DY257880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H3L_BOVIN (Histone H3-like OS=Bos taurus PE=2 SV=3) HSP 1 Score: 163.31 bits (412), Expect = 9.843e-40 Identity = 85/119 (71.43%), Postives = 97/119 (81.51%), Query Frame = 1 Query: 76 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFED---TNLCAIHAK 423 MARTK+TA KSTGGK PRKQL +AA KSAP+T G+ KPHRYRPGTVALREIR YQKST LIRKLPFQRLVREIAQDFKTDL+FQS A+ LQEA+EAYLV E +NL ++++ Sbjct: 1 MARTKRTAYKSTGGKVPRKQLVIEAAGKSAPSTSGMTKPHRYRPGTVALREIRPYQKSTHFLIRKLPFQRLVREIAQDFKTDLKFQSAAIRTLQEASEAYLVVFLESKQHSNLARMYSQ 119
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H3_ENTHI (Histone H3 OS=Entamoeba histolytica GN=H3 PE=3 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 4.136e-38 Identity = 91/136 (66.91%), Postives = 100/136 (73.53%), Query Frame = 1 Query: 76 MARTK-QTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 480 MARTK R S K +A KAA+K KK R PG VAL EI+ Q+STELL+RK PFQ LVREIAQ K+DLRFQS A+ ALQEAAEAYLVGLFEDTNLCAIHAKR+TIMPKD+QLARRIRGER Sbjct: 1 MARTKGHIERPSNKSAKAVKNVAFKAAKKMLSKDSTKKK--RAHPGAVALTEIKVLQRSTELLLRKAPFQALVREIAQVSKSDLRFQSAAISALQEAAEAYLVGLFEDTNLCAIHAKRITIMPKDMQLARRIRGER 134
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H33_HORVU (Histone H3.3 (Fragment) OS=Hordeum vulgare PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.203e-37 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1 Query: 244 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 483 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 80
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H3L3_LILLO (Histone H3-like 3 OS=Lilium longiflorum GN=leH3 PE=2 SV=3) HSP 1 Score: 155.221 bits (391), Expect = 2.681e-37 Identity = 90/156 (57.69%), Postives = 102/156 (65.38%), Query Frame = 1 Query: 76 MARTKQTARKSTGGKAPRKQLATKAARKSAPTT-----------------------GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 474 MAR K AR STGGKAPRKQLA KA RK+AP T GVK+PHRYRPG + LREIRKY+K+ I KLPF RLVR+I Q+ K LRFQS A+ A +E +EAYLV LFED AIHAKRVT++PKDIQLAR I G Sbjct: 1 MARMKLNARMSTGGKAPRKQLAYKAVRKAAPPTIGVKLPNSYRPGDQTVCKPAPPTDGVKEPHRYRPGKMGLREIRKYKKNARFFISKLPFHRLVRKITQNLKAHLRFQSTAMPAPEEVSEAYLVKLFED----AIHAKRVTLVPKDIQLARCIGG 152
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: CENPA_NEUCR (Histone H3-like centromeric protein cse-4 OS=Neurospora crassa GN=cse-4 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.774e-34 Identity = 79/142 (55.63%), Postives = 102/142 (71.83%), Query Frame = 1 Query: 76 MARTKQTARKSTGGKAP------RKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT---DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 474 + ++K ++K+ P R++ + + P G K+ RYRPGT+AL+EIR YQ++T+LL+ KLPF RLVREIA F+ ++R+QS A+LALQEAAEA+LV LFEDTNLCAIHAKRVTIM KDIQLARRIRG Sbjct: 8 VTKSKAVSKKAAAVPTPKATPPGRRKSRASSVQPGDPVPQGKKR--RYRPGTLALKEIRNYQRTTDLLVAKLPFARLVREIAMQFRPMDEEMRWQSQAILALQEAAEAFLVHLFEDTNLCAIHAKRVTIMQKDIQLARRIRG 147
