DY257807

Overview
NameDY257807
Unique NameDY257807
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length753
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: KDC_MYCS2 (Alpha-keto-acid decarboxylase OS=Mycobacterium smegmatis GN=kdc PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.864e-15
Identity = 55/187 (29.41%), Postives = 94/187 (50.27%), Query Frame = 2
Query:    5 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 559
            + + L+    V+A+ G S++     +L  G  +  Q  + SIG+++ A LG   +  ++R +  IGDG+ Q+T Q++    R G   ++ ++NN GYT+E  IH     YN I  W +T L  A+  G     T +     EL +A+       +D + F+EV++ + D    L E     SAAN++
Sbjct:  372 LAEALTPGNVVLADQGTSFYGLAGHRLASGVTFIGQPLWASIGYTLPAALGAGLADRDRRTVLLIGDGAAQLTVQELGAFGREGLTPVVVVVNNNGYTVERAIHGVTARYNDITAWRWTELPAAL--GVPDALTFRCATYGELDDAL-TVAAETQDRMVFVEVMLERMDIPPLLGELAQSASAANAK 555          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC_ASPPA (Pyruvate decarboxylase OS=Aspergillus parasiticus GN=pdcA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 57/180 (31.67%), Postives = 83/180 (46.11%), Query Frame = 2
Query:   35 VIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLG--YAQ----------SVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVD---AIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELL 523
            ++ ETG   +      LP          + SIG+ + A LG  +AQ          S+   R I  IGDGSFQ+T Q++ST++      IIFLINN GYTIE  IH  +  YN +  W Y    +   A  +GE K  T +V    +L   + ++       L  +EV + + D    L+
Sbjct:  382 ILGETGTPGYGVNDFILPPQTRLFKPATWLSIGYMLPAALGASHAQRDLVASDQYHSLSNPRTILFIGDGSFQMTVQELSTIIHQKLNVIIFLINNDGYTIERCIHGRNQAYNDVAPWRYLKAAEFFGADQDGEYKASTWEVRTWADLDRVLNDSQLADGKGLRMVEVFMERLDAPDVLM 561          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: ARO10_YEAST (Transaminated amino acid decarboxylase OS=Saccharomyces cerevisiae GN=ARO10 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 56/193 (29.02%), Postives = 95/193 (49.22%), Query Frame = 2
Query:   11 KMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEK----------------RVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGP---YNVIKNWNYTGLVDAIHNGEGKCW-TTKVFCEEEL---IEAIENATGPKKDCLCFIEVLVHKDDTSKEL 520
            K L+    V+ ETG   F+ +    P    Y  Q  + SIG ++ A LG   ++ +                 R+I   GDG+ Q+T Q++ST+L+C     + + NN GYTIE  I  GP   YN + +W +T L +A  + +GK   +T + C  +L   +E ++N+   K+  +  +EV + + D  ++L
Sbjct:  432 KFLNPGDVVVCETGSFQFSVRDFAFPSQLKYISQGFFLSIGMALPAALGVGIAMQDHSNAHINGGNVKEDYKPRLILFEGDGAAQMTIQELSTILKCNIPLEVIIWNNNGYTIERAIM-GPTRSYNDVMSWKWTKLFEAFGDFDGKYTNSTLIQCPSKLALKLEELKNSN--KRSGIELLEVKLGELDFPEQL 621          
The following BLAST results are available for this feature:
BLAST of DY257807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
KDC_MYCS22.864e-1529.41Alpha-keto-acid decarboxylase OS=Mycobacterium sme... [more]
PDC_ASPPA4.279e-1131.67Pyruvate decarboxylase OS=Aspergillus parasiticus ... [more]
ARO10_YEAST4.279e-1129.02Transaminated amino acid decarboxylase OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1CD01ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257807 ID=DY257807; Name=DY257807; organism=Citrus clementina; type=EST; length=753bp
ACATATACAGAAGATGCTGTCTAGTGAAACTGCTGTGATTGCTGAGACAG
GGGACTCTTGGTTTAACTGCCAGAAACTGAAATTGCCTAAGGGATGCGGG
TATGAGTTCCAAATGCAATATGGATCAATTGGTTGGTCTGTTGGTGCTAC
TCTTGGATATGCACAGTCTGTGCCAGAGAAGCGTGTCATTGCTTGCATAG
GTGATGGTAGCTTCCAGGTAACTGCACAAGATGTGTCAACAATGCTGCGA
TGTGGGCAGAAGACTATAATCTTCCTGATTAACAATGGTGGTTACACCAT
TGAAGTTGAGATCCATGATGGACCGTACAATGTGATCAAGAACTGGAACT
ACACCGGGTTGGTTGATGCAATCCACAATGGCGAAGGCAAGTGCTGGACA
ACCAAGGTCTTCTGCGAGGAGGAGCTCATCGAAGCCATTGAGAACGCTAC
TGGACCCAAGAAGGATTGCTTGTGCTTCATTGAAGTACTTGTTCACAAGG
ATGATACAAGCAAAGAGCTTTTGGAATGGGGCTCCAGGGTCTCCGCTGCC
AATAGCCGCCCACCAAATCCTCAGTAGATATGAGGCGGCTCATATTGCAA
ATTGCACTCTACTACCATTTATAGCCAAATTAAATGCGCGCATGTCTTTT
CTGTGGTTACTTTACTAAGTTTTGGGTATTTTGAACTATTTGCTGGTTTC
TAATGTAAATTCATTTTAAAATTTAATATCTACTAAATCCTCTCCATTGC
TTC
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