DY257807

Overview
NameDY257807
Unique NameDY257807
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length753
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSI (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. indica GN=PDC3 PE=2 SV=2)

HSP 1 Score: 334.339 bits (856), Expect = 4.181e-91
Identity = 159/193 (82.38%), Postives = 174/193 (90.16%), Query Frame = 2
Query:    2 HIQKMLSSET--AVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 574
            HIQ+M+      AV+AETGDSWFNCQKL+LP+GCGYEFQMQYGSIGWSVGA LGYAQ+V +KRV+ACIGDGSFQVTAQDVSTMLRCGQ++IIFLINNGGYTIEVEIHDGPYNVIKNW+Y GLV+AIHNGEG+CW T+V CEEEL  AI  ATG K D LCFIEV+ HKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:  396 HIQRMIGGAEIGAVMAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGALLGYAQAV-QKRVVACIGDGSFQVTAQDVSTMLRCGQRSIIFLINNGGYTIEVEIHDGPYNVIKNWDYVGLVNAIHNGEGRCWATRVRCEEELEAAIATATGDKADSLCFIEVVAHKDDTSKELLEWGSRVSAANSRPPNPQ 587          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC2_MAIZE (Pyruvate decarboxylase isozyme 2 (Fragment) OS=Zea mays GN=PDC2 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.676e-50
Identity = 92/106 (86.79%), Postives = 97/106 (91.51%), Query Frame = 2
Query:  257 QKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 574
            Q +IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLV+A HNGEG C+T KV  EEEL EA+E A GPKKDCLCFIEV+VHKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct:    1 QNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVEAFHNGEGACYTAKVRTEEELTEALEAALGPKKDCLCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 106          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC1_TOBAC (Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nicotiana tabacum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.031e-49
Identity = 90/99 (90.91%), Postives = 95/99 (95.96%), Query Frame = 2
Query:    2 HIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYT 298
            HIQ MLS ++ VIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQ+ PEKRVIACIGDGSFQVTAQD+STMLRCGQ+TIIFLINNGGYT
Sbjct:  320 HIQNMLSGDSVVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQAAPEKRVIACIGDGSFQVTAQDISTMLRCGQRTIIFLINNGGYT 418          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC_ZYMMO (Pyruvate decarboxylase OS=Zymomonas mobilis GN=pdc PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.377e-48
Identity = 99/195 (50.77%), Postives = 129/195 (66.15%), Query Frame = 2
Query:    5 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIH------NGEGKCWTTKVFCE--EELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPP 565
            ++ +L+  T VIAETGDSWFN Q++KLP G   E++MQ+G IGWSV A  GYA   PE+R I  +GDGSFQ+TAQ+V+ M+R     IIFLINN GYTIEV IHDGPYN IKNW+Y GL++  +      +G GK    K   E  E +  A+ N  GP       IE  + ++D ++EL++WG RV+AANSR P
Sbjct:  374 VEALLTPNTTVIAETGDSWFNAQRMKLPNGARVEYEMQWGHIGWSVPAAFGYAVGAPERRNILMVGDGSFQLTAQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNNIKNWDYAGLMEVFNGNGGYDSGAGKGLKAKTGGELAEAIKVALANTDGP-----TLIECFIGREDCTEELVKWGKRVAAANSRKP 563          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC3_SCHPO (Probable pyruvate decarboxylase C186.09 OS=Schizosaccharomyces pombe GN=SPAC186.09 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.255e-47
