DY257913

Overview
NameDY257913
Unique NameDY257913
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1103
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY257913_ssr49 microsatellite DY257913_ssr49:49..70. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_PELLD (Adenylate kinase OS=Pelodictyon luteolum (strain DSM 273) GN=adk PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.796e-53
Identity = 102/199 (51.26%), Postives = 138/199 (69.35%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKP 816
            R+IL+G PG+GKGTQS  I     +  ++TGDMLRAAV A TPLG+KAKE MD G LVSDD+++ II E + +  C++G + DGFPRT  QA+ LD    +QG  +D V+   +DD  + +R++GR +HP+SGRTYH +F PP+  G+DD TGEPL+QR DDT   +K RLE +H QT P+I+YYS++   A   A  P
Sbjct:    2 RIILLGAPGAGKGTQSNYISKSLAIPQISTGDMLRAAVKAGTPLGLKAKEVMDGGNLVSDDIIMDIIKERLLEHDCKEGCLFDGFPRTIAQAESLD----RQGIDIDHVIEIHVDDREIIDRMSGRRVHPASGRTYHIRFNPPQTAGMDDETGEPLVQRADDTEETVKKRLEIYHDQTAPLIEYYSRRAAGAGTGAFAP 196          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_PSEU2 (Adenylate kinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=adk PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 4.769e-53
Identity = 104/218 (47.71%), Postives = 148/218 (67.89%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSK------KGIVAQLHAEKPPQEVTSEVQKALS 855
            R+IL+G PG+GKGTQ+  I +++ +  ++TGDMLRAAV A+T LG+KAK  MD G LVSDDL++G+I + + +P C  G + DGFPRT  QA    E L   G ++D VL  A+DD  + +R++GR +H  SGR YHT F PPKV G+DDVTGEPL+QRKDD    ++ RL  +H QT+P++++YSK      K   + +      +++T++V KALS
Sbjct:    2 RVILLGAPGAGKGTQAKFITEKFGIPQVSTGDMLRAAVKAETELGLKAKSVMDSGGLVSDDLIIGLIKDRLAEPDCANGVLFDGFPRTIPQA----EALLNAGLEIDHVLEIAVDDEEIVKRMSGRRVHEGSGRIYHTIFNPPKVEGIDDVTGEPLLQRKDDVEETVRHRLSVYHAQTKPLVEFYSKLEAKNGKPKCSHIPGVGSVEDITAKVLKALS 215          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_CLOK5 (Adenylate kinase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=adk PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 4.769e-53
Identity = 95/215 (44.19%), Postives = 143/215 (66.51%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKALSA*C 864
            ++IL+GPPG+GKGTQ+  I +EY + H++TGD+ R  ++ KTPLGI+AKE +DKG+LV D++ + I+ + + +  C+ GF+LDGFPRT  QA+ LD  L     K+D VL   +   ++ +R+TGR I PS G +YH KF PPK+    D+    +IQRKDDT + +K RL+ + KQTEP+I+YY K+G+++ +       +V    + AL A C
Sbjct:    2 KIILLGPPGAGKGTQAKFISEEYSIPHISTGDIFRKNISDKTPLGIEAKEYLDKGQLVPDEVTINIVKDRLSEDDCESGFLLDGFPRTVYQAEALDSFLNANDNKIDMVLLIDVPRELIFDRMTGRRICPSCGASYHVKFNPPKLKDKCDICNNDIIQRKDDTESTVKDRLDVYEKQTEPLINYYKKQGVISTIEGSGEINQVFQRAKSALGAVC 216          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_CLOK1 (Adenylate kinase OS=Clostridium kluyveri (strain NBRC 12016) GN=adk PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 4.769e-53
Identity = 95/215 (44.19%), Postives = 143/215 (66.51%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKALSA*C 864
            ++IL+GPPG+GKGTQ+  I +EY + H++TGD+ R  ++ KTPLGI+AKE +DKG+LV D++ + I+ + + +  C+ GF+LDGFPRT  QA+ LD  L     K+D VL   +   ++ +R+TGR I PS G +YH KF PPK+    D+    +IQRKDDT + +K RL+ + KQTEP+I+YY K+G+++ +       +V    + AL A C
Sbjct:    2 KIILLGPPGAGKGTQAKFISEEYSIPHISTGDIFRKNISDKTPLGIEAKEYLDKGQLVPDEVTINIVKDRLSEDDCESGFLLDGFPRTVYQAEALDSFLNANDNKIDMVLLIDVPRELIFDRMTGRRICPSCGASYHVKFNPPKLKDKCDICNNDIIQRKDDTESTVKDRLDVYEKQTEPLINYYKKQGVISTIEGSGEINQVFQRAKSALGAVC 216          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_EXISA (Adenylate kinase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=adk PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.062e-52
