DY257913

Overview
NameDY257913
Unique NameDY257913
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1103
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY257913_ssr49 microsatellite DY257913_ssr49:49..70. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_CLOBL (Adenylate kinase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=adk PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 2.004e-51
Identity = 94/211 (44.55%), Postives = 141/211 (66.82%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 852
            R+IL+GPPG+GKGTQ+ +I +++ + H++TGD+ RA +  KTPLGI+AK  +D G+LV D++ +GI+ + + K  C  GF+LDGFPRT  QA+ LDE L+   K++D  L   + +  + ER+TGR +  S G +YH +F PPK+ G  D+    LIQRKDDT A +K RLE + KQT P+I+YY   GI+++++  +   EV   +   L
Sbjct:    2 RIILLGPPGAGKGTQAKLISEKFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFILERMTGRRVCTSCGASYHIRFNPPKIEGKCDICDNELIQRKDDTEATVKERLEVYSKQTYPLINYYKDNGIISEVNGTESINEVFGNISNIL 212          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_CLOB6 (Adenylate kinase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=adk PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.617e-51
Identity = 94/211 (44.55%), Postives = 141/211 (66.82%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 852
            R+IL+GPPG+GKGTQ+ +I +++ + H++TGD+ RA +  KTPLGI+AK  +D G+LV D++ +GI+ + + K  C  GF+LDGFPRT  QA+ LDE L+   K++D  L   + +  + ER+TGR +  S G +YH +F PPK+ G  D+    LIQRKDDT A +K RLE + KQT P+I+YY   GI+++++  +   EV   +   L
Sbjct:    2 RVILLGPPGAGKGTQAKLISEKFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFILERMTGRRVCTSCGASYHIRFNPPKIEGKCDICDNELIQRKDDTEATVKERLEVYSKQTYPLINYYKDNGIISEVNGTESIDEVFGNISNIL 212          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_AZOSE (Adenylate kinase OS=Azoarcus sp. (strain EbN1) GN=adk PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.617e-51
Identity = 94/187 (50.27%), Postives = 137/187 (73.26%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSK 780
            RLIL+GPPG+GKGTQ+  IK+++ +  ++TGDMLRAAV A TPLG++AK+ MD G LVSDD+++G++ + +K+  C+ G++ DGFPRT  QA    + +++ G  +D VL   + D+ + ER++GR  H +SGRTYH K+ PPKV G DD+TGE L+QR DD    +  RLE +H QT+P+++YYSK
Sbjct:    2 RLILLGPPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKKVMDAGGLVSDDIIIGLVKDRLKEDDCKSGYMFDGFPRTIPQA----DAMKEAGVPIDFVLEIDVPDSEIIERMSGRRAHLASGRTYHVKYNPPKVAGKDDLTGEDLVQRDDDREETVAKRLEVYHSQTKPLVEYYSK 184          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_PROVI (Adenylate kinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=adk PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 3.418e-51
Identity = 102/221 (46.15%), Postives = 144/221 (65.16%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEK--------PPQEVTSEVQKALSA 858
            R+IL+G PG+GKGTQS  I     +  ++TGDMLRAAV  +TPLG KAKE MD G LVSDD+++ II E +K+  C+ G + DGFPRT  QA+ LD    ++G  ++ V+   ++D+ + +R++GR +HP+SGRTYH  F PP+  GVDD TGEPLIQR DDT   +K RL  +H+QT P+I+YY+ +     L + +          +E+   + KAL A
Sbjct:    2 RIILLGAPGAGKGTQSHFISKALGIPQISTGDMLRAAVKEETPLGRKAKEVMDSGNLVSDDIILDIIKERLKEDDCRSGCLFDGFPRTIAQAEALD----REGITINHVIEIRVEDSSIIQRMSGRRVHPASGRTYHLTFNPPQQQGVDDETGEPLIQRVDDTEETVKKRLAIYHEQTSPLIEYYTGRAAEGSLDSPRFTTVEGTGKVEEIRDRILKALGA 218          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_DIAST (Adenylate kinase OS=Diaphorobacter sp. (strain TPSY) GN=adk PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 4.464e-51
