DY257922

Overview
NameDY257922
Unique NameDY257922
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length571
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14242 contig Ccv1_Contig14242:367..937. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257922 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.186e-16
Identity = 49/132 (37.12%), Postives = 78/132 (59.09%), Query Frame = 2
Query:    2 EHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 397
            ++ +  L    KAGV HKI+ +  PA   L +LI D+    T+DFVF+DADK  Y  Y++  ++L++ GG+I  DN L  G  VA P+A+++  ++    +++ LN  +  D R+    L IADG+TL  +I
Sbjct:  104 DYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGR-VADPNANVEPNLV----AIRALNDKILADKRVTKTMLPIADGITLVTKI 229          
BLAST of DY257922 vs. ExPASy Swiss-Prot
Match: CMTD1_HUMAN (Catechol-O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.311e-15
Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 2
Query:   11 EKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 397
            E G P+ ++A   HKID R  PAL  LD+L+   +  GTFD   VDADK N   Y++R ++L++ GG++     LW G V+  P  D+        + V+ LN+ +  D R+ I  L + DG+TL  +I
Sbjct:  141 ELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEA-GTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVA------AECVRNLNERIRRDVRVYISLLPLGDGLTLAFKI 262          
BLAST of DY257922 vs. ExPASy Swiss-Prot
Match: CMTD1_MOUSE (Catechol-O-methyltransferase domain-containing protein 1 OS=Mus musculus GN=Comtd1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.956e-13
Identity = 47/127 (37.01%), Postives = 71/127 (55.91%), Query Frame = 2
Query:   17 GLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 397
            G P+ ++A V  KID R  PAL  LD+L+   +  GTFD   VDADK N   Y++R ++L++ GGV+     LW G V+ QP      +     + V+ LN+ +  D R+ I  L + DG++L  +I
Sbjct:  143 GRPMWKQAEVEQKIDLRLQPALQTLDELLAAGEA-GTFDIAVVDADKENCTAYYERCLQLLRPGGVLAVLRVLWRGEVL-QPQPRNKTV-----ECVRNLNERILRDARVYISLLPLDDGLSLAFKI 262          
The following BLAST results are available for this feature:
BLAST of DY257922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CAMT1_DICDI1.186e-1637.12Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]
CMTD1_HUMAN1.311e-1537.21Catechol-O-methyltransferase domain-containing pro... [more]
CMTD1_MOUSE7.956e-1337.01Catechol-O-methyltransferase domain-containing pro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2AH02ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257922 ID=DY257922; Name=DY257922; organism=Citrus clementina; type=EST; length=571bp
GGAACACTACGAGAAGGGTCTCCCTATAATTCAAAAAGCTGGTGTTGCCC
ACAAGATTGATTTCAGAGAAGGCCCTGCTCTTCCTCTTCTTGATCAATTG
ATCCAAGACGAAAAATATCATGGGACATTCGACTTCGTCTTTGTTGATGC
TGACAAGAATAACTACATTAATTACCACAAGAGGCTTATTGAGCTTGTGA
AGGTTGGGGGAGTGATTGGCTACGACAACACCTTGTGGGGTGGATCTGTG
GTGGCACAACCTGATGCCGACCTGGATGAGCTAATCTTAGGCTGGAGGGA
TTCTGTGCAGGAACTCAACAAGGCCCTGGCCGTTGATCCAAGGATTGAGA
TTTGCCAGCTCTCCATTGCTGATGGGGTTACATTATGTCGTCGCATTGGC
TGATCCTCTCAATTTTCACTCACGAGACTGGTTGTGTCGTAACTTTTAAA
CTATACTATGTGTGGTTATGGCAGTAAAATCCACAAATAAATTAGACCGA
TGAGTGTTTGGAGAAATGTATTATTGTTTTTCTTAAGTTAATAAATTTTT
AAAAATAAATATTTTATTTTA
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