DY257794

Overview
NameDY257794
Unique NameDY257794
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length851
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: HBL_MAIZE (Non-symbiotic hemoglobin OS=Zea mays GN=HB PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.681e-58
Identity = 109/151 (72.19%), Postives = 131/151 (86.75%), Query Frame = 2
Query:  275 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVP-EMWSPELKNAWAEAYDQLAAAIKTEMKP 724
            F EEQEALV+KSW  MKK++  L L+FFL++FEIAPSA+++F+FL+DSD+P+E+NPKLK HA +VFVMTCE+A QLRKAGKVTVRE+ LK LGATH +YGVAD HFEVT +ALLETIKEA+P +MWS E+K AWAEAY QL AAIK EMKP
Sbjct:   13 FGEEQEALVLKSWAVMKKDAANLGLRFFLKVFEIAPSAEQMFSFLRDSDVPLEKNPKLKTHAMSVFVMTCEAAAQLRKAGKVTVRETTLKRLGATHLRYGVADGHFEVTGFALLETIKEALPADMWSLEMKKAWAEAYSQLVAAIKREMKP 163          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: HBL1_ORYSJ (Non-symbiotic hemoglobin 1 OS=Oryza sativa subsp. japonica GN=HB1 PE=1 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.653e-57
Identity = 105/152 (69.08%), Postives = 132/152 (86.84%), Query Frame = 2
Query:  272 AFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVP-EMWSPELKNAWAEAYDQLAAAIKTEMKP 724
            +F+EEQEALV+KSW  +KK+S  +AL+FFL+IFE+APSA ++F+FL++SD+P+E+NPKLK HA +VFVMTCE+A QLRKAGKVTVR++ LK LGATH KYGV D HFEV K+ALL+TIKE VP +MWSP +K+AW+EAYD L AAIK EMKP
Sbjct:   13 SFSEEQEALVLKSWAILKKDSANIALRFFLKIFEVAPSASQMFSFLRNSDVPLEKNPKLKTHAMSVFVMTCEAAAQLRKAGKVTVRDTTLKRLGATHLKYGVGDAHFEVVKFALLDTIKEEVPADMWSPAMKSAWSEAYDHLVAAIKQEMKP 164          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: HBL3_ORYSJ (Non-symbiotic hemoglobin 3 OS=Oryza sativa subsp. japonica GN=HB3 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.310e-54
Identity = 104/160 (65.00%), Postives = 127/160 (79.38%), Query Frame = 2
Query:  248 NSGSFNVTAFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVP-EMWSPELKNAWAEAYDQLAAAIKTEMKP 724
            N  S     FTEEQEALV+KSW  MK +S  +  +FFL+IFE+APSA++LF+FL++SD+P+E+NPKLK HA  VFVMTCE+A QLRK G+VTVR++ +K LG+THFK GV+D HFEV K+ALLETIKEAVP  MWSP +K AW EAYD L AAIK  MKP
Sbjct:    7 NVVSRGAVRFTEEQEALVLKSWAIMKNDSAHIGHRFFLKIFEVAPSARQLFSFLRNSDVPLEKNPKLKIHAMAVFVMTCEAAAQLRKTGRVTVRDTTIKRLGSTHFKNGVSDAHFEVAKFALLETIKEAVPASMWSPAMKGAWGEAYDHLVAAIKQGMKP 166          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: HBL4_ORYSJ (Non-symbiotic hemoglobin 4 OS=Oryza sativa subsp. japonica GN=HB4 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.500e-54
Identity = 100/159 (62.89%), Postives = 126/159 (79.25%), Query Frame = 2
Query:  251 SGSFNVTAFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVP-EMWSPELKNAWAEAYDQLAAAIKTEMKP 724
            S S     FTEEQEALV+KSW  MK +S  +  +FFL+IFE+APSA+ LF+FL++SD+P+E+NP LK HA  VFVMTCE+A QLRK G+VTVR++ +K LG+THFK GV+D HFEV ++ALLETIK+ +P  MWSPE+KNAW EAY+ L AAIK  MKP
Sbjct:    5 SASNGAVRFTEEQEALVLKSWAIMKDDSANIGHRFFLKIFEVAPSARHLFSFLRNSDVPLEKNPNLKKHAMAVFVMTCEAAAQLRKTGRVTVRDTTIKRLGSTHFKNGVSDTHFEVARFALLETIKDGIPASMWSPEMKNAWGEAYEHLVAAIKEGMKP 163          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: HBL2_SOLLC (Non-symbiotic hemoglobin 2 OS=Solanum lycopersicum GN=HB2 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.805e-43