Identity = 104/221 (47.06%), Postives = 143/221 (64.71%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEK--------PPQEVTSEVQKALSA 858
            RLIL+G PG+GKGTQ+  I  ++ +  ++TGDMLRAAV A TPLG++AK  MD G+LVSDDL++ ++ E + +P C +GF+ DGFPRT  QA    + ++  G K+D VL   +    + ER++GR  HP+SGRTYH KF PPKV G DDVTGEPL+QR+DD    +K RL+ +  QT P++DYYS        +A K          +E+T     ALS+
Sbjct:    2 RLILLGAPGAGKGTQAAFICQKFGIPQISTGDMLRAAVKAGTPLGLQAKAVMDAGQLVSDDLIINLVKERIAEPDCAQGFLFDGFPRTIPQA----DAMKAAGVKLDYVLEIDVPFDAIIERMSGRRSHPASGRTYHVKFNPPKVEGKDDVTGEPLVQREDDKEETVKKRLQVYSDQTRPLVDYYSSWAKTDPANAPKYRAIQGTGSVEEITQRALTALSS 218          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_BACSK (Adenylate kinase OS=Bacillus clausii (strain KSM-K16) GN=adk PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 4.464e-51
Identity = 97/211 (45.97%), Postives = 143/211 (67.77%), Query Frame = 1
Query:  223 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKALS 855
            LIL+G PG+GKGTQ+  I ++Y + H++TGDM RAA+  +T LG+KAK  +D G+LV D++ +GI+ E + +  C+ GF+LDGFPRT  QA+ L+ +L   GK++D VLN A+   +L ER+TGR + P++G+TYH  + PPKV G  D+ G  LIQR DD    +K RLE   KQT+P+ID+Y  KG + Q+   +    V ++++  LS
Sbjct:    3 LILMGLPGAGKGTQAEKIVNDYGIPHISTGDMFRAAMKNETELGLKAKSFIDAGDLVPDEVTIGIVKERLSEDDCENGFLLDGFPRTIAQAEALEGILSSLGKQLDHVLNIAVPKELLMERLTGRRVSPTTGKTYHIVYNPPKVEGKCDIDGSDLIQRDDDKPETVKRRLEVNEKQTKPLIDFYEAKGYLRQVDGNQDMNTVYADIKAILS 213          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_ACISJ (Adenylate kinase OS=Acidovorax sp. (strain JS42) GN=adk PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 4.464e-51
Identity = 104/221 (47.06%), Postives = 143/221 (64.71%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEK--------PPQEVTSEVQKALSA 858
            RLIL+G PG+GKGTQ+  I  ++ +  ++TGDMLRAAV A TPLG++AK  MD G+LVSDDL++ ++ E + +P C +GF+ DGFPRT  QA    + ++  G K+D VL   +    + ER++GR  HP+SGRTYH KF PPKV G DDVTGEPL+QR+DD    +K RL+ +  QT P++DYYS        +A K          +E+T     ALS+
Sbjct:    2 RLILLGAPGAGKGTQAAFICQKFGIPQISTGDMLRAAVKAGTPLGLQAKAVMDAGQLVSDDLIINLVKERIAEPDCAQGFLFDGFPRTIPQA----DAMKAAGVKLDYVLEIDVPFDAIIERMSGRRSHPASGRTYHVKFNPPKVEGKDDVTGEPLVQREDDKEETVKKRLQVYSDQTRPLVDYYSSWAKTDPANAPKYRAIQGTGSVEEITQRALTALSS 218          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_VIBPA (Adenylate kinase OS=Vibrio parahaemolyticus GN=adk PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 5.830e-51
Identity = 103/217 (47.47%), Postives = 145/217 (66.82%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVA-----QLHAEKPPQEVTSEVQKALS 855
            R+IL+G PG+GKGTQ+  I D+Y +  ++TGDMLRAA+ A T LG +AK  +D G+LVSD++++G+I E + +  C+KGF+LDGFPRT  QA  L EM    G +VD V+ F + D V+ ER+ GR  H  SGRTYH  + PPKV G DDVTGE L+ R DD    +++RL  +H+QT P+IDYY K+         +    K   EV+++++KAL+
Sbjct:    2 RIILLGAPGAGKGTQANFIMDKYGIPQISTGDMLRAAIKAGTELGKQAKAVIDAGQLVSDEIILGLIKERIAQDDCEKGFLLDGFPRTIPQADGLKEM----GVEVDYVIEFDVADDVIVERMAGRRAHLPSGRTYHVVYNPPKVEGKDDVTGEDLVVRDDDKEETVRARLGVYHEQTAPLIDYYGKEAAAGKTKYLKFDGTKQVAEVSADIEKALA 214          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_BORBR (Adenylate kinase OS=Bordetella bronchiseptica GN=adk PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 5.830e-51
Identity = 93/186 (50.00%), Postives = 132/186 (70.97%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYS 777
