DY257883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257883 vs. ExPASy Swiss-Prot
Match: DCAF6_HUMAN (DDB1- and CUL4-associated factor 6 OS=Homo sapiens GN=DCAF6 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.113e-18 Identity = 63/196 (32.14%), Postives = 96/196 (48.98%), Query Frame = 1 Query: 1 GHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPYIIYSCGENGFVQHFDLR-SDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYD-----IRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYS-NTSELLISYNDELVYLFE 564 GH NIF + +P T+D++I++ S DG + + +D + + + H G Y++ P PY SCGE+G V+ FD R S T+ N ++ S + I P P Y AVG SD R+YD R Y+ + V F P HL K + +T L YS + E+L+SY+ + +YLF+ Sbjct: 92 GHRANIFSAKFLPCTNDKQIVSCSGDGVIFYTNVEQDAETNRQCQFTCHYGTTYEIMTVPNDPYTFLSCGEDGTVRWFDTRIKTSCTKEDCKDDILINCRRAATS-----VAICPPIPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNNK-SCRVTSLCYSEDGQEILVSYSSDYIYLFD 281 HSP 2 Score: 91.2781 bits (225), Expect = 1.370e-17 Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 637 VYSGHRNSQT-VKGVNFFGPNDEYVMRGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPM 879 VY GHRNS+T +K NF+G N +VM GSDCGH+FIW + + + L+ D HVVN L+PHP P+ A+ GI+ +K+W+P+ Sbjct: 712 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQPHPFDPILASSGIDYDIKIWSPL 791
BLAST of DY257883 vs. ExPASy Swiss-Prot
Match: YBU3_SCHPO (Uncharacterized WD repeat-containing protein C609.03 OS=Schizosaccharomyces pombe GN=SPBC609.03 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 6.148e-18 Identity = 61/176 (34.66%), Postives = 90/176 (51.14%), Query Frame = 1 Query: 535 YNDELVYLF--------EKNMGLGPSPLSLSPEDLQKREEPQV--------YSGHRNSQTVKGVNFFGPNDEYVMRGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPL------PDNAEKIMKANKQGKEDHSRIT-LTPDVIMHV 993 Y DE Y + +++ GP+ LSL + +K EP V Y GH N +++K VNF+G NDEYVM GSD G FIW K ++ ++ GD VN +E HP P A GI+ TVK++ T PP N+ KI+ N+ ++ SR + +T ++ H+ Sbjct: 614 YQDEESYSYASDDDDESDEDSDEGPTLLSLRMKK-RKAVEPNVPVNTHVKSYYGHCNVESIKNVNFYGQNDEYVMSGSDDGRFFIWDKLNASILAIIHGDSEAVNVIEGHPRCPTLAVSGIDSTVKIFNTENT--PPSGCSRNHTSNSYKIIATNEMNRQQGSRDSYITSRMLSHL 786 HSP 2 Score: 74.7146 bits (182), Expect = 1.327e-12 Identity = 67/236 (28.39%), Postives = 109/236 (46.19%), Query Frame = 1 Query: 1 GHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQI--FEDGRMDTKRLGKHQGRVYKLAVEP---------GSPYIIYSCGENGFVQHFDLRSDSATRL-FYCSSFSENSKQPMNSIRLN--AIVIDPRNPNYFAVGGSDEYARVYDIR------KCHW---YSPISSDTPVDTFCPRHLIGKNNI---HITGLAYS--NTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKR 624 GH+ NIF + +P++++R+I+++S D ++L + ++G MD + Q R + A++ G +++ C E+G + +D+R C S N N R+N I + P NP YFA+GG+ YA +YD R + W SP V F P I +IT +S N +ELL+S+N + VYLF + +P ED K+ Sbjct: 87 GHVQNIFSAKFVPYSNNRQILSASGDKLIKLFDLDSSKEGGMDHGM--ETQTRCWSCALDSVKNIVPCDNGHTFLV--CSEDGTARQYDIREPHVCNQDLDCPSILVN----YNPYRINLYTITMSPSNPYYFAIGGTHPYAFLYDRRMVKKSFRDDWTMNTSPEKDCRCVRKFSPDGSCNSQGILDRYITCCQFSAANPNELLVSWNSDYVYLFHVHEDKSYTPTFNKIEDSNKK 314
BLAST of DY257883 vs. ExPASy Swiss-Prot