Identity = 98/210 (46.67%), Postives = 146/210 (69.52%), Query Frame = 1
Query:  223 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 852
            L+L+G PG+GKGTQ+  I +EY + H++TGDM RAA+   TPLG +AK  MDKGELV D++ +GI+ E + +   +KGF+LDGFPRT  QA+ L+ +L+  GK++D V+N  +D  +L  R+TGRWI P+ G TYH  F PPKV G+ DV G  L+QR+DD    ++ RL+   +Q++P+ID+Y++KG +  L  ++P   V ++V+  L
Sbjct:    3 LVLMGLPGAGKGTQAAKIVEEYQIPHISTGDMFRAAIKGGTPLGKEAKSFMDKGELVPDEVTIGIVRERLSQDDTEKGFLLDGFPRTVAQAEALESLLKDLGKQIDHVVNIDVDAEILVPRLTGRWICPTCGATYHVIFNPPKVEGICDVDGSALMQREDDKEETVRRRLDVNIEQSKPLIDFYAEKGYLRTLDGDRPIDVVYADVKALL 212          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_CARHZ (Adenylate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=adk PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.388e-52
Identity = 99/211 (46.92%), Postives = 142/211 (67.30%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 852
            +L+++GPPG+GKGTQ+  I  E+ + H++TGDM RAA+  +TPLG+KAKE MDKGELV D++V+ +++E +  P C KGF+LDGFPRT  QA+ LD+ L + G  +D V+N  +    L ER+TGR +    G TYH KF PPKV GV D  G  L QR DD+   + +RL+ +  QT P+ DYY+K G++  +   K  +EV + ++ AL
Sbjct:    2 KLLIMGPPGAGKGTQAEKIVKEFGITHISTGDMFRAALKNQTPLGLKAKEYMDKGELVPDEIVIAMVEERISAPDCAKGFLLDGFPRTIPQAEALDKKLAEMGITLDGVINIEVPREELIERLTGRRVCRQCGATYHVKFNPPKVEGVCDACGGELYQRSDDSLETVSNRLDVYEAQTAPLKDYYAKTGLLKNIDGTKSIEEVFASIKNAL 212          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_PSESM (Adenylate kinase OS=Pseudomonas syringae pv. tomato GN=adk PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 2.367e-52
Identity = 105/218 (48.17%), Postives = 147/218 (67.43%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSK------KGIVAQLHAEKPPQEVTSEVQKALS 855
            R+IL+G PG+GKGTQ+  I +++ +  ++TGDMLRAAV A T LG+KAK  MD G LVSDDL++G+I + + +P C  G + DGFPRT  QA    E L K G ++D VL  A+DD  + +R++GR +H  SGR YHT F PPKV GVDDVTGE L+QRKDD    ++ RL+ +H QT+P++++YSK      K   + +      +E+T++V  ALS
Sbjct:    2 RVILLGAPGAGKGTQAKFITEKFGIPQISTGDMLRAAVKAGTELGLKAKSVMDAGNLVSDDLIIGLIKDRLAEPDCANGVLFDGFPRTIPQA----EALLKAGLEIDHVLEIAVDDEEIVKRMSGRRVHEGSGRIYHTIFNPPKVEGVDDVTGESLVQRKDDVEETVRLRLKVYHDQTKPLVEFYSKLEAQNGKPKCSHIPGVGSVEEITAKVLVALS 215          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_JANMA (Adenylate kinase OS=Janthinobacterium sp. (strain Marseille) GN=adk PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 2.367e-52
Identity = 100/198 (50.51%), Postives = 139/198 (70.20%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEK 813
            RLIL+G PG+GKGTQ+  IKD++ +  ++TGDMLRAAV A TPLGI AK+ MD+G LVSDD+++G++ + +K+  C KG++ DGFPRT  QA    + +++ G  +D VL   + D  + ER++GR +HP+SGRTYH KF PPKV G DD+TGE LIQR DD    +K RL  +H+QTE ++ YY++     Q  A K
Sbjct:    2 RLILLGAPGAGKGTQAGFIKDKFNIPQISTGDMLRAAVKAGTPLGIAAKKIMDEGGLVSDDIIIGLVKDRLKEADCAKGYLFDGFPRTIPQA----DAMKEAGVAIDYVLEIDVPDEAIVERMSGRRVHPASGRTYHVKFNPPKVAGKDDLTGEELIQRDDDKEETVKKRLSVYHEQTEVLVGYYNQWAASGQPGAPK 195          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_BACHD (Adenylate kinase OS=Bacillus halodurans GN=adk PE=3 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 2.367e-52
Identity = 98/210 (46.67%), Postives = 144/210 (68.57%), Query Frame = 1
Query:  223 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 852