            RLIL+GPPG+GKGTQ+  +   Y +  ++TGDMLRAAV A TPLG++AK+ MD G LVSDDL++G++ + + +P C  G++ DGFPRT  QA    + L+  G  +D V+   + ++ + ER++GR +HP+SGR+YH +F PPK  GVDDVTGEPL+QR DD    ++ RL  +  QT P++DYYS
Sbjct:    2 RLILLGPPGAGKGTQAAFLTQHYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGGLVSDDLIIGLVRDRLTQPDCANGYLFDGFPRTIPQA----DALKSAGIALDYVVEIEVPESDIIERMSGRRVHPASGRSYHVRFNPPKAEGVDDVTGEPLVQRDDDREETVRHRLNVYQNQTRPLVDYYS 183          
BLAST of DY257913 vs. ExPASy Swiss-Prot
Match: KAD_LEGPL (Adenylate kinase OS=Legionella pneumophila (strain Lens) GN=adk PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.299e-50
Identity = 94/187 (50.27%), Postives = 131/187 (70.05%), Query Frame = 1
Query:  220 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSK 780
            RL+L+G PG+GKGTQ+ ++ + Y +  ++TGDMLRAA+A  TPLG+ A++ M+ G LVSDD+++G++ E +K P C +GF+ DGFPRT VQA    E L+     +D V+  A+DD  + ERI+GR IH  SGR YH    PPK PGVDD+TGEPLIQR DD    ++ RL+ +H QT P++ YY +
Sbjct:    2 RLMLLGGPGAGKGTQASLLINRYKIPQISTGDMLRAAIAKGTPLGLSAQKIMESGGLVSDDIIIGLVKERLKNPDCDRGFLFDGFPRTLVQA----EALKDAEIHLDHVIEIAVDDEEIIERISGRRIHQPSGRVYHVVNQPPKNPGVDDITGEPLIQRDDDKEETIRKRLQVYHSQTAPLVQYYKE 184          
The following BLAST results are available for this feature:
BLAST of DY257913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_CLOBL2.004e-5144.55Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_CLOB62.617e-5144.55Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_AZOSE2.617e-5150.27Adenylate kinase OS=Azoarcus sp. (strain EbN1) GN=... [more]
KAD_PROVI3.418e-5146.15Adenylate kinase OS=Prosthecochloris vibrioformis ... [more]
KAD_DIAST4.464e-5147.06Adenylate kinase OS=Diaphorobacter sp. (strain TPS... [more]
KAD_BACSK4.464e-5145.97Adenylate kinase OS=Bacillus clausii (strain KSM-K... [more]
KAD_ACISJ4.464e-5147.06Adenylate kinase OS=Acidovorax sp. (strain JS42) G... [more]
KAD_VIBPA5.830e-5147.47Adenylate kinase OS=Vibrio parahaemolyticus GN=adk... [more]
KAD_BORBR5.830e-5150.00Adenylate kinase OS=Bordetella bronchiseptica GN=a... [more]
KAD_LEGPL1.299e-5050.27Adenylate kinase OS=Legionella pneumophila (strain... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2AF06ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257913 ID=DY257913; Name=DY257913; organism=Citrus clementina; type=EST; length=1103bp
GGCACCTACCCTTTTTCATTCAAACGCAAAAATCAAATCAAAATCAGACT
CTCTCTCTCTCTCTCTCTCTAATATCCGTCCAAAGAGGGAGGAAAACCCT
AAACGGCACCGTTTGCAAAAATGGCGAGCAGTTCAGCGGCGAACCTGGAA
GATGTGCCGTCGGTGGATCTCATGACTGAGCTCCTCCGTCGCATGAAGTG
CGCCTCCAAGCCAGACAAGCGCCTCATTCTCGTTGGCCCACCCGGATCAG
GAAAGGGTACTCAATCGCCCATCATTAAAGATGAATATTGCTTGTGTCAC
TTGGCTACTGGTGATATGTTGAGAGCCGCTGTTGCTGCTAAAACTCCTCT
TGGGATCAAGGCTAAGGAGGCTATGGACAAGGGAGAACTTGTTTCTGATG
ACTTGGTTGTTGGTATCATAGATGAAGCAATGAAGAAACCTTCTTGTCAG
AAAGGTTTCATTCTTGACGGGTTTCCCAGAACTGAGGTCCAAGCTCAGAA
GCTGGACGAGATGCTTGAGAAGCAGGGAAAAAAAGTTGATAAGGTTCTCA
ACTTTGCTATTGATGATGCGGTTTTGGAAGAGAGGATTACTGGTCGCTGG
ATCCACCCTTCAAGTGGCAGGACCTACCACACAAAATTTGCTCCTCCCAA
GGTTCCTGGTGTTGACGATGTAACTGGAGAACCTTTGATTCAACGTAAAG
ATGACACTGCAGCTGTTCTCAAGTCAAGGCTGGAGGCTTTCCACAAGCAA
ACTGAACCGGTAATTGATTATTACTCCAAAAAGGGCATTGTTGCACAACT
ACATGCTGAGAAGCCTCCTCAAGAAGTTACATCTGAGGTGCAGAAAGCAC
TTTCCGCATGATGTGGGCTACAACTGANGTTCATTATATGGTTCATTTAA
ATTTATCAGCAGATGAAACATCTGAAGAACTTTCTTATTCTTTTTTTTTG
GGCTCACGTGTACTTGAATATACTGTTTGAACATGCTGAATCCTTTGATG
TCCGGTTGCTATTTTTGACTTCGGATAATTGCGGCTGGCCCTTTCTTGGA
ATTTGATGAAAAACTGGATTTCCCTTTCAAATAAGAAACATTCCCAAGGT
TTT
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