Match: WDTC1_MOUSE (WD and tetratricopeptide repeats protein 1 OS=Mus musculus GN=Wdtc1 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.583e-16 Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 595 SLSPEDLQKREEPQVYS----GHRNSQT-VKGVNFFGPNDEYVMRGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 882 S+S +++ RE Y GH N+ T +K NFFG N +Y++ GSD G FIW+K+ LVR++ GD +VN L+PHP AT GI+ V+LW P P Sbjct: 511 SISEDEMVLRERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRP 611 HSP 2 Score: 78.1814 bits (191), Expect = 1.200e-13 Identity = 58/215 (26.98%), Postives = 95/215 (44.19%), Query Frame = 1 Query: 1 GHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGENGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTP---VDTFCPR---------------HLIGK-----NNIHITGLAY----SNTSELLISYNDELVYLFE 564 GH NIF + +P DR +IT +AD +V + + + G H RV ++A P P +S E+G ++ +DLR +S + + ++ + + ++P++ N AVG S + R+YDIR H + +P V TFC R HL K + + + Y N +ELL++ E VYLF+ Sbjct: 88 GHTANIFSVKFLPHAGDRILITGAADSKVHVHDLTV--KETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSK----HSEVLIDLTEYCGPMVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMRQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNSRLRVLVATYVTFSPNGTELLVNMGGEQVYLFD 296
BLAST of DY257883 vs. ExPASy Swiss-Prot
Match: WDTC1_HUMAN (WD and tetratricopeptide repeats protein 1 OS=Homo sapiens GN=WDTC1 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 2.583e-16 Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 595 SLSPEDLQKREEPQVYS----GHRNSQT-VKGVNFFGPNDEYVMRGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 882 S+S +++ RE Y GH N+ T +K NFFG N +Y++ GSD G FIW+K+ LVR++ GD +VN L+PHP AT GI+ V+LW P P Sbjct: 511 SISEDEMVLRERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRP 611 HSP 2 Score: 80.8777 bits (198), Expect = 1.851e-14 Identity = 59/215 (27.44%), Postives = 95/215 (44.19%), Query Frame = 1 Query: 1 GHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGENGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTP---VDTFCPR---------------HLIGK-----NNIHITGLAY----SNTSELLISYNDELVYLFE 564 GH NIF + +P DR +IT +AD +V + + + G H RV ++A P P +S E+G ++ +DLR +S + + ++ + + ++P++ N AVG S + R+YDIR H + +P V TFC R HL K N + + Y N +ELL++ E VYLF+ Sbjct: 88 GHTANIFSVKFLPHAGDRILITGAADSKVHVHDLTV--KETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSK----HSEVLIDLTEYCGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFD 296
BLAST of DY257883 vs. ExPASy Swiss-Prot
Match: DCAF5_MOUSE (DDB1- and CUL4-associated factor 5 OS=Mus musculus GN=Dcaf5 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.263e-12 Identity = 71/302 (23.51%), Postives = 125/302 (41.39%), Query Frame = 1 Query: 4 HLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGENGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMRGSDCGHLFIWKKKG-------GKLVR----LMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAP 876 H NIF + + K+ + D QV L + +D + H+ VY L+V P + I S ++G V +D+R F +++ ++++ +P P A S E ++DIRK ++++ G S S + + +N L L P + + + Q G+ NS T+K F G D+Y++ GSD +L++WK G++V ++ G R +VNQ+ +PH M + G+EK +K+W+P Sbjct: 100 HHSNIFCLAFN--SGNTKVFSGGNDEQVILHDVESSETLD---VFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPS---------AFHSVMFNPVEPRLLATANSKEGVGLWDIRK----------------------PQSSLLRYGGNLSLQSAMSVRFNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQ---GYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWKIPADPEAGGIGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWSP 362 The following BLAST results are available for this feature:
BLAST of DY257883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257883 ID=DY257883; Name=DY257883; organism=Citrus clementina; type=EST; length=1290bpback to top |