DY257880

Overview
NameDY257880
Unique NameDY257880
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length649
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H3_MAGGR (Histone H3 OS=Magnaporthe grisea GN=HHT1 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.843e-62
Identity = 120/135 (88.89%), Postives = 129/135 (95.56%), Query Frame = 1 
Query:   76 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 480
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS A+ ALQE+ E+YLV LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H3_GIBZE (Histone H3 OS=Gibberella zeae GN=HHT1 PE=3 SV=3)

HSP 1 Score: 238.81 bits (608), Expect = 1.843e-62
Identity = 120/135 (88.89%), Postives = 129/135 (95.56%), Query Frame = 1 
Query:   76 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 480
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS A+ ALQE+ E+YLV LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H3_CHAGB (Histone H3 OS=Chaetomium globosum GN=HHT1 PE=2 SV=3)

HSP 1 Score: 238.81 bits (608), Expect = 1.843e-62
Identity = 120/135 (88.89%), Postives = 129/135 (95.56%), Query Frame = 1 
Query:   76 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 480
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS A+ ALQE+ E+YLV LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135
[Close]
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H3L2_ARATH (Histone H3-like 2 OS=Arabidopsis thaliana GN=MGH3 PE=2 SV=3)

HSP 1 Score: 238.81 bits (608), Expect = 1.843e-62
Identity = 124/137 (90.51%), Postives = 129/137 (94.16%), Query Frame = 1 
Query:   76 MARTKQTARKSTGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 483
            MARTKQTARKSTGGK PRK+LATKAARK+  P  GGVK+ HR+RPGTVALREIRKYQKST+LLIRKLPFQRLVREIAQDFK DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIM KDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKVDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMSKDIQLARRIRGERA 137
[Close]
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H31_TETTH (Histone H3 OS=Tetrahymena thermophila GN=HHT1 PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 1.843e-62
Identity = 120/135 (88.89%), Postives = 129/135 (95.56%), Query Frame = 1 
Query:   76 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 480
            MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR+RPGTVALREIRKYQKST+LLIRKLPFQRLVR+IA +FK +LRFQS AVLALQEAAEAYLVGLFEDTNLCAIHA+RVTIM KD+QLARRIRGER
Sbjct:    1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVRDIAHEFKAELRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135
[Close]
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H31_TETPY (Histone H3 OS=Tetrahymena pyriformis PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 1.843e-62
Identity = 120/135 (88.89%), Postives = 129/135 (95.56%), Query Frame = 1 
Query:   76 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 480
            MARTKQTARKSTG KAPRKQLA+KAARKSAP TGG+KKPHR+RPGTVALREIRKYQKST+LLIRKLPFQRLVR+IA +FK +LRFQS AVLALQEAAEAYLVGLFEDTNLCAIHA+RVTIM KD+QLARRIRGER
Sbjct:    1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVRDIAHEFKAELRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135
[Close]
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H3_COCIM (Histone H3 OS=Coccidioides immitis GN=HHT1 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.145e-62
Identity = 119/136 (87.50%), Postives = 129/136 (94.85%), Query Frame = 1 
Query:   76 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 483
            MARTKQTARKSTGGKAPRKQ+A KAARK+AP+TGGVKKPHRY+PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQS A+ ALQE+ EAYLV LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQIAAKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
[Close]
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H33_PICST (Histone H3.3 OS=Pichia stipitis GN=HHT3 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.145e-62
Identity = 120/136 (88.24%), Postives = 129/136 (94.85%), Query Frame = 1 
Query:   76 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 483
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP +GGVKKPHRY+PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFK+DLRFQS A+ ALQEA EAYLV LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPVSGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQEAVEAYLVSLFEDTNLCAIHAKRVTIQKKDIQLARRLRGERS 136
[Close]
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H33_DEBHA (Histone H3.3 OS=Debaryomyces hansenii GN=HHT3 PE=3 SV=3)

