DY257950

Overview
NameDY257950
Unique NameDY257950
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1320
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257950 vs. ExPASy Swiss-Prot
Match: SPOPL_HUMAN (Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.569e-19
Identity = 72/249 (28.92%), Postives = 115/249 (46.18%), Query Frame = 2
Query:   26 TDVRALFELTLVDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFKRTSL--ETSDYIKDDCLLINCTVGVVRNRLE---GPKQYSIPVPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEIXXXXXXXXXXNMVQHLLAAADLYNVDRXXXXXXXXXXXXXXXXXXXXXXXXXXQHQCPQLKAICLKF 757
            ++VRA F+ +L++   +          +A+ES       +G  WG+K+F +R  L  E +  + DD L + C V VV++ +         ++ VP   + + L +L E+    D  F V  + FKAHK +LAARSPVF A F   + +   ++V + D++P +FK M+ FIYT + P++              M  +LLAAAD Y ++R                           H   QLKA  + F
Sbjct:   96 SEVRAKFKFSLLNAKREET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGHTNTNTLKVPECRLAEDLGNLWENTRFTDCSFFVRGQEFKAHKSVLAARSPVFNAMFEHEMEESKKNRVEINDLDPEVFKEMMRFIYTGRAPNL------------DKMADNLLAAADKYALERLKVMCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDF 324          
BLAST of DY257950 vs. ExPASy Swiss-Prot
Match: SPOPL_MOUSE (Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 3.355e-19
Identity = 73/249 (29.32%), Postives = 114/249 (45.78%), Query Frame = 2
Query:   26 TDVRALFELTLVDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFKRTSL--ETSDYIKDDCLLINCTVGVVRNRLEGPKQYSI---PVPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEIXXXXXXXXXXNMVQHLLAAADLYNVDRXXXXXXXXXXXXXXXXXXXXXXXXXXQHQCPQLKAICLKF 757
            ++VRA F+ +L++   +          +A+ES       +G  WG+K+F +R  L  E +  + DD L + C V VV++ +      S     VP   + + L +L E+    D  F V  + FKAHK +LAARSPVF A F   + +   ++V + D++P +FK M+ F+YT K P++              M  +LLAAAD Y ++R                           H   QLKA  + F
Sbjct:   96 SEVRAKFKFSLLNDKREET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNVSGHTSTNTSKVPECRLAEDLGNLWENTRFTDCCFFVRGKEFKAHKSVLAARSPVFNAMFEHEMEECTKNRVEINDLDPEVFKEMMRFVYTGKAPNL------------DKMADNLLAAADKYALERLKVMCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDF 324          
BLAST of DY257950 vs. ExPASy Swiss-Prot
Match: SPOP_DANRE (Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.722e-19
Identity = 80/285 (28.07%), Postives = 124/285 (43.51%), Query Frame = 2
Query:   26 TDVRALFELTLVDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFKRTSL--ETSDYIKDDCLLINCTVGVVRNRLEGPKQYS---IPVPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEIXXXXXXXXXXNMVQHLLAAADLYNVDRXXXXXXXXXXXXXXXXXXXXXXXXXXQHQCPQLKAICLKFAATPANLGVIMQSEGFKHXXXXXXXXXXXXXKTLAS 865
            ++VRA F+ ++++  G+          +A+ES       +G  WG+K+F +R  L  E +  + DD L + C V VV++ +    Q +   + VP   +   L  L E     D    V  + F+AHK ILAARSPVF A F   + +   ++V + DVE  +FK M+ FIYT K P++              M   LLAAAD Y ++R                           H   QLK   + F    A+   +M++ G+K              ++LAS
Sbjct:   96 SEVRAKFKFSILNAKGEET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPDCRLADELGGLWEHSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEAEVFKEMMFFIYTGKAPNL------------DKMADDLLAAADKYALERLKVMCEDALCTSLSVENAAEILILADLHSADQLKTQAVDFINYHAS--DVMETSGWKSMVASHPHLVAEAYRSLAS 358          
