DY257895

Overview
NameDY257895
Unique NameDY257895
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length540
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY257895_ssr430 microsatellite DY257895_ssr430:430..445. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10083 contig Ccv1_Contig10083:6..545. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY257895 vs. ExPASy Swiss-Prot
Match: CP51A_PIG (Lanosterol 14-alpha demethylase OS=Sus scrofa GN=CYP51A1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.697e-12
Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 1 
Query:    1 PAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGA-FSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISP-FPEIDWNAXXXXXXXXXXXRYKRR 297
            P    RL   +     ++PDR+    +++ A+G  F+Y+ FG GRH C+GE FAY+QIK IWS +LR +EF+LI   FP +++             RYKRR
Sbjct:  405 PTVNQRLKDSWVERLDFNPDRYL---QDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTT-MIHTPENPVIRYKRR 501
[Close]
BLAST of DY257895 vs. ExPASy Swiss-Prot
Match: CP51A_MACFA (Lanosterol 14-alpha demethylase OS=Macaca fascicularis GN=CYP51A1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 7.697e-12
Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 1 
Query:    1 PAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGA-FSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISP-FPEIDWNAXXXXXXXXXXXRYKRR 297
            P    RL   +     ++PDR+    +++ A+G  F+Y+ FG GRH C+GE FAY+QIK IWS +LR +EF+LI   FP +++             RYKRR
Sbjct:  405 PTVNQRLKDSWVERLDFNPDRYL---QDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTT-MIHTPENPVIRYKRR 501
[Close]
BLAST of DY257895 vs. ExPASy Swiss-Prot
Match: CP51A_HUMAN (Lanosterol 14-alpha demethylase OS=Homo sapiens GN=CYP51A1 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 7.697e-12
Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 1 
Query:    1 PAFANRLPHIYKNPDSYDPDRFAPGREEDKAAGA-FSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISP-FPEIDWNAXXXXXXXXXXXRYKRR 297
            P    RL   +     ++PDR+    +++ A+G  F+Y+ FG GRH C+GE FAY+QIK IWS +LR +EF+LI   FP +++             RYKRR
Sbjct:  405 PTVNQRLKDSWVERLDFNPDRYL---QDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTT-MIHTPENPVIRYKRR 501
The following BLAST results are available for this feature:
BLAST of DY257895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CP51A_PIG7.697e-1239.60Lanosterol 14-alpha demethylase OS=Sus scrofa GN=C... [more]
CP51A_MACFA7.697e-1239.60Lanosterol 14-alpha demethylase OS=Macaca fascicul... [more]
CP51A_HUMAN7.697e-1239.60Lanosterol 14-alpha demethylase OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2AC02ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257895 ID=DY257895; Name=DY257895; organism=Citrus clementina; type=EST; length=540bp
CCAGCATTTGCAAACCGGCTTCCTCATATTTACAAGAATCCAGACAGTTA
CGATCCTGATAGGTTTGCTCCTGGAAGAGAAGAAGATAAGGCTGCTGGGG
CATTCTCATATATTTCGTTTGGTGGGGGTAGGCATGGATGTCTTGGTGAG
CCTTTTGCATATCTGCAGATAAAGGCAATATGGAGCCATTTGTTAAGAAA
TTTTGAATTTGAGCTGATATCTCCTTTCCCTGAGATTGATTGGAATGCAA
TGGTTGTTGGTGTCAAAGGAAAGGTGATGGTGCGTTACAAGCGCAGGGAA
CTTTCTGTTGACTAGATGGAACTACTTAGAGCAAGTATGTTGTCTGGGAT
GTTATAGACTAAGTTTTGTTTGAACTGCTGCTGCCATAGTCTTATTATGT
GTTATCGGAGAGGTTCTTGGCTTTTTTCTTCTCTCTCTCTCTCTCTTTTT
TTTTTTAAATTTATTTAACGGCGTTGTAACCTTTGCTTTCCTGATTCCCG
TACTTGTGACAAATTATGTAGATTAGCTTTTGCGTCAAGC
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