DY257874
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257874 vs. ExPASy Swiss-Prot
Match: RL3_STRZP (50S ribosomal protein L3 OS=Streptococcus pneumoniae (strain P1031) GN=rplC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.387e-24 Identity = 57/161 (35.40%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 G++ K G+T + + G IPV+V+ N+V QVKT E +G+ ++QVG K++ KP GH KR +REF E L +G + V F G VD+ R G P +HG S HR GS G AP +VFKGK G Sbjct: 4 GILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNVEG--LEVGAEITVETFAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VAPNRVFKGKNLAG 160 HSP 2 Score: 48.1358 bits (113), Expect = 5.387e-24 Identity = 20/50 (40.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+ + GRMGG + T++N+ V ++ P +N++ ++G VPGA + + IK AV Sbjct: 155 GKNLAGRMGGDRVTIQNLEVVQVVPEKNVILIKGNVPGAKKSLITIKSAV 204
BLAST of DY257874 vs. ExPASy Swiss-Prot
Match: RL3_STRZJ (50S ribosomal protein L3 OS=Streptococcus pneumoniae (strain JJA) GN=rplC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.387e-24 Identity = 57/161 (35.40%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 G++ K G+T + + G IPV+V+ N+V QVKT E +G+ ++QVG K++ KP GH KR +REF E L +G + V F G VD+ R G P +HG S HR GS G AP +VFKGK G Sbjct: 4 GILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNVEG--LEVGAEITVETFAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VAPNRVFKGKNLAG 160 HSP 2 Score: 48.1358 bits (113), Expect = 5.387e-24 Identity = 20/50 (40.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+ + GRMGG + T++N+ V ++ P +N++ ++G VPGA + + IK AV Sbjct: 155 GKNLAGRMGGDRVTIQNLEVVQVVPEKNVILIKGNVPGAKKSLITIKSAV 204
BLAST of DY257874 vs. ExPASy Swiss-Prot
Match: RL3_STRR6 (50S ribosomal protein L3 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=rplC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.387e-24 Identity = 57/161 (35.40%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 G++ K G+T + + G IPV+V+ N+V QVKT E +G+ ++QVG K++ KP GH KR +REF E L +G + V F G VD+ R G P +HG S HR GS G AP +VFKGK G Sbjct: 4 GILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNVEG--LEVGAEITVETFAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VAPNRVFKGKNLAG 160 HSP 2 Score: 48.1358 bits (113), Expect = 5.387e-24 Identity = 20/50 (40.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+ + GRMGG + T++N+ V ++ P +N++ ++G VPGA + + IK AV Sbjct: 155 GKNLAGRMGGDRVTIQNLEVVQVVPEKNVILIKGNVPGAKKSLITIKSAV 204
BLAST of DY257874 vs. ExPASy Swiss-Prot
Match: RL3_STRPS (50S ribosomal protein L3 OS=Streptococcus pneumoniae (strain CGSP14) GN=rplC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.387e-24 Identity = 57/161 (35.40%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 G++ K G+T + + G IPV+V+ N+V QVKT E +G+ ++QVG K++ KP GH KR +REF E L +G + V F G VD+ R G P +HG S HR GS G AP +VFKGK G Sbjct: 4 GILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNVEG--LEVGAEITVETFAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VAPNRVFKGKNLAG 160 HSP 2 Score: 48.1358 bits (113), Expect = 5.387e-24 Identity = 20/50 (40.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+ + GRMGG + T++N+ V ++ P +N++ ++G VPGA + + IK AV Sbjct: 155 GKNLAGRMGGDRVTIQNLEVVQVVPEKNVILIKGNVPGAKKSLITIKSAV 204
BLAST of DY257874 vs. ExPASy Swiss-Prot
Match: RL3_STRPN (50S ribosomal protein L3 OS=Streptococcus pneumoniae GN=rplC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.387e-24 Identity = 57/161 (35.40%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 G++ K G+T + + G IPV+V+ N+V QVKT E +G+ ++QVG K++ KP GH KR +REF E L +G + V F G VD+ R G P +HG S HR GS G AP +VFKGK G Sbjct: 4 GILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNVEG--LEVGAEITVETFAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VAPNRVFKGKNLAG 160 HSP 2 Score: 48.1358 bits (113), Expect = 5.387e-24 Identity = 20/50 (40.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+ + GRMGG + T++N+ V ++ P +N++ ++G VPGA + + IK AV Sbjct: 155 GKNLAGRMGGDRVTIQNLEVVQVVPEKNVILIKGNVPGAKKSLITIKSAV 204
BLAST of DY257874 vs. ExPASy Swiss-Prot
