DY257777

Overview
NameDY257777
Unique NameDY257777
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length789
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY257777_ssr776 microsatellite DY257777_ssr776:776..787. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY257777 vs. ExPASy Swiss-Prot
Match: 143B1_DANRE (14-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywhab1 PE=2 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.368e-55
Identity = 104/171 (60.82%), Postives = 134/171 (78.36%), Query Frame = 2
Query:    8 GNELIVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 520
            GNE   +  +EYR+K+EAEL +I  D++ +++++LIP+ +  ES VFY KMKGDYYRYL+   +GD ++   + S KAYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+N+PE+AC LAK AFDEAI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:   71 GNEKKQQMAREYREKIEAELQEICNDVLGLLEKYLIPNASQAESKVFYLKMKGDYYRYLSEVASGDSKRTTVENSQKAYQDAFEISKKEMQPTHPIRLGLALNFSVFYYEILNTPEQACSLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 241          
BLAST of DY257777 vs. ExPASy Swiss-Prot
Match: 1433B_PONAB (14-3-3 protein beta/alpha OS=Pongo abelii GN=YWHAB PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.786e-55
Identity = 104/162 (64.20%), Postives = 129/162 (79.63%), Query Frame = 2
Query:   35 KEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 520
            KEYR+K+EAEL  I  D+++++D++LIP+ T  ES VFY KMKGDY+RYL+   +GD ++     S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:   82 KEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 243          
BLAST of DY257777 vs. ExPASy Swiss-Prot
Match: 1433B_MACFA (14-3-3 protein beta/alpha OS=Macaca fascicularis GN=YWHAB PE=2 SV=3)

HSP 1 Score: 216.083 bits (549), Expect = 1.786e-55
Identity = 104/162 (64.20%), Postives = 129/162 (79.63%), Query Frame = 2
Query:   35 KEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 520
            KEYR+K+EAEL  I  D+++++D++LIP+ T  ES VFY KMKGDY+RYL+   +GD ++     S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:   82 KEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 243          
BLAST of DY257777 vs. ExPASy Swiss-Prot
Match: 1433B_HUMAN (14-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB PE=1 SV=3)

HSP 1 Score: 216.083 bits (549), Expect = 1.786e-55
Identity = 104/162 (64.20%), Postives = 129/162 (79.63%), Query Frame = 2
Query:   35 KEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 520
            KEYR+K+EAEL  I  D+++++D++LIP+ T  ES VFY KMKGDY+RYL+   +GD ++     S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:   82 KEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 243          
BLAST of DY257777 vs. ExPASy Swiss-Prot
Match: 143B1_ONCMY (14-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.047e-55
Identity = 105/171 (61.40%), Postives = 131/171 (76.61%), Query Frame = 2
Query:    8 GNELIVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 520
            GNE   +  +EYR+K+EAEL  I  D++ ++D +LI + T  ES VFY KMKGDYYRYL+   +GD +K   + S +AYQ A   ++ ++ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:   71 GNEKKQQMAREYREKIEAELQDICKDVLALLDNYLIANATQAESKVFYLKMKGDYYRYLSEVASGDSKKTTVENSQQAYQEAFDISKKDMQPTHPIRLGLALNFSVFYYEILNSPEQACSLAKAAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 241          
BLAST of DY257777 vs. ExPASy Swiss-Prot
Match: 143G2_ONCMY (14-3-3 protein gamma-2 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.979e-55
Identity = 105/176 (59.66%), Postives = 133/176 (75.57%), Query Frame = 2
Query:    2 ARGNELIVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSC--TGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQK 523
            A GNE  ++ ++ YR+K+E EL  +  D++ ++D +LI +C  T  ES VFY KMKGDYYRYLA   TG++R  V + S KAY  A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SY+DSTLIMQLLRDNLTLWTSD  +D G E  K
Sbjct:   72 ADGNEKKIEMVRAYREKIEKELEAVCQDVLNLLDNYLIKNCNETQHESKVFYLKMKGDYYRYLAEVATGEKRATVIESSEKAYNEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYQDSTLIMQLLRDNLTLWTSDQQDDEGGEGNK 247          
BLAST of DY257777 vs. ExPASy Swiss-Prot
Match: 1433G_RAT (14-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 3.979e-55
Identity = 105/173 (60.69%), Postives = 132/173 (76.30%), Query Frame = 2
Query:    2 ARGNELIVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSC--TGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 514
            A GNE  ++ ++ YR+K+E EL  +  D++ ++D +LI +C  T  ES VFY KMKGDYYRYLA   TG++R  V + S KAY  A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G E
Sbjct:   72 ADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
BLAST of DY257777 vs. ExPASy Swiss-Prot
Match: 1433G_PONAB (14-3-3 protein gamma OS=Pongo abelii GN=YWHAG PE=2 SV=3)