Identity = 88/148 (59.46%), Postives = 108/148 (72.97%), Query Frame = 2
Query:  275 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 718
            FT++QEALV  SW  MK++  +L+L+FF  I EIAP AK +F+FLKDSD   E NPKL+ HA  VF MTCESA+QLR+ G+V V E+ LK LG+ H +  VAD HFEV K ALL T+KEA    W  E+K AW+EAYDQLA+AIK EM
Sbjct:    3 FTDKQEALVRDSWEFMKQDIPQLSLRFFSLILEIAPVAKNMFSFLKDSDELPENNPKLRAHAVKVFKMTCESAIQLREKGEVVVGETTLKYLGSIHLQKRVADPHFEVVKEALLRTVKEATGNKWKDEMKEAWSEAYDQLASAIKAEM 150          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: HBL2_GOSHI (Non-symbiotic hemoglobin 2 OS=Gossypium hirsutum GN=HB2 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.735e-42
Identity = 86/150 (57.33%), Postives = 108/150 (72.00%), Query Frame = 2
Query:  275 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAV-PEMWSPELKNAWAEAYDQLAAAIKTEMK 721
            FTE+QE LV +SW  +K++    +L+FF  I EIAP AK +F+FL++S+   + NPKLK HA  VF MTCESA+QLR+ G+V V ++ LK LG  H K GV D HFEV K ALL TI+EA+  E W+ E+KNAW EAYDQLA AIK EMK
Sbjct:    3 FTEKQEGLVKESWEVLKQDIPHSSLRFFSLILEIAPGAKNMFSFLRESEEIPQNNPKLKAHAVKVFKMTCESAIQLREKGEVVVADTTLKYLGTVHVKSGVKDPHFEVVKEALLRTIEEAIGEEKWNEEMKNAWGEAYDQLAEAIKAEMK 152          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: HBL2_ARATH (Non-symbiotic hemoglobin 2 OS=Arabidopsis thaliana GN=AHB2 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.833e-41
Identity = 84/149 (56.38%), Postives = 110/149 (73.83%), Query Frame = 2
Query:  275 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEMK 721
            FTE+QEALV +SW  +K++  + +L FF +I EIAP+AK LF+FL+DSD     NPKLK HA  VF MTCE+A+QLR+ GKV V ++ L+ LG+ H K GV D HFEV K ALL T+KE + E ++ E++ AW++AYD LA AIKTEMK
Sbjct:    6 FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKLKAHAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTLKEGLGEKYNEEVEGAWSQAYDHLALAIKTEMK 154          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: HBL2_BRANA (Non-symbiotic hemoglobin 2 OS=Brassica napus GN=HB2 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.406e-40
Identity = 81/149 (54.36%), Postives = 110/149 (73.83%), Query Frame = 2
Query:  275 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEMK 721
            FTE+QEALV +SW  +K++  + +L FF +I EIAP+AK +F+FL+D+D     NPKLK HA  VF MTCE+A+QLR+ GKV V ++ L+ LG+ HFK GV D HFEV K AL+ T+KE + E ++ E++ AW++AYD LA AIK EMK
Sbjct:    6 FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKDMFSFLRDTDEVPHNNPKLKAHAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSVHFKSGVLDPHFEVVKEALVRTLKEGLGEKYNEEVEGAWSKAYDHLALAIKAEMK 154          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: HBL0_PHYPA (Non-symbiotic hemoglobin 0 OS=Physcomitrella patens GN=GLB0 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.931e-38
Identity = 75/151 (49.67%), Postives = 105/151 (69.54%), Query Frame = 2
Query:  266 VTAFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 718