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: H3_LEIIN (Histone H3 OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.732e-34 Identity = 79/136 (58.09%), Postives = 99/136 (72.79%), Query Frame = 1 Query: 76 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR-YRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 480 M+RTK+TAR ++ + +K ++K+ GVK+ HR +RPGT A+REIRK+QKST LLI+ PFQRLVR + + K LRFQS A++ALQEA EAY+V L DTNL IHAKRVTI PKDIQLA R+RGER Sbjct: 1 MSRTKETARA-------KRTITSKKSKKAPSGASGVKRSHRRWRPGTCAIREIRKFQKSTSLLIQCAPFQRLVRGVERQ-KEGLRFQSSAIMALQEATEAYIVSLMADTNLACIHAKRVTIQPKDIQLALRLRGER 128
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: CENPA_CANAL (Histone H3-like centromeric protein CSE4 OS=Candida albicans GN=CSE4 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.377e-33 Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 1 Query: 169 TTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 477 T VKK RYRPGT ALREIR+YQKST+LLIRKLPF RLVREI+ DF LR+QS+A+LALQEA+E++L+ L EDTNLCAIHAKRVTIM KDIQLARRIRG+ Sbjct: 104 TVPRVKK--RYRPGTKALREIRQYQKSTDLLIRKLPFARLVREISLDFVGPSYGLRWQSNAILALQEASESFLIHLLEDTNLCAIHAKRVTIMQKDIQLARRIRGQ 207
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: CENPA_DANRE (Histone H3-like centromeric protein A OS=Danio rerio GN=cenpa PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.165e-32 Identity = 72/132 (54.55%), Postives = 93/132 (70.45%), Query Frame = 1 Query: 82 RTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD-LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 474 R T R+ + + ++ R S P+ +K H++RPGT AL EIRKYQKST LL+RK PF RLVRE+ Q F + + +Q +A++ALQEAAEA++V LF D NLCAIHAKRVT+ P+DIQLARRIRG Sbjct: 10 RKPSTPRRRSPPASLPPPAGSRTRRHSGPSGSSPRKKHKFRPGTRALMEIRKYQKSTGLLLRKAPFSRLVREVCQMFSREHMMWQGYALMALQEAAEAFMVRLFSDANLCAIHAKRVTLFPRDIQLARRIRG 141
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: CENPA_PICFA (Histone H3-like centromeric protein CSE4 OS=Pichia farinosa GN=CSE4 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.596e-32 Identity = 72/96 (75.00%), Postives = 84/96 (87.50%), Query Frame = 1 Query: 196 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 474 RYRPGT ALREIR+YQ+S+ELLIRKLPF RLV+E+A+++ +R+QS+AVLALQEA EA+LV L EDTNLCAIHAKRVTIM KDIQLARRIRG Sbjct: 61 RYRPGTKALREIRRYQRSSELLIRKLPFARLVKEVAENYIGADYGIRWQSNAVLALQEACEAFLVHLLEDTNLCAIHAKRVTIMQKDIQLARRIRG 156
BLAST of DY257880 vs. ExPASy Swiss-Prot
Match: CENPA_ASHGO (Histone H3-like centromeric protein CSE4 OS=Ashbya gossypii GN=CSE4 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.429e-32 Identity = 73/139 (52.52%), Postives = 95/139 (68.35%), Query Frame = 1 Query: 70 RVMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT---DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 477 RV+ R + A + R++ + T KKP RYRP VAL+EIR+YQ+STELLI ++PF RLV+E+ F T +R+QS A+LALQEA+EAY+VGL E TNL A+HAKRVT+M KD+QLARRIRG+ Sbjct: 64 RVVERVAEPAAAESRADGAREEERPARPARPRETRRIAKKPQRYRPSDVALQEIRRYQRSTELLISRMPFARLVKEVTDQFTTVDQQMRWQSMAILALQEASEAYIVGLLEHTNLLALHAKRVTVMRKDMQLARRIRGQ 202 The following BLAST results are available for this feature:
BLAST of DY257880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257880 ID=DY257880; Name=DY257880; organism=Citrus clementina; type=EST; length=649bpback to top |