DY257795

Overview
NameDY257795
Unique NameDY257795
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length839
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14757 contig Ccv1_Contig14757:262..1100. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257795 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 1.242e-73
Identity = 138/227 (60.79%), Postives = 159/227 (70.04%), Query Frame = 2
Query:    2 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP--NYPC-RGKYY-GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGG-NDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNL 667
            FYTY+AFI AAK FP FGN+G++ MRKREIAAF  QT HETTGGWPDAP G YAWGYC+ +E+      YCDP  NY C  GK Y GRGPIQL+WNYNY  CG+ L     LL  P+L+ T+     V+SFK+AIWFWM  Q PKPSCH VI   W PSA D+ AGR+PGYG+ TNIINGGIECG GG N A  +RIGF+  +C   G   G NLDC  QRP+G  L
Sbjct:  115 FYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINC--QPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKL--PLLQEPELVETDP----VISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDCYQQRPFGYGL 333          
BLAST of DY257795 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.768e-73
Identity = 131/222 (59.01%), Postives = 159/222 (71.62%), Query Frame = 2
Query:    2 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 655
            FYTY+AF+ AA AFPAFG +GN   RKRE+AAF  QT HETTGGWP AP G ++WGYCF +E    S DYC P+  +PC    KYYGRGPIQL++N+NY   G  +G   DLL+NPDL+AT+      +SFK+A+WFWMT Q  KPS H+VI   W PS  D  AGR PGYG+ TNI+NGG+ECG+G +D V NRIGF+  +CG FGI  G NLDC NQRP+
Sbjct:  115 FYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPS-DYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIG--VDLLSNPDLVATD----ATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329          
BLAST of DY257795 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 3.060e-72
Identity = 130/221 (58.82%), Postives = 160/221 (72.40%), Query Frame = 2
Query:    2 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP-NYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 655
            FYTYDAFI AA++F  FG +G++  +K+E+AAF AQT HETTGGWP AP G YAWGYCF  E       YC P ++PC    KYYGRGPIQLT NYNY   G+ +   EDL+NNPDLL+TN      +SFK+AIWFWMT Q  KPS H+VI   W PSA D +AGR+PGYG+ TNIINGGIECG+G ++ V +R+GF+  +C  FG+ PG NLDC+NQR +
Sbjct:  106 FYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEV-YCSPKDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIK--EDLINNPDLLSTNP----TVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQRSF 319          
BLAST of DY257795 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 5.219e-72
Identity = 132/222 (59.46%), Postives = 160/222 (72.07%), Query Frame = 2
Query:    2 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 655
            FYTYDAF+ AA AFP FG +G+   +KRE+AAF AQT HETTGGW  AP G +AWGYCF +E GA SSDYC P+  +PC    +YYGRGPIQL+ NYNY   G  +G   DLL NPDL+AT+   G    FK+AIWFWMTAQPPKPS H VI  +W PS  D  AGR+PG+G+ TNIINGGIECG+G +  V +RIGF+  +C   G+  G+NLDC +QRP+
Sbjct:   51 FYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGA-SSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIG--VDLLANPDLVATDATVG----FKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 265          
BLAST of DY257795 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 8.903e-72
Identity = 125/223 (56.05%), Postives = 157/223 (70.40%), Query Frame = 2
Query:    2 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREV-GAASSDYC--DPNYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 655
            FYTYDAF+ AA AFP+F  +G+   RKRE+AAF AQT HETTGGW  AP G Y+WGYCF  E  G   SDYC     +PC    KYYGRGPIQ+++NYNY   G+ +G   +LL+NPDL+A++      +SFK+A WFWMT Q PKPSCH V+  +W P+ ND  AGR+PGYG+ TNIINGG+ECG+G +  V +RIGF+  +C   G+  G NLDC NQRP+
Sbjct:  105 FYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIG--SNLLSNPDLVASD----ATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDCYNQRPF 321          
BLAST of DY257795 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.163e-71
Identity = 130/222 (58.56%), Postives = 159/222 (71.62%), Query Frame = 2
Query:    2 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 655
            FYTYDAF+ AA AFP FG +G+   RKR++AAF AQT HETTGGW  AP G +AWGYCF +E GAA+ DYC P+  +PC    +YYGRGPIQL+ NYNY   G  +G   DLL NPDL+AT+      +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR PG+G+ TNIINGG+ECG+G +  V +RIGF+  +C   G+  GDNLDC NQRP+
Sbjct:   51 FYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAA-DYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIG--VDLLRNPDLVATDP----TVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265          
BLAST of DY257795 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 5.771e-71