            V  +++E E LV +SW  +KK++    + FF ++FEIAP AK +++FL+DS IP E+NPK+K HA  VF+MT ++AVQL + G   V ES L+ L ATH   GV D+ FE+ K A+L  I+  VP++WSPELK+AW +AYD LA  +K EM
Sbjct:   21 VKTYSKENEQLVKQSWEILKKDAQRNGINFFRKVFEIAPGAKAMYSFLRDSTIPFEENPKVKNHARYVFMMTGDAAVQLGEKGAYQVLESKLQKLAATHVNAGVTDDQFEIVKEAILYAIEMGVPDLWSPELKSAWGDAYDMLAEQVKAEM 171          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: HBP1_CASGL (Hemoglobin-1 OS=Casuarina glauca PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 1.043e-35
Identity = 77/150 (51.33%), Postives = 97/150 (64.67%), Query Frame = 2
Query:  272 AFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEMK 721
            A TE+QEAL+ +SW  +K+N    +L+ F  I E AP +K +F+FLKDS+   E NPKLK HA  +F   CESA +LR+ G      + LK LG+ H K  + D HFEV K ALL TIKEA+ E WS E+  AW EAY+QL A IK EMK
Sbjct:    2 ALTEKQEALLKQSWEVLKQNIPAHSLRLFALIIEAAPESKYVFSFLKDSNEIPENNPKLKAHAAVIFKTICESATELRQKGHAVWDNNTLKRLGSIHLKNKITDPHFEVMKGALLGTIKEAIKENWSDEMGQAWTEAYNQLVATIKAEMK 151          
The following BLAST results are available for this feature:
BLAST of DY257794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HBL_MAIZE5.681e-5872.19Non-symbiotic hemoglobin OS=Zea mays GN=HB PE=2 SV... [more]
HBL1_ORYSJ1.653e-5769.08Non-symbiotic hemoglobin 1 OS=Oryza sativa subsp. ... [more]
HBL3_ORYSJ1.310e-5465.00Non-symbiotic hemoglobin 3 OS=Oryza sativa subsp. ... [more]
HBL4_ORYSJ6.500e-5462.89Non-symbiotic hemoglobin 4 OS=Oryza sativa subsp. ... [more]
HBL2_SOLLC8.805e-4359.46Non-symbiotic hemoglobin 2 OS=Solanum lycopersicum... [more]
HBL2_GOSHI9.735e-4257.33Non-symbiotic hemoglobin 2 OS=Gossypium hirsutum G... [more]
HBL2_ARATH2.833e-4156.38Non-symbiotic hemoglobin 2 OS=Arabidopsis thaliana... [more]
HBL2_BRANA1.406e-4054.36Non-symbiotic hemoglobin 2 OS=Brassica napus GN=HB... [more]
HBL0_PHYPA2.931e-3849.67Non-symbiotic hemoglobin 0 OS=Physcomitrella paten... [more]
HBP1_CASGL1.043e-3551.33Hemoglobin-1 OS=Casuarina glauca PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1CA02ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257794 ID=DY257794; Name=DY257794; organism=Citrus clementina; type=EST; length=851bp
GCTCCCTCAATTTTCTGCTCTGCATCTTGTGGCCATTCATAGTGTTGCTT
CAAAAGCTACAACCATGCTACTCTCAAATGATTCTGTCATCTACAAGTGT
GATACAAGGGATTTGAGTAAGATTTTTGCAACCTCAACGTCAAGAGTTAG
GCATCAACAATACGTGAATCTCTCATGGAAGATGAGGGATGGATCATTGA
AGGGTCTTTTTTGCACAGCTCCAAAATCAATCAGAAGTGTGAGGAGGAAC
AGCGGAAGCTTCAACGTGACTGCTTTTACAGAAGAGCAAGAGGCTCTAGT
GGTCAAATCTTGGAATGCCATGAAAAAAAATTCTGGGGAACTTGCTCTTA
AGTTCTTCTTGAGGATCTTTGAGATTGCACCATCAGCAAAGAAGCTGTTC
ACTTTTCTCAAAGATTCAGATATTCCTGTGGAGCAGAATCCGAAACTAAA
GCCCCATGCCACGACTGTCTTTGTTATGACGTGTGAATCGGCAGTGCAAC
TTAGAAAGGCTGGCAAAGTTACAGTGAGAGAGTCCAATCTAAAAGACTTG
GGAGCTACCCATTTCAAATACGGAGTTGCTGATGAACATTTTGAGGTGAC
AAAGTATGCATTGTTGGAGACCATAAAGGAAGCAGTACCTGAAATGTGGT
CACCAGAGTTGAAGAATGCTTGGGCGGAGGCTTATGATCAACTGGCTGCC
GCCATCAAAACTGAAATGAAGCCTCCTTCATAATTTGCTGATTGAATGTA
AAAGTGATGCTGTTTCATGGAAAAAAATAATATTGTAAAAATGTCATGTA
ATCATCAATTATCGAATATTGTGTTGATCTAATCTAAGATCCAGTTCTCT
C
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