DY257855
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-18 Identity = 49/140 (35.00%), Postives = 77/140 (55.00%), Query Frame = 2 Query: 68 RNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 484 + + A RI K++ +L P +C DD+ +++ I P + GG F+ S YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + +R +E Sbjct: 25 KKASAAQLRIQKDITELNL--PKTCEIEFSDHDDLLNFKLVIC-PDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-18 Identity = 53/169 (31.36%), Postives = 85/169 (50.30%), Query Frame = 2 Query: 23 VK*HQTQTLRPQSLLRNSQMASK-----------RINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTAR 496 +K Q Q + Q L +N+ + K R+ K++++L+ P + + + I+ P + GG F + F YP PPKV K+FHPNI+ +G ICL+IL+E WSPAL + ++L + SL +PN +DPL E A + D+ ++ R Sbjct: 2 LKLRQLQQQKQQQLAKNAGSSVKANTNSTSPAKLRLQKDIEELELPPTVRVNIISLDNHKEMSLNIIIIPDEGFYKGGKFRFTATFLETYPIDPPKVICNNKIFHPNIDPHGKICLNILREDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAEVLNKDKLEFGNLVR 170
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18 Identity = 49/149 (32.89%), Postives = 79/149 (53.02%), Query Frame = 2 Query: 68 RNSQMASKRINKELKDLQKD-----PPASCSAG-PVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTAR 496 ++S+ SKR N QKD P C+ +D+ ++ +I P++ + F +I+ P YP+ PPKV T V+HPNI+ G +CL+IL++ W P L I V+ + +L +PNPDDPL + A + ++ +E R Sbjct: 66 QSSESGSKRANPAELRAQKDIDEMEVPTGCAVSFKDTNDILNFNLSIT-PTDGLYQSATFQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNKKTFEANVR 213
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18 Identity = 48/140 (34.29%), Postives = 76/140 (54.29%), Query Frame = 2 Query: 68 RNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 484 + + A RI K++ +L P +C DD+ +++ I P + G F+ S YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + +R +E Sbjct: 25 KKASAAQLRIQKDINELNL--PKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18 Identity = 48/140 (34.29%), Postives = 76/140 (54.29%), Query Frame = 2 Query: 68 RNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 484 + + A RI K++ +L P +C DD+ +++ I P + G F+ S YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + +R +E Sbjct: 25 KKASAAQLRIQKDINELNL--PKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18 Identity = 48/140 (34.29%), Postives = 76/140 (54.29%), Query Frame = 2 Query: 68 RNSQMASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 484 + + A RI K++ +L P +C DD+ +++ I P + G F+ S YP PPKV T V+HPNI+ G++CL+IL+E W P LTI+ ++ + L +PNP+DPL E A + + +R +E Sbjct: 25 KKASAAQLRIQKDINELNL--PKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFE 161
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18 Identity = 47/148 (31.76%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 80 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 517 M+S +E+ DL K + + D M + GP +S + GGV+ V + YP+K P + F K++HPN++ +GS+CLD++ + WSP + + + + LL PNP DPL E A + D+ YE + + ++YA Sbjct: 1 MSSPSKRREM-DLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVKEYCERYA 147
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18 Identity = 48/154 (31.17%), Postives = 80/154 (51.95%), Query Frame = 2 Query: 35 QTQTLRPQSLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTAR 496 Q+ R S ++ R++K++ +L S +D+ +++ TI P + G F+ S YP + PKV +TKV+HPNI+ G++CL+IL+E W P L I+ V+ + L T+PN +DPL E A + + + +E R Sbjct: 16 QSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDLMNFEVTIK-PDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVR 168
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBCX_PICAN (Ubiquitin-conjugating enzyme E2-21 kDa OS=Pichia angusta GN=PEX4 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.391e-18 Identity = 50/146 (34.25%), Postives = 73/146 (50.00%), Query Frame = 2 Query: 152 PVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRT----------------------KVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK-TDRAKYETTARSWTQKYA 517 P+ D +F W A I GP SPF ++ + I P +YP PPK+ F K+ HPN+N G ICLDIL+++WSPA T+ L++I LL +P P PL ++A++ K D Y+ + KY+ Sbjct: 36 PLEDGLFRWSAVIRGPDQSPFEDALWKLEIDIPTNYPLDPPKIKFVVFGEEKIRQLQRKTSSGARKVCYKMPHPNVNFKTGEICLDILQQKWSPAWTLQSALVAIVVLLANPEPLSPLNIDMANLLKCDDTTAYKDLVHYYIAKYS 181
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UB2L6_MOUSE (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Mus musculus GN=Ube2l6 PE=2 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 5.391e-18 Identity = 49/149 (32.89%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 80 MASKRINKELKDLQKD-PPASCSAGPVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 520 MASKR+ KEL+ L K+ PP ++ W ++ P P+ F V I FP +YPFKPP + F TK++HPN+ +G +CL ++ E W P +VL ++ L++ PN ++P+ E+A + + + A +T K+ + Sbjct: 2 MASKRVAKELESLSKELPPYLRQLSSDDANVLVWHMLLL-PDQLPYGLKAFQVRIDFPREYPFKPPTLRFTTKIYHPNVREDGLVCLPLISNENWKPYTKPYQVLEALNVLVSKPNLEEPVRLELADLLTQNPEMFRKKAEEFTLKFGV 149 The following BLAST results are available for this feature:
BLAST of DY257855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257855 ID=DY257855; Name=DY257855; organism=Citrus clementina; type=EST; length=815bpback to top |