Identity = 126/223 (56.50%), Postives = 157/223 (70.40%), Query Frame = 2
Query:    2 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 658
            FYTY+AFI A K F AFG +G+   R +EIAAF AQT HETTGGW  AP G Y+WGYC+NRE G+   DYC     +PC    KY+GRGPIQ+++NYNY   G  +G   +LLNNPDL+A +     V+SFK+A+WFWMTAQ PKPS H+VI   W PS  D   GR+PG+G+ TNIINGG+EC  G N  + NRIGF+  +C   G+ PG+NLDC+NQRP+G
Sbjct:   31 FYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPG-DYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIG--VNLLNNPDLVAND----AVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246          
BLAST of DY257795 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.679e-70
Identity = 130/222 (58.56%), Postives = 160/222 (72.07%), Query Frame = 2
Query:    2 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 655
            FYTYDAF+ AA AFP FG +G+   RKRE+AAF AQT HETTGGW  AP G +AWGYCF +E GA +S+YC P+  +PC  GK YYGRGPIQL+ NYNY   G  +G   DLL NPDL+AT+      +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR+PG+G+ TNI+NGGIECG+G +  V +RIGF+  +C    +  G+NLDC NQRP+
Sbjct:  106 FYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGA-TSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIG--VDLLRNPDLVATDP----TVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDCYNQRPF 320          
BLAST of DY257795 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.193e-70
Identity = 128/204 (62.75%), Postives = 154/204 (75.49%), Query Frame = 2
Query:    2 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCG 601
            FY+Y+AFI AA++F  FG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF RE G+   DYC P+  +PC    KY+GRGPIQ++ NYNY  CG  +G   DLLNNPDL+AT+     V+SFKSAIWFWMT Q PKPSCH+VII  W+PSA D  A RLPG+G+ TNIINGG+ECG G +  V++RIGF+  +CG
Sbjct:  105 FYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPG-DYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIG--VDLLNNPDLVATDP----VISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFYRRYCG 301          
BLAST of DY257795 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4)

HSP 1 Score: 264.233 bits (674), Expect = 6.380e-70
Identity = 129/222 (58.11%), Postives = 159/222 (71.62%), Query Frame = 2
Query:    2 FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 655
            FYTYDAF+ AA AF  FG +G    RKRE+AAF AQT HETTGGW  AP G +AWGYCF +E GA +S+YC P+  +PC  GK YYGRGPIQL+ NYNY   G  +G   DLL NPDL+AT+      +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR+PG+G+ TNI+NGGIECG+G +  V +RIGF+  +C   G+  G+NLDC +QRP+
Sbjct:  103 FYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGA-TSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIG--VDLLRNPDLVATDP----TVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 317          
The following BLAST results are available for this feature:
BLAST of DY257795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI6_POPTR1.242e-7360.79Acidic endochitinase WIN6 OS=Populus trichocarpa G... [more]
CHI2_ORYSJ2.768e-7359.01Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIX_PEA3.060e-7258.82Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHI2_HORVU5.219e-7259.4626 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=... [more]
CHI1_ORYSJ8.903e-7256.05Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIC_SECCE1.163e-7158.56Basic endochitinase C OS=Secale cereale GN=rscc PE... [more]
CHID_SOLLC5.771e-7156.50Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHIA_SECCE1.679e-7058.56Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]
CHI4_SOLTU2.193e-7062.75Endochitinase 4 (Fragment) OS=Solanum tuberosum GN... [more]
CHI1_HORVU6.380e-7058.1126 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1CA03ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257795 ID=DY257795; Name=DY257795; organism=Citrus clementina; type=EST; length=839bp
CTTCTACACTTATGATGCTTTTATAGAGGCAGCCAAAGCTTTTCCAGCCT
TTGGTAACTCTGGAAATGAAACCATGCGTAAAAGAGAAATTGCTGCCTTT
TTTGCCCAAACTGGCCATGAAACTACTGGGGGATGGCCCGATGCACCTGG
TGGCGAATATGCTTGGGGATATTGCTTTAATAGGGAAGTTGGCGCTGCGT
CGTCCGACTACTGTGATCCTAACTATCCATGTCGAGGGAAGTACTATGGC
CGAGGTCCAATTCAACTCACTTGGAATTACAATTACTTACGGTGCGGAGA
AGGCCTAGGGCGAGGAGAGGACTTGTTGAACAATCCAGACCTTCTTGCTA
CTAATGATAAAGAAGGACGAGTACTATCATTCAAGTCGGCAATCTGGTTC
TGGATGACTGCACAGCCACCAAAGCCATCGTGCCACGAAGTCATTATCGA
CGAATGGAAACCATCAGCAAATGACGTAAACGCCGGCCGGCTTCCGGGAT
ACGGTCTAACCACAAATATAATCAACGGTGGAATTGAATGTGGCTACGGT
GGGAATGACGCTGTACGTAACCGTATTGGGTTCTTTACCACTTTCTGTGG
CAAGTTTGGGATTCAGCCTGGTGACAATCTTGATTGCTCCAACCAACGGC
CTTATGGCCTTAATCTGATGGCACAATCTATGTGATCATCATGATCAACG
TTTTAGTAAAATAGGCTTAATAAAAGCTACTTAATAAAAACTTTAGATGT
CACACTTGTAGGTGGACAACTAAACTGTTACGCTCTTATTGTAAGTAAAT
TAAATAAGACTGATCCAACATGGATCAATGAGTCTTCTC
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