DY257827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_BACSK (tRNA-specific 2-thiouridylase mnmA OS=Bacillus clausii (strain KSM-K16) GN=mnmA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11 Identity = 40/128 (31.25%), Postives = 63/128 (49.22%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGG--PWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVI 378 G +YT+GQRQGL + G PW+V++KD++ NV+ V + Y+ + W++ E S CK + + + + EDG A +Q + + + GQ Y+G RCIG GVI Sbjct: 234 GLMYYTLGQRQGLGIGGAGEPWFVIDKDLERNVLIVGQGYHHPGLYSDGLWATDMNWIA--KEERTSPFTCKAKFRYRQEDQGVTVFPKEDGR---AFIQFDQPQRAITPGQAVVLYEGDRCIGGGVI 356
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_CHLAB (tRNA-specific 2-thiouridylase mnmA OS=Chlamydophila abortus GN=mnmA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 42/128 (32.81%), Postives = 65/128 (50.78%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGG--PWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVI 378 G +YTIGQR+GL + G P YVV KD++ N+V++ R ++ L W + PE I+R KVR+ C ++ G ++ V+ + + + GQ AFY G RC+G G+I Sbjct: 232 GAHYYTIGQRRGLDIGGSEKPCYVVGKDMEKNIVYIVRGEDHPLLYQQELTAKELNWF--VSPESITRCSAKVRYRSPDEECEIL----HTGTQDTVRVRFTSPVKAITPGQTIAFYDGERCLGGGII 353
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_ALCBS (tRNA-specific 2-thiouridylase mnmA OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=mnmA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 42/135 (31.11%), Postives = 61/135 (45.19%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPG------GPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVILES 387 G +YT+GQRQGL + G PWYV +KD++ NV+ + R+ ++W++ P +RL K R+ C V D GE V E + + GQ FY G C+G VI E+ Sbjct: 234 GLMYYTLGQRQGLGIGGLASASEAPWYVAKKDLERNVLIAVQGTDHPLLYSRVLNSAPMQWVALEAPALPARLTAKTRYRQPDQGCT-----VSDAGEGRVTVTFDEPQRAVTPGQSVVFYDGPVCLGGAVIEET 363
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_NITEU (tRNA-specific 2-thiouridylase mnmA OS=Nitrosomonas europaea GN=mnmA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11 Identity = 44/137 (32.12%), Postives = 63/137 (45.99%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGG------PWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVILESWD 393 G +YTIGQRQGL + G PW+V KD+K NV++V + + R L W+SG PP + K+R+ C I H E + + + G+ GQ Y+ C+G GVI+ S D Sbjct: 231 GVMYYTIGQRQGLGIGGTRQGSEQPWFVSGKDIKKNVLYVVQGHDHPALLRSSLTAADLSWISGTPPHQNWVYAAKIRYRQTDAPC--AITHFE---HDSCQIGFAAPQWGITPGQSVVVYESKVCLGGGVIIGSND 362
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_FRATW (tRNA-specific 2-thiouridylase mnmA OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=mnmA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11 Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRL------PGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVIL 381 G +YTIGQRQGL + P PW+ +KD++NNV+ + + ++ + L W++G+ P + R KVR+ +C +E +DG N V + + + GQ FY C+G GVI+ Sbjct: 232 GLMYYTIGQRQGLGIGGVKDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIELSWVAGMAPADKFRCAAKVRYRQKDQSCE--VEVNQDGSVN---VTFDQPQRAITPGQSVVFYIDDVCLGGGVII 359
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_FRATT (tRNA-specific 2-thiouridylase mnmA OS=Francisella tularensis subsp. tularensis GN=mnmA PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11 Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRL------PGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVIL 381 G +YTIGQRQGL + P PW+ +KD++NNV+ + + ++ + L W++G+ P + R KVR+ +C +E +DG N V + + + GQ FY C+G GVI+ Sbjct: 232 GLMYYTIGQRQGLGIGGVKDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIELSWVAGMAPADKFRCAAKVRYRQKDQSCE--VEVNQDGSVN---VTFDQPQRAITPGQSVVFYIDDVCLGGGVII 359
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_FRATO (tRNA-specific 2-thiouridylase mnmA OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=mnmA PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11 Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRL------PGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVIL 381 G +YTIGQRQGL + P PW+ +KD++NNV+ + + ++ + L W++G+ P + R KVR+ +C +E +DG N V + + + GQ FY C+G GVI+ Sbjct: 232 GLMYYTIGQRQGLGIGGVKDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIELSWVAGMAPADKFRCAAKVRYRQKDQSCE--VEVNQDGSVN---VTFDQPQRAITPGQSVVFYIDDVCLGGGVII 359
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_FRATN (tRNA-specific 2-thiouridylase mnmA OS=Francisella tularensis subsp. novicida (strain U112) GN=mnmA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11 Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRL------PGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVIL 381 G +YTIGQRQGL + P PW+ +KD++NNV+ + + ++ + L W++G+ P + R KVR+ +C +E +DG N V + + + GQ FY C+G GVI+ Sbjct: 232 GLMYYTIGQRQGLGIGGVKDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIELSWVAGMAPADKFRCAAKVRYRQKDQSCE--VEVNQDGSVN---VTFDQPQRAITPGQSVVFYIDDVCLGGGVII 359
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_FRATM (tRNA-specific 2-thiouridylase mnmA OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=mnmA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11 Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRL------PGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVIL 381 G +YTIGQRQGL + P PW+ +KD++NNV+ + + ++ + L W++G+ P + R KVR+ +C +E +DG N V + + + GQ FY C+G GVI+ Sbjct: 232 GLMYYTIGQRQGLGIGGVKDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIELSWVAGMAPADKFRCAAKVRYRQKDQSCE--VEVNQDGSVN---VTFDQPQRAITPGQSVVFYIDDVCLGGGVII 359
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_FRATH (tRNA-specific 2-thiouridylase mnmA OS=Francisella tularensis subsp. holarctica (strain LVS) GN=mnmA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11 Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRL------PGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVIL 381 G +YTIGQRQGL + P PW+ +KD++NNV+ + + ++ + L W++G+ P + R KVR+ +C +E +DG N V + + + GQ FY C+G GVI+ Sbjct: 232 GLMYYTIGQRQGLGIGGVKDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIELSWVAGMAPADKFRCAAKVRYRQKDQSCE--VEVNQDGSVN---VTFDQPQRAITPGQSVVFYIDDVCLGGGVII 359 The following BLAST results are available for this feature:
BLAST of DY257827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257827 ID=DY257827; Name=DY257827; organism=Citrus clementina; type=EST; length=716bpback to top |