DY257875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257875 vs. ExPASy Swiss-Prot
Match: RS28_KLUMA (40S ribosomal protein S28 OS=Kluyveromyces marxianus GN=RPS28 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.588e-12 Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 3 Query: 75 MDSQ--IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 227 MDS+ + A V+KV+GRTGSRG VTQVRV+FL+D R I+RNVKGPVREGDI Sbjct: 1 MDSKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDTTRTIVRNVKGPVREGDI 53
BLAST of DY257875 vs. ExPASy Swiss-Prot
Match: RS28_HUMAN (40S ribosomal protein S28 OS=Homo sapiens GN=RPS28 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.588e-12 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 3 Query: 87 IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 227 IK A V KV+GRTGS+GQ TQVRV+F+DD +R I+RNVKGPVREGD+ Sbjct: 9 IKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDV 55
BLAST of DY257875 vs. ExPASy Swiss-Prot
Match: RS28_BOVIN (40S ribosomal protein S28 OS=Bos taurus GN=RPS28 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.588e-12 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 3 Query: 87 IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 227 IK A V KV+GRTGS+GQ TQVRV+F+DD +R I+RNVKGPVREGD+ Sbjct: 9 IKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDV 55
BLAST of DY257875 vs. ExPASy Swiss-Prot
Match: RS28_ASHGO (40S ribosomal protein S28 OS=Ashbya gossypii GN=RPS28A PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.380e-12 Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 3 Query: 75 MDSQ--IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 227 MDS+ + A V+KV+GRTGSRG VTQVRV+FLDD +R I+RNVKGPVRE DI Sbjct: 1 MDSKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLDDTSRTIVRNVKGPVRENDI 53
BLAST of DY257875 vs. ExPASy Swiss-Prot
Match: RS28_KLULA (40S ribosomal protein S28 OS=Kluyveromyces lactis GN=RPS28 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.414e-12 Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 3 Query: 96 AVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 227 A V+KV+GRTGSRG VTQVRV+FL+D R I+RNVKGPVREGDI Sbjct: 10 AKVIKVLGRTGSRGGVTQVRVEFLEDTTRTIVRNVKGPVREGDI 53
BLAST of DY257875 vs. ExPASy Swiss-Prot
Match: RS28_OSTOS (40S ribosomal protein S28 OS=Ostertagia ostertagi GN=rps-28 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.529e-12 Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 3 Query: 75 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQ-NRFIMRNVKGPVREGDI 227 MD +K A V K +GRTGS+GQ TQVRV+F+DD NR I RNVKGPVREGDI Sbjct: 1 MDKPVKPAXVTKNIGRTGSQGQCTQVRVEFMDDNGNRTINRNVKGPVREGDI 52
BLAST of DY257875 vs. ExPASy Swiss-Prot
Match: RS28_NEUCR (40S ribosomal protein S28 OS=Neurospora crassa GN=rps-28 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 9.833e-12 Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 75 MDSQ---IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 227 MDS +K V +V+GRTGSRG VTQVRV+F+DDQ R I+RNVKGPVRE DI Sbjct: 1 MDSSKAPVKLVKVTRVLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVREDDI 54
BLAST of DY257875 vs. ExPASy Swiss-Prot
Match: RS28B_YEAST (40S ribosomal protein S28-B OS=Saccharomyces cerevisiae GN=RPS28B PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 9.833e-12 Identity = 36/53 (67.92%), Postives = 44/53 (83.02%), Query Frame = 3 Query: 75 MDSQ--IKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 227 MDS+ + A V+KV+GRTGSRG VTQVRV+FL+D +R I+RNVKGPVRE DI Sbjct: 1 MDSKTPVTLAKVIKVLGRTGSRGGVTQVRVEFLEDTSRTIVRNVKGPVRENDI 53
BLAST of DY257875 vs. ExPASy Swiss-Prot
Match: RS28A_YEAST (40S ribosomal protein S28-A OS=Saccharomyces cerevisiae GN=RPS28A PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.677e-11 Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 3 Query: 96 AVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 227 A V+KV+GRTGSRG VTQVRV+FL+D +R I+RNVKGPVRE DI Sbjct: 10 AKVIKVLGRTGSRGGVTQVRVEFLEDTSRTIVRNVKGPVRENDI 53
BLAST of DY257875 vs. ExPASy Swiss-Prot
Match: RS28_CANGA (40S ribosomal protein S28 OS=Candida glabrata GN=RPS28A PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.191e-11 Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 3 Query: 96 AVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 227 A V+KV+GRTGSRG VTQVRV+FL+D +R I+RNVKGPVRE DI Sbjct: 10 ARVIKVLGRTGSRGGVTQVRVEFLEDTSRTIVRNVKGPVRENDI 53 The following BLAST results are available for this feature:
BLAST of DY257875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257875 ID=DY257875; Name=DY257875; organism=Citrus clementina; type=EST; length=484bpback to top |