HSP 1 Score: 214.927 bits (546), Expect = 3.979e-55
Identity = 105/173 (60.69%), Postives = 132/173 (76.30%), Query Frame = 2
Query:    2 ARGNELIVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSC--TGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 514
            A GNE  ++ ++ YR+K+E EL  +  D++ ++D +LI +C  T  ES VFY KMKGDYYRYLA   TG++R  V + S KAY  A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G E
Sbjct:   72 ADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
BLAST of DY257777 vs. ExPASy Swiss-Prot
Match: 1433G_MOUSE (14-3-3 protein gamma OS=Mus musculus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 3.979e-55
Identity = 105/173 (60.69%), Postives = 132/173 (76.30%), Query Frame = 2
Query:    2 ARGNELIVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSC--TGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 514
            A GNE  ++ ++ YR+K+E EL  +  D++ ++D +LI +C  T  ES VFY KMKGDYYRYLA   TG++R  V + S KAY  A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G E
Sbjct:   72 ADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
BLAST of DY257777 vs. ExPASy Swiss-Prot
Match: 1433G_HUMAN (14-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 3.979e-55
Identity = 105/173 (60.69%), Postives = 132/173 (76.30%), Query Frame = 2
Query:    2 ARGNELIVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSC--TGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 514
            A GNE  ++ ++ YR+K+E EL  +  D++ ++D +LI +C  T  ES VFY KMKGDYYRYLA   TG++R  V + S KAY  A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G E
Sbjct:   72 ADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
The following BLAST results are available for this feature:
BLAST of DY257777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
143B1_DANRE1.368e-5560.8214-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywha... [more]
1433B_PONAB1.786e-5564.2014-3-3 protein beta/alpha OS=Pongo abelii GN=YWHAB... [more]
1433B_MACFA1.786e-5564.2014-3-3 protein beta/alpha OS=Macaca fascicularis G... [more]
1433B_HUMAN1.786e-5564.2014-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB... [more]
143B1_ONCMY3.047e-5561.4014-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss... [more]
143G2_ONCMY3.979e-5559.6614-3-3 protein gamma-2 OS=Oncorhynchus mykiss PE=2... [more]
1433G_RAT3.979e-5560.6914-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag... [more]
1433G_PONAB3.979e-5560.6914-3-3 protein gamma OS=Pongo abelii GN=YWHAG PE=2... [more]
1433G_MOUSE3.979e-5560.6914-3-3 protein gamma OS=Mus musculus GN=Ywhag PE=1... [more]
1433G_HUMAN3.979e-5560.6914-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BE04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257777 ID=DY257777; Name=DY257777; organism=Citrus clementina; type=EST; length=789bp
GGCCAGAGGGAATGAACTTATTGTGAAAAGAATTAAAGAGTATAGGCAAA
AGGTAGAAGCTGAGCTGTCCAAGATCAGCACTGATATTATGCAAGTCATT
GATGAGCATTTGATCCCTTCCTGCACCGGAGGTGAATCCACTGTGTTTTA
CTATAAAATGAAAGGTGATTATTATCGGTACTTGGCATAGTTTAAGACTG
GTGATGAAAGGAAAAATGTTGCTGATCTGTCAATGAAAGCCTATCAGGCA
GCTTCTACTACCGCAGAAGCTGAATTGTCTCCTACCCACCCCATCCGACT
TGGTTTGGCCTTGAACTTCTCAGTTTTTTACTATGAGATTATGAACTCTC
CTGAAAGGGCATGCCACCTTGCAAAGCAGGCCTTTGATGAAGCCATCTCA
GAATTGGATACATTAAGTGAGGAATCTTACAAAGACAGCACGTTGATAAT
GCAGCTATTGAGGGACAACCTCACTCTTTGGACTTCTGACATACCAGAGG
ATGGAGGTGATGAAGCCCAGAAAATGGACATCTCTGCTAAAGATGGTGAA
GGCGAAGATTGAAGAAGCAGAGTGAACCAGCCAGGAGCTTGGGAGCTCTA
GCATATGATAGCAAGGAAGCTGCAATACCTTTATGACTCCCGGTGTTTTT
CTTAGTTTACAAGAGACACTCAAGTACTGTTATTGTGCTGTTCCTATAAT
GTGGGTGTTATCTTCACTGTCAAGAGTTTCATGATTGGACTGCTTGTATC
ATTTGCATCCCAGAATCTTTTATATCTGCTGCTGCTGAT
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