DY257938

Overview
NameDY257938
Unique NameDY257938
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1262
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14598 contig Ccv1_Contig14598:47..1308. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257938 vs. ExPASy Swiss-Prot
Match: 1433_ENCCU (14-3-3 protein homolog OS=Encephalitozoon cuniculi GN=ECU03_1010 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.657e-52
Identity = 121/253 (47.83%), Postives = 164/253 (64.82%), Query Frame = 2
Query:   74 KDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVE----LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIP---SCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISKLDTLSEESYKDSTLIMQLLRDNLTLWTSDVPEDG---GDEAQ 802
            K  E  +  A L++ AERYD+M   M+    L  E    L V  RNL SV YKN++ +RR+SWR+L S  QK E +   + V  I E  + VE EL +   +++ +I  +++    +    E  +F+ KMKGDYYRY AE  TG E  +V+  + ++Y+ A+  A+  L PT+PI+LGLALN+SVF+YEI+N  E+AC +AK AFDEAI +LDTLSEE Y+DSTLIMQLLRDNLTLWTS   E+G   GDE +
Sbjct:    4 KQYEEALQKANLSDMAERYDDMAKEMRLAVTLAHEDKHILNVMARNLFSVAYKNLVSSRRSSWRMLCSERQKLEGKDPSV-VHVINEKIKVVEEELLRFCDEVLDIITTYILSLEEAQKNIEYNIFFLKMKGDYYRYKAEVVTGPEHSEVSKHAAESYKEATEKAKT-LPPTNPIKLGLALNYSVFHYEILNDSEKACSIAKGAFDEAIKELDTLSEEHYRDSTLIMQLLRDNLTLWTS--REEGNVMGDEGK 252          
BLAST of DY257938 vs. ExPASy Swiss-Prot
Match: 1433G_SHEEP (14-3-3 protein gamma (Fragments) OS=Ovis aries GN=YWHAG PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 7.967e-47
Identity = 108/215 (50.23%), Postives = 127/215 (59.07%), Query Frame = 2
Query:  146 AMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISKLDTLSEESYKDSTLIMQLLRDNLTLWTSDVPEDGG 790
            AMK V  L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK                                                T FY KMKGDYYRYLAE  TG++R  V + S KAY  A   ++  + PTHPIRLGLALN+SVFYYEI             AFD+AI++LDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G
Sbjct:    3 AMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQK------------------------------------------------TSFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEI------------TAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDG 157          
BLAST of DY257938 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.159e-21
Identity = 50/59 (84.75%), Postives = 55/59 (93.22%), Query Frame = 2
Query:  620 IMNSPERACHLAKQAFDEAISKLDTLSEESYKDSTLIMQLLRDNLTLWTSDVPEDGGDE 796
            I+NSP+RAC+LAKQAFDEAIS+LD+L EESYKDSTLIMQLL DNLTLWTSD  EDGGDE
Sbjct:    1 ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNLTLWTSDTNEDGGDE 59          
BLAST of DY257938 vs. ExPASy Swiss-Prot
Match: U4976_SOYBN (UPF0497 membrane protein 6 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.981e-13
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 2
Query:   65 AMDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEER 196
            A  KDRENFVYIAKLAEQAERY+EMV++MK VANLDVELTVEER
Sbjct:    2 AASKDRENFVYIAKLAEQAERYEEMVESMKNVANLDVELTVEER 45          
The following BLAST results are available for this feature:
BLAST of DY257938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
1433_ENCCU1.657e-5247.8314-3-3 protein homolog OS=Encephalitozoon cuniculi... [more]
1433G_SHEEP7.967e-4750.2314-3-3 protein gamma (Fragments) OS=Ovis aries GN=... [more]
1433X_MAIZE1.159e-2184.7514-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]
U4976_SOYBN1.981e-1386.36UPF0497 membrane protein 6 OS=Glycine max PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2BB06ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257938 ID=DY257938; Name=DY257938; organism=Citrus clementina; type=EST; length=1262bp
GGAGTTCTCAGTTCCCATTTCTCAGTTCTCACATTACAGTACTGCTTGTA
AAAGCAAATTATTCGCCATGGACAAAGATCGTGAAAACTTCGTTTACATC
GCCAAGCTTGCTGAACAAGCTGAACGATACGACGAAATGGTTGATGCAAT
GAAAAAGGTAGCGAATCTTGACGTGGAACTGACTGTGGAGGAGAGAAACT
TACTCTCGGTTGGGTATAAGAATGTGATTGGTGCACGTAGAGCATCATGG
AGGATTCTTTCGTCGATAGAGCAGAAAGAAGAGGCCAGAGGGAATGAACT
TAATGTGAAAAGAATTAAAGAGTATAGGCAAAAGGTGGAAGCTGAGCTGT
CGAAGATCAGCACTGATATTATGCAAGTCATTGATGAGCATTTGATCCCT
TCCTGCACCGGAGGTGAATCCACTGTGTTTTACTATAAAATGAAAGGTGA
TTATTATCGGTACTTGGCAGAGTTTAAGACTGGTGATGAGAGGAAAGATG
TTGCTGATCTGTCAATGAAAGCCTATCAGGCAGCTTCTACTACCGCAGAA
GCTGAATTGTCTCCTACCCACCCCATCCGACTTGGTTTGGCCTTGAACTT
CTCAGTTTTTTACTATGAGATTATGAACTCTCCTGAAAGGGCATGCCACC
TTGCAAAGCAGGCCTTTGATGAAGCCATCTCAAAATTGGATACATTAAGT
GAGGAATCTTACAAAGACAGCACGTTGATAATGCAGCTATTGAGGGACAA
CCTCACTCTTTGGACTTCTGACGTACCAGAGGATGGAGGTGATGAAGCCC
AAAAATGGACATCTCTGCTAAAGAGGGTGAGGTGAAAATTGAAGAACCAA
AGGTGGGGTTGTTTTCTTTTTTGGACCAAGTTGCAATCCTTGTTGTTTTC
TGTCCTCCTTAACCCACCCGAACCTGGGAACCCTACCTTATTATACCAAG
GAACCCGCCTTCCTTTTTTACCCCCGGGGGTTTTTCAAAGTTTCAAAAAA
ACCCCCAGTACCGGGTTTTGGGGCGTTTCCCAAAAAGGGGGGGGGTTTCT
CTTCCCTGGCCAAAAATTTTCTGAATTGGACCCCGTTTTTCCTTTTTTCC
CCCCCCAAAATTTAATAAATTTGGGCGCGCCCGGATTTCATTTTTGACCT
TTTTGTGTTATAACACCCCCTTTTCTCCTTTTTTTTTTTTCCCTTTTTTT
TCTGTTTAAAAAATTTTTTTTTTATATTTTTTTTTTTATTTTTTTTTTTT
TTTTTTTTCTTC
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