Match: RL3_STRPJ (50S ribosomal protein L3 OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=rplC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.387e-24 Identity = 57/161 (35.40%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 G++ K G+T + + G IPV+V+ N+V QVKT E +G+ ++QVG K++ KP GH KR +REF E L +G + V F G VD+ R G P +HG S HR GS G AP +VFKGK G Sbjct: 4 GILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNVEG--LEVGAEITVETFAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VAPNRVFKGKNLAG 160 HSP 2 Score: 48.1358 bits (113), Expect = 5.387e-24 Identity = 20/50 (40.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+ + GRMGG + T++N+ V ++ P +N++ ++G VPGA + + IK AV Sbjct: 155 GKNLAGRMGGDRVTIQNLEVVQVVPEKNVILIKGNVPGAKKSLITIKSAV 204
BLAST of DY257874 vs. ExPASy Swiss-Prot
Match: RL3_STRPI (50S ribosomal protein L3 OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=rplC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.387e-24 Identity = 57/161 (35.40%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 G++ K G+T + + G IPV+V+ N+V QVKT E +G+ ++QVG K++ KP GH KR +REF E L +G + V F G VD+ R G P +HG S HR GS G AP +VFKGK G Sbjct: 4 GILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNVEG--LEVGAEITVETFAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VAPNRVFKGKNLAG 160 HSP 2 Score: 48.1358 bits (113), Expect = 5.387e-24 Identity = 20/50 (40.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+ + GRMGG + T++N+ V ++ P +N++ ++G VPGA + + IK AV Sbjct: 155 GKNLAGRMGGDRVTIQNLEVVQVVPEKNVILIKGNVPGAKKSLITIKSAV 204
BLAST of DY257874 vs. ExPASy Swiss-Prot
Match: RL3_STRP7 (50S ribosomal protein L3 OS=Streptococcus pneumoniae (strain 70585) GN=rplC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.387e-24 Identity = 57/161 (35.40%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 G++ K G+T + + G IPV+V+ N+V QVKT E +G+ ++QVG K++ KP GH KR +REF E L +G + V F G VD+ R G P +HG S HR GS G AP +VFKGK G Sbjct: 4 GILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNVEG--LEVGAEITVETFAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VAPNRVFKGKNLAG 160 HSP 2 Score: 48.1358 bits (113), Expect = 5.387e-24 Identity = 20/50 (40.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+ + GRMGG + T++N+ V ++ P +N++ ++G VPGA + + IK AV Sbjct: 155 GKNLAGRMGGDRVTIQNLEVVQVVPEKNVILIKGNVPGAKKSLITIKSAV 204
BLAST of DY257874 vs. ExPASy Swiss-Prot
Match: RL3_STRP4 (50S ribosomal protein L3 OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=rplC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.387e-24 Identity = 57/161 (35.40%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 G++ K G+T + + G IPV+V+ N+V QVKT E +G+ ++QVG K++ KP GH KR +REF E L +G + V F G VD+ R G P +HG S HR GS G AP +VFKGK G Sbjct: 4 GILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNVEG--LEVGAEITVETFAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VAPNRVFKGKNLAG 160 HSP 2 Score: 48.1358 bits (113), Expect = 5.387e-24 Identity = 20/50 (40.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+ + GRMGG + T++N+ V ++ P +N++ ++G VPGA + + IK AV Sbjct: 155 GKNLAGRMGGDRVTIQNLEVVQVVPEKNVILIKGNVPGAKKSLITIKSAV 204
BLAST of DY257874 vs. ExPASy Swiss-Prot
Match: RL3_STRP2 (50S ribosomal protein L3 OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=rplC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.387e-24 Identity = 57/161 (35.40%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 226 GLIAVKCGITATWDKWGARIPVSVLFVDDNIVSQVKTFEKEGFFSLQVGCGQKKDKHMTKPEVGHFRAQGVPLKRKLREFPVTEDALLPIGTSLGVRHFIPGQYVDIXXXXXXXXXXXXXXRWGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKCLG 708 G++ K G+T + + G IPV+V+ N+V QVKT E +G+ ++QVG K++ KP GH KR +REF E L +G + V F G VD+ R G P +HG S HR GS G AP +VFKGK G Sbjct: 4 GILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNVEG--LEVGAEITVETFAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VAPNRVFKGKNLAG 160 HSP 2 Score: 48.1358 bits (113), Expect = 5.387e-24 Identity = 20/50 (40.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 690 GQKMPGRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 839 G+ + GRMGG + T++N+ V ++ P +N++ ++G VPGA + + IK AV Sbjct: 155 GKNLAGRMGGDRVTIQNLEVVQVVPEKNVILIKGNVPGAKKSLITIKSAV 204 The following BLAST results are available for this feature:
BLAST of DY257874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257874 ID=DY257874; Name=DY257874; organism=Citrus clementina; type=EST; length=1221bpback to top |