DY257855
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UB2FB_MOUSE (NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.056e-14 Identity = 48/157 (30.57%), Postives = 71/157 (45.22%), Query Frame = 2 Query: 68 RNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 517 R M K + E+ +L+ + P +C + H + P + GG F I P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DPL E A + D+ + + ++YA Sbjct: 28 RRFSMRDKLLVTEVAELEANLPWTCKVHFPDPNKLHCFQLTVSPDEGYYQGGNFQFEIEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSADGTGWAPTRTLKDVVWGLNSLFTDLLNFYDPLNIEAAEHHLQDKEDFRDKVDEYIRRYA 184
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBC32_ARATH (Ubiquitin carrier protein E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.795e-13 Identity = 40/117 (34.19%), Postives = 64/117 (54.70%), Query Frame = 2 Query: 83 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 421 A KRI +E+K++Q +P + P+ +++F WQ I GP ++ F GG++ I P DYPFKPP T + +N ICL I E W P+ ++ L+++ + + T PN Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTP--NGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTSPN 126
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBCX_YEAST (Ubiquitin-conjugating enzyme E2-21 kDa OS=Saccharomyces cerevisiae GN=PEX4 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.344e-13 Identity = 51/153 (33.33%), Postives = 79/153 (51.63%), Query Frame = 2 Query: 74 SQMASKRINKE----LKDLQKDPPASC-------SAGPVAD-DMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAF-RTKVFHPNINS-NGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DRAKYE 484 S RI KE LK L D P + S P+ + D+ W+A I GPS++P+ F + I P YP PPK++F + + H N+ S G ICL+ILK E+W+P + + ++ LL +P D PL +I ++ + D + Y+ Sbjct: 15 SDTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQ 167
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.344e-13 Identity = 40/134 (29.85%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 74 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT 466 ++ A KR+ KE K + ++PP A P D++ W I GP+++P+ GG + ++ FP DYP+KPP + T + N +CL D + W+P ++S +L + S +T + H KT Sbjct: 3 TKQAHKRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMITP--NGRFKPNTRLCLSMSDYHPDTWNPGWSVSTILNGLLSFMTSDEATTGSITTSDHQKKT 134
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBCX_PICPA (Ubiquitin-conjugating enzyme E2-24 kDa OS=Pichia pastoris GN=PEX4 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.222e-13 Identity = 54/194 (27.84%), Postives = 87/194 (44.85%), Query Frame = 2 Query: 83 ASKRINKELKDLQKDPPASCSAG-----------PVADDMFH-WQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRT----------------------------------KVFHPNINSN-GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK-TDRAKYETTARSWTQKYAM 520 A KR+ +E + + K+ SA PV++D F+ W A + GP+++ + + + I P +YP +PPK F ++ HPNI N G ICLDIL+ +W+PA T+S L +I LL DP P PL ++A++ K D Y + + +Y++ Sbjct: 3 AEKRLLQEYRSILKEQRQKGSASTLSSNGILDLKPVSEDNFYKWTAKLKGPTDTGYQDAFWELQIDIPSNYPTQPPKFTFIVSDDIPRNRRQRQTNQIQDDDEFEGAEKEVLRHCYRMPHPNIAFNTGEICLDILQAKWTPAWTLSSALTAIVLLLNDPEPLSPLDIDMANLMKINDLKAYNSLIEYYVGRYSI 196
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBC6_ASHGO (Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii GN=UBC6 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.820e-13 Identity = 43/145 (29.66%), Postives = 70/145 (48.28%), Query Frame = 2 Query: 74 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARS 499 S+ A KR++KE K + ++PP A P D++ W I GP +P+ G + ++ FP DYPF PP + T + N +CL D + W+P+ +++ +L + S +T I M TD K + A+S Sbjct: 3 SRQAYKRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTLVFPNDYPFNPPAIRMLTP--NGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMTTDE------SSIGTMESTDSTKRKYAAKS 139
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.907e-13 Identity = 38/116 (32.76%), Postives = 60/116 (51.72%), Query Frame = 2 Query: 74 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 412 S A+KR+ KE K++ +PP A P D++ W I GP ++P+ G + ++ FP DYPF PP + T + N +CL D E W+PA ++ +L + S +T Sbjct: 3 SIQANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMITP--NGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFMT 116
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBC6_DEBHA (Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii GN=UBC6 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.519e-12 Identity = 37/116 (31.90%), Postives = 62/116 (53.45%), Query Frame = 2 Query: 74 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 412 S+ + KR+ KE K + +PP SA P +++ W I GP ++PF G + + FP +YPFKPP ++ T + N +CL D + W+PA +++ +L + S +T Sbjct: 3 SRQSQKRLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKPPSISMITP--NGRFACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFMT 116
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UBC6_CANGA (Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata GN=UBC6 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.421e-12 Identity = 35/116 (30.17%), Postives = 62/116 (53.45%), Query Frame = 2 Query: 74 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 412 ++ A KR+ KE K + ++PP A P +++ W I GP ++P+ GG + ++ FP DYP+KPP + T + N +CL D + W+P +++ +L + S +T Sbjct: 3 TKQAQKRLTKEYKMMVENPPPFIIARPNEENILEWHYVISGPPDTPYDGGQYHGTLTFPSDYPYKPPAIRMITP--NGRFKENTRLCLSMSDYHPDTWNPGWSVATILNGLLSFMT 116
BLAST of DY257855 vs. ExPASy Swiss-Prot
Match: UB2J1_MOUSE (Ubiquitin-conjugating enzyme E2 J1 OS=Mus musculus GN=Ube2j1 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.421e-12 Identity = 42/112 (37.50%), Postives = 57/112 (50.89%), Query Frame = 2 Query: 83 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSNSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLL 409 A KR+ KE +L KDP A P+ D++F W T+ GP +S F GGV+ I PP+YP KPP + T + ICL I E W P+ +I LL+I + Sbjct: 11 AVKRLMKEAAEL-KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTA--NGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFM 119 The following BLAST results are available for this feature:
BLAST of DY257855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257855 ID=DY257855; Name=DY257855; organism=Citrus clementina; type=EST; length=815bpback to top |