BLAST of DY257950 vs. ExPASy Swiss-Prot
Match: SPOPL_XENLA (Speckle-type POZ protein-like OS=Xenopus laevis GN=spopl PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.474e-19
Identity = 76/256 (29.69%), Postives = 114/256 (44.53%), Query Frame = 2
Query:   29 DVRALFELTLVDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFKRTSL--ETSDYIKDDCLLINCTVGVVRNRLEGPKQYS---IPVPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEIXXXXXXXXXXNMVQHLLAAADLYNVDRXXXXXXXXXXXXXXXXXXXXXXXXXXQHQCPQLKAICLKFAATPANLG 781
            +VRA F+ +L++   +          +A+ES       +G  WG+K++ +R  L  E +  + DD L + C V VV++ +    Q S   + VP   + + +  L E+    D    V  + FKAHK ILAARSPVF A F   + +   ++V ++DV+P +FK M+ FIYT   P V              M   LLAAAD Y ++R                           H   QLKA  + F    + LG
Sbjct:   97 EVRAKFKFSLLNSKNEET--------KAMESQRAYRFVQGKDWGFKKYIRRDFLLDEANGLLPDDKLTLYCEVSVVQDSINISGQSSSNNLKVPECRLAEDMGYLWENRRFTDCSLFVEGKEFKAHKSILAARSPVFSAMFEHPMQESRKNRVYIRDVDPEVFKEMMRFIYTGGTPHV------------DKMADKLLAAADKYALERLKVMCEESLCNNLTVENVADVLILADLHSAEQLKAQAIDFINRCSVLG 332          
BLAST of DY257950 vs. ExPASy Swiss-Prot
Match: TDPZ2_MOUSE (TD and POZ domain-containing protein 2 OS=Mus musculus GN=Tdpoz2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.905e-14
Identity = 74/264 (28.03%), Postives = 110/264 (41.67%), Query Frame = 2
Query:   32 VRALFELTLVDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFKRTSL--ETSDYIKDDCLLINCTVGVVRNRLEGPKQYSIPV---PPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEIXXXXXXXXXXNMVQHLLAAADLYNVDRXXXXXXXXXXXXXXXXXXXXXXXXXXQHQCPQLKAICLKFAATPANLGVIMQSEGFK 808
            VRA FE  + +  G+      S    + +        R   WG+ +F  R SL    +  +  D L + C V +V   L  P Q  IP    P   +   L  L E+ +  D    V    F+AHK+ILAARSPVFRA F   + +R  +   +++++  +FK M+ FIYT K P ++            +M   +LAAAD Y ++                            H   QLK   L F A  A+   + +S G+K
Sbjct:   86 VRAKFEFWIKNSQGEKYQYTQSLNVHSFQ--------RKQNWGFSKFILRDSLLSHRNWLLPKDKLTLCCKVSIVGAILNMPGQNMIPAIKDPRHMLTDDLGKLWENSLFTDCSLLVAGHEFRAHKVILAARSPVFRAMFEHQMEERLANCFEIQELDFQVFKEMMDFIYTGKAPTLHS----------HSMACDVLAAADKYGLEGLKVICEDSLCRNLSVENAAHTLIVADLHSTEQLKTRALHFIAVHAS--EVSKSSGWK 329          
BLAST of DY257950 vs. ExPASy Swiss-Prot
Match: BAT43_CAEEL (BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans GN=bath-43 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 7.239e-14
Identity = 69/273 (25.27%), Postives = 119/273 (43.59%), Query Frame = 2
Query:   26 TDVRALFELTLVDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFKRTSL--ETSDYIKDDCLLINCTVGVVRNRLEGPKQYSIP----VPPSDMGQGLKDLLESEIGCDIVF----EVGD--ETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEIXXXXXXXXXXNMVQHLLAAADLYNVDRXXXXXXXXXXXXXXXXXXXXXXXXXXQHQCPQLKAICLKFAATPANLGVIMQSEGFK 808
            ++VRA F+ ++++   +          +A+ES       +G  WG+K+F +R  L  E +  +  D L I C V VV   +    Q ++     VPP  +   +  L +++   D       ++G   +TF  HK ILAARS VF A F   + + + +   V D+EP + + +L+++YT +   + +            M Q L+AAAD Y +DR                           +   QL+A  + F    AN   +M +EG++
Sbjct:  160 SEVRAKFKFSILNAKREET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPGDRLSIFCEVSVVAETVNVTGQTNVSQLFKVPPCRLADDMYGLFDNKQFSDFTLVCKSDLGSPTQTFHIHKAILAARSRVFSAMFEHHMQESDTNMTTVDDIEPEVMRELLVYMYTGQTKYIEQ------------MAQSLIAAADKYQLDRLKVMCEQALCYQLTTDNASLTLMLADMYSASQLRAHSINFINVNAN--EVMDTEGWE 410          