            LIL+G PG+GKGTQ+  I ++Y + H++TGDM RAA+  +T LG+KAK  MD GELV D++ +GI+ + + +  CQ GF+LDGFPRT  QA+ L+++L    KK+D V+N  + + +L +R+TGR + P+SGRTYH  F PPKV G+ DV G  LIQR DD    +K RLE   KQ +P+ID+YS+KG +  ++ ++    V  ++ + L
Sbjct:    3 LILMGLPGAGKGTQAEKIIEKYGIPHISTGDMFRAAMKNETELGLKAKSYMDAGELVPDEVTIGIVRDRLSQDDCQNGFLLDGFPRTVAQAEALEDILASLDKKLDYVINIDVPEQLLMDRLTGRRVSPTSGRTYHVIFNPPKVEGICDVDGSELIQRDDDKPETVKKRLEVNQKQAQPLIDFYSEKGYLQNINGDQDISRVFEDINELL 212          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_METCA (Adenylate kinase OS=Methylococcus capsulatus GN=adk PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 3.091e-52
Identity = 97/188 (51.60%), Postives = 134/188 (71.28%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKK 783
            R++L+G PGSGKGTQ+  + + + +  ++TGDMLRAAV   TPLG++AK+ MD G+LVSD +++G+I E +  P C  GF+LDGFPRT VQA  L E+    G  +D V+  A+DD  +  R++GR +HP+SGRTYH  F PPKV G DD TGEPL+QR+DD    ++ RLE +H QT+P++DYY  K
Sbjct:    2 RIMLLGSPGSGKGTQAKYLTERFGIPQISTGDMLRAAVREGTPLGMEAKKIMDAGQLVSDSIILGLIKERIAAPDCANGFLLDGFPRTIVQADALAEL----GVTLDHVVEIAVDDEEIVRRLSGRRVHPASGRTYHVVFNPPKVEGRDDETGEPLVQREDDKEETIRRRLEIYHVQTKPLVDYYRSK 185          
The following BLAST results are available for this feature:
BLAST of DY257913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_PELLD2.796e-5351.26Adenylate kinase OS=Pelodictyon luteolum (strain D... [more]
KAD_PSEU24.769e-5347.71Adenylate kinase OS=Pseudomonas syringae pv. syrin... [more]
KAD_CLOK54.769e-5344.19Adenylate kinase OS=Clostridium kluyveri (strain A... [more]
KAD_CLOK14.769e-5344.19Adenylate kinase OS=Clostridium kluyveri (strain N... [more]
KAD_EXISA1.062e-5246.67Adenylate kinase OS=Exiguobacterium sp. (strain AT... [more]
KAD_CARHZ1.388e-5246.92Adenylate kinase OS=Carboxydothermus hydrogenoform... [more]
KAD_PSESM2.367e-5248.17Adenylate kinase OS=Pseudomonas syringae pv. tomat... [more]
KAD_JANMA2.367e-5250.51Adenylate kinase OS=Janthinobacterium sp. (strain ... [more]
KAD_BACHD2.367e-5246.67Adenylate kinase OS=Bacillus halodurans GN=adk PE=... [more]
KAD_METCA3.091e-5251.60Adenylate kinase OS=Methylococcus capsulatus GN=ad... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2AF06ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257913 ID=DY257913; Name=DY257913; organism=Citrus clementina; type=EST; length=1103bp
GGCACCTACCCTTTTTCATTCAAACGCAAAAATCAAATCAAAATCAGACT
CTCTCTCTCTCTCTCTCTCTAATATCCGTCCAAAGAGGGAGGAAAACCCT
AAACGGCACCGTTTGCAAAAATGGCGAGCAGTTCAGCGGCGAACCTGGAA
GATGTGCCGTCGGTGGATCTCATGACTGAGCTCCTCCGTCGCATGAAGTG
CGCCTCCAAGCCAGACAAGCGCCTCATTCTCGTTGGCCCACCCGGATCAG
GAAAGGGTACTCAATCGCCCATCATTAAAGATGAATATTGCTTGTGTCAC
TTGGCTACTGGTGATATGTTGAGAGCCGCTGTTGCTGCTAAAACTCCTCT
TGGGATCAAGGCTAAGGAGGCTATGGACAAGGGAGAACTTGTTTCTGATG
ACTTGGTTGTTGGTATCATAGATGAAGCAATGAAGAAACCTTCTTGTCAG
AAAGGTTTCATTCTTGACGGGTTTCCCAGAACTGAGGTCCAAGCTCAGAA
GCTGGACGAGATGCTTGAGAAGCAGGGAAAAAAAGTTGATAAGGTTCTCA
ACTTTGCTATTGATGATGCGGTTTTGGAAGAGAGGATTACTGGTCGCTGG
ATCCACCCTTCAAGTGGCAGGACCTACCACACAAAATTTGCTCCTCCCAA
GGTTCCTGGTGTTGACGATGTAACTGGAGAACCTTTGATTCAACGTAAAG
ATGACACTGCAGCTGTTCTCAAGTCAAGGCTGGAGGCTTTCCACAAGCAA
ACTGAACCGGTAATTGATTATTACTCCAAAAAGGGCATTGTTGCACAACT
ACATGCTGAGAAGCCTCCTCAAGAAGTTACATCTGAGGTGCAGAAAGCAC
TTTCCGCATGATGTGGGCTACAACTGANGTTCATTATATGGTTCATTTAA
ATTTATCAGCAGATGAAACATCTGAAGAACTTTCTTATTCTTTTTTTTTG
GGCTCACGTGTACTTGAATATACTGTTTGAACATGCTGAATCCTTTGATG
TCCGGTTGCTATTTTTGACTTCGGATAATTGCGGCTGGCCCTTTCTTGGA
ATTTGATGAAAAACTGGATTTCCCTTTCAAATAAGAAACATTCCCAAGGT
TTT
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