTCCTGCACCGGAGGTGAATCCACTGTGTTTTA
CTATAAAATGAAAGGTGATTATTATCGGTACTTGGCATAGTTTAAGACTG
GTGATGAAAGGAAAAATGTTGCTGATCTGTCAATGAAAGCCTATCAGGCA
GCTTCTACTACCGCAGAAGCTGAATTGTCTCCTACCCACCCCATCCGACT
TGGTTTGGCCTTGAACTTCTCAGTTTTTTACTATGAGATTATGAACTCTC
CTGAAAGGGCATGCCACCTTGCAAAGCAGGCCTTTGATGAAGCCATCTCA
GAATTGGATACATTAAGTGAGGAATCTTACAAAGACAGCACGTTGATAAT
GCAGCTATTGAGGGACAACCTCACTCTTTGGACTTCTGACATACCAGAGG
ATGGAGGTGATGAAGCCCAGAAAATGGACATCTCTGCTAAAGATGGTGAA
GGCGAAGATTGAAGAAGCAGAGTGAACCAGCCAGGAGCTTGGGAGCTCTA
GCATATGATAGCAAGGAAGCTGCAATACCTTTATGACTCCCGGTGTTTTT
CTTAGTTTACAAGAGACACTCAAGTACTGTTATTGTGCTGTTCCTATAAT
GTGGGTGTTATCTTCACTGTCAAGAGTTTCATGATTGGACTGCTTGTATC
ATTTGCATCCCAGAATCTTTTATATCTGCTGCTGCTGAT
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