BLAST of DY257950 vs. ExPASy Swiss-Prot
Match: TDPZ4_MOUSE (TD and POZ domain-containing protein 4 OS=Mus musculus GN=Tdpoz4 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.613e-13
Identity = 65/217 (29.95%), Postives = 104/217 (47.93%), Query Frame = 2
Query:    5 IALASEGTDVRALFELTLVDQSGK--GKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFKRTSLETSDYI--KDDCLLINCTVGVVRNRL----EGPKQYSIPVPPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEIXXXXXXXXXXNMVQHLLAAADLYNV 631
            I L+ E   V A FE+ +++  G+     ++ S F R     P+         G+++F  R S  +   +   DD   + C V V+++      + P+  +I V    +   + +L E+ +  D    V    F+AHK ILAARSPVFRA F   + +R  + V + D++P +FK M+ FIYT K P ++            +M   LLAAAD Y +
Sbjct:   77 ILLSCEKGSVWAKFEVCILNAKGEKCNTERIPS-FSRIQPHQPF---------GFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRP-AIKVTRCTLEDDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHQMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHS----------HSMACDLLAAADRYGL 272          
BLAST of DY257950 vs. ExPASy Swiss-Prot
Match: TDPZ3_MOUSE (TD and POZ domain-containing protein 3 OS=Mus musculus GN=Tdpoz3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 5.188e-12
Identity = 59/212 (27.83%), Postives = 98/212 (46.23%), Query Frame = 2
Query:   11 LASEGTDVRALFELTLVDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFKRTSLETSD--YIKDDCLLINCTVGVVRNRLEGPKQYSIPV---PPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEIXXXXXXXXXXNMVQHLLAAADLYNV 631
            L++  + + A FE  +++  G+       +  R + +    L+Y     G+K+F  R  L +    ++ +D   I C V +V    + P Q   P    P   +   L +L ++ +  D    V    FKAHK ILAARSPVFRA F   + +   + + + D++  +FK M+ FIYT K P ++            +M   +L AAD Y +
Sbjct:   79 LSALESPILAKFEFWIINSQGE------KYQSRKISNVQCFLQYEHR--GFKKFLLRGLLLSHQNWFLPEDQFTICCKVSIVGTVFDMPGQKRTPAIKDPRHMLTDDLGELWDNSLFTDCCLLVAGHEFKAHKAILAARSPVFRAMFEHEMKESLKNPIEIMDLDLDVFKEMMGFIYTGKAPHLHS----------HSMACDVLPAADKYGL 272          
BLAST of DY257950 vs. ExPASy Swiss-Prot
Match: TDPZ1_MOUSE (TD and POZ domain-containing protein 1 OS=Mus musculus GN=Tdpoz1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 5.188e-12
Identity = 61/214 (28.50%), Postives = 95/214 (44.39%), Query Frame = 2
Query:    5 IALASEGTDVRALFELTLVDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFKRTSL--ETSDYIKDDCLLINCTVGVVRNRLEGPKQYSIPV---PPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEIXXXXXXXXXXNMVQHLLAAADLYNV 631
            + L+   + V A F+  +++  G+   K  S            L Y  S  G+K+F  R  L    +  + +D L I C V ++  +   P Q   P    P   +   L +L E+ +  D    V    F+AHK ILAARSPVFRA F   + +     + + ++ P +FK M+ FIYT K P ++            +M   +L AAD Y +
Sbjct:   77 VLLSHLQSPVWAKFKFWIINSQGEKYQKTKSPIVECF------LTYEQS--GFKKFLPRDLLLSHRNCLLPEDQLTICCKVTILGRKYNMPSQNITPAIKDPRHLLTDDLGELWENSLFTDCCLLVAGHEFRAHKAILAARSPVFRAMFEHEMKESLKTPIKIHNLNPQVFKEMMGFIYTGKAPHLHS----------HSMACDVLPAADKYGL 272          
BLAST of DY257950 vs. ExPASy Swiss-Prot
Match: TDPZ5_MOUSE (TD and POZ domain-containing protein 5 OS=Mus musculus GN=Tdpoz5 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.971e-11