Identity = 93/191 (48.69%), Postives = 123/191 (64.40%), Query Frame = 2
Query:    5 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAI----ENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPP 565
            +Q +++ ET +  +TGDSWF   ++ LP+   +E +MQ+G IGWSV +  GYA   P++ V+  +GDGSFQ T Q+VS M+R     I+FLINN GYTIEVEIHDGPYN IKNW+Y  +V+A + GEG     +V    EL EAI    EN+ GP       IE  + +DD SKEL+ WG  V AAN +PP
Sbjct:  384 VQNLVNQETTLFVDTGDSWFGGMRITLPEKARFEIEMQWGHIGWSVPSAFGYAIGAPKRNVVVFVGDGSFQETVQEVSQMVRLNLPIIMFLINNRGYTIEVEIHDGPYNRIKNWDYAAIVEAFNAGEGHAKGFRVGNGHELAEAIRQAKENSQGP-----TLIECNIDQDDCSKELINWGHNVGAANGKPP 569          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC_NEUCR (Pyruvate decarboxylase OS=Neurospora crassa GN=cfp PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.988e-46
Identity = 94/187 (50.27%), Postives = 124/187 (66.31%), Query Frame = 2
Query:    5 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPP 565
            +Q+ML+ +T++  +TGDSWFN  +LKLP G  +E +MQ+G IGWS+ A  GYA   P++  I  +GDGSFQVTAQ+VS M+R      I LINN GYTIEVEIHDG YN IKNW+Y  LV+A ++ +G           EL +AI+ A    K+    IE  + +DD SKEL+ WG  V+AAN+RPP
Sbjct:  378 VQEMLTDKTSLFVDTGDSWFNGIQLKLPPGAKFEIEMQWGHIGWSIPAAFGYALRHPDRHTIVLVGDGSFQVTAQEVSQMVRFKVPITIMLINNRGYTIEVEIHDGSYNKIKNWDYAMLVEAFNSTDGHAKGLLANTAGELADAIKVAES-HKEGPTLIECTIDQDDCSKELITWGHYVAAANARPP 563          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC2_SCHPO (Probable pyruvate decarboxylase C1F8.07c OS=Schizosaccharomyces pombe GN=SPAC1F8.07c PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.557e-45
Identity = 87/187 (46.52%), Postives = 125/187 (66.84%), Query Frame = 2
Query:    5 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPP 565
            IQ ++ S T + AETGDSWFN  ++KLP G  +E +MQ+G IGWSV + +GYA + PE+R I  +GDGSFQ+T Q++S M+R     +IFL+NN GYTIE++IHDGPYN I+NW++    ++++   GK         EEL  AI+ A    K+    IE  +  DD ++EL++WG  V++AN+RPP
Sbjct:  380 IQGLVDSNTTLYAETGDSWFNGLQMKLPAGAKFEVEMQWGHIGWSVPSAMGYAVAAPERRTIVMVGDGSFQLTGQEISQMIRHKLPVLIFLLNNRGYTIEIQIHDGPYNRIQNWDFAAFCESLNGETGKAKGLHAKTGEELTSAIKVAL-QNKEGPTLIECAIDTDDCTQELVDWGKAVASANARPP 565          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC6_YEAST (Pyruvate decarboxylase isozyme 3 OS=Saccharomyces cerevisiae GN=PDC6 PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 9.190e-22
Identity = 69/192 (35.94%), Postives = 101/192 (52.60%), Query Frame = 2
Query:    5 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGP---YNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 559
            + K L     +I+ETG S F   +   PK      Q+ +GSIG++ GATLG A +     P KRVI  IGDGS Q+T Q++STM+R G K  +F++NN GYTIE  IH GP   YN I+ W++  L+ A   G  K    K+    E      ++   K   +  IE+ +   D  + L++     +A N++
Sbjct:  374 LSKFLQEGDVIISETGTSAFGINQTIFPKDAYGISQVLWGSIGFTTGATLGAAFAAEEIDPNKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIEKLIH-GPHAEYNEIQTWDHLALLPAF--GAKKYENHKIATTGEWDALTTDSEFQKNSVIRLIELKLPVFDAPESLIKQAQLTAATNAK 562          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC5_YEAST (Pyruvate decarboxylase isozyme 2 OS=Saccharomyces cerevisiae GN=PDC5 PE=1 SV=4)

HSP 1 Score: 102.449 bits (254), Expect = 2.674e-21
Identity = 69/193 (35.75%), Postives = 100/193 (51.81%), Query Frame = 2
Query:    2 HIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGP---YNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 559