HSP 1 Score: 238.039 bits (606), Expect = 3.145e-62
Identity = 120/136 (88.24%), Postives = 129/136 (94.85%), Query Frame = 1 
Query:   76 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 483
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP +GGVKKPHRY+PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFK+DLRFQS A+ ALQEA EAYLV LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPVSGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQEAVEAYLVSLFEDTNLCAIHAKRVTIQKKDIQLARRLRGERS 136
[Close]
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H33L2_CAEEL (Histone H3.3-like type 2 OS=Caenorhabditis elegans GN=his-74 PE=2 SV=3)

HSP 1 Score: 238.039 bits (606), Expect = 3.145e-62
Identity = 122/136 (89.71%), Postives = 129/136 (94.85%), Query Frame = 1 
Query:   76 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 483
            MARTKQTARKSTGGKAPRK LATKAARKSA  TG VKK HR+RPGTVALREIR+YQKSTELL+RKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKALATKAARKSAIVTGSVKKVHRFRPGTVALREIRRYQKSTELLLRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERS 136
The following BLAST results are available for this feature:
BLAST of DY257880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
H3_MAGGR1.843e-6288.89Histone H3 OS=Magnaporthe grisea GN=HHT1 PE=3 SV=1[more]
H3_GIBZE1.843e-6288.89Histone H3 OS=Gibberella zeae GN=HHT1 PE=3 SV=3[more]
H3_CHAGB1.843e-6288.89Histone H3 OS=Chaetomium globosum GN=HHT1 PE=2 SV=... [more]
H3L2_ARATH1.843e-6290.51Histone H3-like 2 OS=Arabidopsis thaliana GN=MGH3 ... [more]
H31_TETTH1.843e-6288.89Histone H3 OS=Tetrahymena thermophila GN=HHT1 PE=1... [more]
H31_TETPY1.843e-6288.89Histone H3 OS=Tetrahymena pyriformis PE=1 SV=2[more]
H3_COCIM3.145e-6287.50Histone H3 OS=Coccidioides immitis GN=HHT1 PE=3 SV... [more]
H33_PICST3.145e-6288.24Histone H3.3 OS=Pichia stipitis GN=HHT3 PE=3 SV=1[more]
H33_DEBHA3.145e-6288.24Histone H3.3 OS=Debaryomyces hansenii GN=HHT3 PE=3... [more]
H33L2_CAEEL3.145e-6289.71Histone H3.3-like type 2 OS=Caenorhabditis elegans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1DH12ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257880 ID=DY257880; Name=DY257880; organism=Citrus clementina; type=EST; length=649bp
GGAATTTCTTTACGTTATTGAGGCGTTGCATTCAGATCTGTGCATTTTGC
AGTTTGTGTTGGTGATTAAAGAGTAATGGCCCGTACGAAGCAAACCGCGC
GCAAGTCAACTGGAGGAAAGGCTCCGAGGAAGCAGCTCGCCACAAAGGCT
GCAAGAAAATCTGCTCCAACAACTGGTGGAGTCAAGAAGCCCCATCGTTA
CCGTCCAGGAACTGTCGCCCTACGTGAAATCCGCAAATATCAAAAGAGCA
CTGAGCTTTTGATCCGCAAGCTGCCTTTCCAGCGGCTGGTTCGTGAAATT
GCTCAAGATTTCAAGACAGATTTGAGGTTCCAAAGCCACGCGGTTCTTGC
GCTGCAGGAAGCGGCAGAGGCTTATCTCGTGGGTCTGTTCGAGGACACCA
ACCTTTGTGCTATCCATGCCAAGCGAGTCACCATTATGCCCAAGGATATT
CAACTGGCAAGGCGAATCCGAGGCGAGCGTGCTTAATTTGTGATTCCTTA
GGTAGTCGTCAGTTTCCTATTTAGTTTGCTAGTTTTTCTTTATTTCGGTT
TTTACATGTAAAGAATGATATGATGGATTGAAGAATATTTGGCATTTGAT
ATTTGCTAGATAAATGTTTATTGTGGAGCTTATCTTGTTTCACTTTACC
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