Identity = 51/164 (31.10%), Postives = 79/164 (48.17%), Query Frame = 2
Query:  158 GYKRFFKRTSLETSD--YIKDDCLLINCTVGVVRNRLEGPKQYSIPV---PPSDMGQGLKDLLESEIGCDIVFEVGDETFKAHKLILAARSPVFRAQFYGLVGDRNLDKVVVKDVEPSIFKAMLLFIYTDKFPDVYEIXXXXXXXXXXNMVQHLLAAADLYNVD 634
            G+K+F     L +    ++ ++ L + C V +V +    P Q   P    P   +   L +L E+ +  D    V    F+AHK ILAARSPVFRA F   + +R  +   + D++P +FK M+ FIYT K P +             +M   +L AAD Y ++
Sbjct:  120 GFKKFILGDFLISHPRRFLPENKLTLCCKVSIVGSVFGMPGQNITPAIKDPRHLLTDDLGELWENSLFTDCCLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLGNPTEIHDLDPKVFKEMMGFIYTGKAPHLQS----------HSMATDVLTAADKYGLE 273          
The following BLAST results are available for this feature:
BLAST of DY257950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
SPOPL_HUMAN2.569e-1928.92Speckle-type POZ protein-like OS=Homo sapiens GN=S... [more]
SPOPL_MOUSE3.355e-1929.32Speckle-type POZ protein-like OS=Mus musculus GN=S... [more]
SPOP_DANRE5.722e-1928.07Speckle-type POZ protein OS=Danio rerio GN=spop PE... [more]
SPOPL_XENLA7.474e-1929.69Speckle-type POZ protein-like OS=Xenopus laevis GN... [more]
TDPZ2_MOUSE1.905e-1428.03TD and POZ domain-containing protein 2 OS=Mus musc... [more]
BAT43_CAEEL7.239e-1425.27BTB and MATH domain-containing protein 43 OS=Caeno... [more]
TDPZ4_MOUSE1.613e-1329.95TD and POZ domain-containing protein 4 OS=Mus musc... [more]
TDPZ3_MOUSE5.188e-1227.83TD and POZ domain-containing protein 3 OS=Mus musc... [more]
TDPZ1_MOUSE5.188e-1228.50TD and POZ domain-containing protein 1 OS=Mus musc... [more]
TDPZ5_MOUSE1.971e-1131.10TD and POZ domain-containing protein 5 OS=Mus musc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2BD04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257950 ID=DY257950; Name=DY257950; organism=Citrus clementina; type=EST; length=1320bp
GTTTATTGCGTTGGCGAGTGAAGGAACGGACGTGAGGGCGCTGTTTGAGT
TGACATTGGTTGACCAAAGTGGGAAAGGAAAGCATAAAGTTCATAGTCAT
TTTGATCGAGCGTTAGAGAGTGGCCCGTACACCTTGAAGTATCGTGGAAG
CATGTGGGGCTATAAGCGCTTCTTTAAAAGAACATCTCTGGAGACTTCTG
ATTATATTAAGGATGATTGTCTTCTCATCAACTGCACTGTTGGAGTTGTT
AGAAACCGCCTTGAGGGACCAAAACAGTATTCCATACCAGTGCCACCGTC
AGACATGGGCCAGGGTCTTAAGGATTTGCTAGAGTCTGAAATTGGATGTG
ACATAGTTTTTGAGGTTGGTGATGAAACATTTAAAGCTCATAAACTGATA
CTTGCTGCTCGCTCTCCTGTTTTCAGAGCCCAGTTCTATGGGCTTGTTGG
AGATCGTAACTTGGATAAAGTAGTTGTGAAGGACGTTGAACCCTCAATCT
TCAAGGCAATGCTCCTGTTTATATACACCGATAAATTTCCTGATGTATAT
GAAATTACTGGCACAACATCAATGTGCACAACAACCAACATGGTACAGCA
TCTACTGGCTGCAGCTGATCTTTATAATGTAGATCGATTGAAATTGTTGT
GTGAATCAAAATTATGTGAAGAACTAAATGCTGAGACAGTGGCCACAACA
CTCGCACTGGCAGAGCAACATCAGTGTCCCCAGCTTAAGGCTATCTGCTT
GAAGTTTGCTGCAACTCCGGCGAACTTGGGGGTGATAATGCAGTCAGAAG
GGTTCAAGCACTTGGAGGAGAGCTGCCCATCACTGTTGTCCGAGCTCCTA
AAGACATTGGCTTCAGGTGATGATACCTCAAGTCTGTCATCAAATAGGAA
AAGAAGTGGCAGCAGTATATATGCACTAGATCTAGCTGGGAAATGGGGCA
GCAGCAGAGTCAGCAAATCCCAATGGGCAGGCGTGTAACAAGGCGGGTTT
TAAACCTTTTAATCTCTTCAAAAAAACTACATTGCCTAAAAAGGGTTTGG
AGTTGTTTTGGCGAACACCAGTCCCAAGGTTAAACACTTCCATGTTAAAA
ATTAGGAAAGGGCCTCCTAAAGGGTTGCCGGGGTCCTTTAGGTTTTTTCC
AAAAAAAAGGAAATTTAGTGTTTGCCCTGGTCCCCCTAAAAATTTTTTTA
TTAATAAAAAAAATATTTTTTTTCCCCCCCTGTGCTCCCCCTCGTTTCCC
CCCCCCCCCTCCCCCTCCCCCCCCTTCCTTCCAATATCATCATTTTTTTT
TTGTTAAAAAAAAGTGGGTG
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