            H+   L     VIAETG S F   +   P       Q+ +GSIG++VGA LG   +     P+KRVI  IGDGS Q+T Q++STM+R G K  IF++NN GYTIE  IH GP   YN I+ W++  L+     G     T +V    E  +  ++        +  IEV++   D  + L++     +A N++
Sbjct:  373 HLGNFLREGDIVIAETGTSAFGINQTTFPTDVYAIVQVLWGSIGFTVGALLGATMAAEELDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYIFVLNNNGYTIEKLIH-GPHAEYNEIQGWDHLALLPTF--GARNYETHRVATTGEWEKLTQDKDFQDNSKIRMIEVMLPVFDAPQNLVKQAQLTAATNAK 562          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC1_YEAST (Pyruvate decarboxylase isozyme 1 OS=Saccharomyces cerevisiae GN=PDC1 PE=1 SV=7)

HSP 1 Score: 101.293 bits (251), Expect = 5.957e-21
Identity = 68/188 (36.17%), Postives = 100/188 (53.19%), Query Frame = 2
Query:   17 LSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGP---YNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 559
            L     VIAETG S F   +   P       Q+ +GSIG++ GATLG A +     P+KRVI  IGDGS Q+T Q++STM+R G K  +F++NN GYTIE  IH GP   YN I+ W++  L+     G     T +V    E  +  ++ +      +  IE+++   D  + L+E     +A N++
Sbjct:  378 LQEGDVVIAETGTSAFGINQTTFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIEKLIH-GPKAQYNEIQGWDHLSLLPTF--GAKDYETHRVATTGEWDKLTQDKSFNDNSKIRMIEIMLPVFDAPQNLVEQAKLTAATNAK 562          
The following BLAST results are available for this feature:
BLAST of DY257807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PDC3_ORYSI4.181e-9182.38Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]
PDC2_MAIZE4.676e-5086.79Pyruvate decarboxylase isozyme 2 (Fragment) OS=Zea... [more]
PDC1_TOBAC3.031e-4990.91Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nic... [more]
PDC_ZYMMO4.377e-4850.77Pyruvate decarboxylase OS=Zymomonas mobilis GN=pdc... [more]
PDC3_SCHPO8.255e-4748.69Probable pyruvate decarboxylase C186.09 OS=Schizos... [more]
PDC_NEUCR6.988e-4650.27Pyruvate decarboxylase OS=Neurospora crassa GN=cfp... [more]
PDC2_SCHPO1.557e-4546.52Probable pyruvate decarboxylase C1F8.07c OS=Schizo... [more]
PDC6_YEAST9.190e-2235.94Pyruvate decarboxylase isozyme 3 OS=Saccharomyces ... [more]
PDC5_YEAST2.674e-2135.75Pyruvate decarboxylase isozyme 2 OS=Saccharomyces ... [more]
PDC1_YEAST5.957e-2136.17Pyruvate decarboxylase isozyme 1 OS=Saccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1CD01ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257807 ID=DY257807; Name=DY257807; organism=Citrus clementina; type=EST; length=753bp
ACATATACAGAAGATGCTGTCTAGTGAAACTGCTGTGATTGCTGAGACAG
GGGACTCTTGGTTTAACTGCCAGAAACTGAAATTGCCTAAGGGATGCGGG
TATGAGTTCCAAATGCAATATGGATCAATTGGTTGGTCTGTTGGTGCTAC
TCTTGGATATGCACAGTCTGTGCCAGAGAAGCGTGTCATTGCTTGCATAG
GTGATGGTAGCTTCCAGGTAACTGCACAAGATGTGTCAACAATGCTGCGA
TGTGGGCAGAAGACTATAATCTTCCTGATTAACAATGGTGGTTACACCAT
TGAAGTTGAGATCCATGATGGACCGTACAATGTGATCAAGAACTGGAACT
ACACCGGGTTGGTTGATGCAATCCACAATGGCGAAGGCAAGTGCTGGACA
ACCAAGGTCTTCTGCGAGGAGGAGCTCATCGAAGCCATTGAGAACGCTAC
TGGACCCAAGAAGGATTGCTTGTGCTTCATTGAAGTACTTGTTCACAAGG
ATGATACAAGCAAAGAGCTTTTGGAATGGGGCTCCAGGGTCTCCGCTGCC
AATAGCCGCCCACCAAATCCTCAGTAGATATGAGGCGGCTCATATTGCAA
ATTGCACTCTACTACCATTTATAGCCAAATTAAATGCGCGCATGTCTTTT
CTGTGGTTACTTTACTAAGTTTTGGGTATTTTGAACTATTTGCTGGTTTC
TAATGTAAATTCATTTTAAAATTTAATATCTACTAAATCCTCTCCATTGC
TTC
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