DY257952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_ASPOR (ATP-dependent RNA helicase eIF4A OS=Aspergillus oryzae GN=tif1 PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.376e-58 Identity = 116/294 (39.46%), Postives = 181/294 (61.56%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKTA F I AL+K+D + Q +IL PTRELA Q +V +G +NI GGT++++D+ L + ++VGTPGR+ D+ ++ V ++DEAD++LS F + + + LP + Q+++ SAT P V + K+++ P ++ ELTL+GI Q+Y VE E K+ L+ L+ + I Q++IFCN+ +V+ L K+T ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G Sbjct: 92 AQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNITCHACIGGTAVREDMKALGEGPEVVVGTPGRVHDMIQRRVLKTDHLKQFILDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQSQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKG 385 HSP 2 Score: 23.8682 bits (50), Expect = 1.376e-58 Identity = 10/28 (35.71%), Postives = 17/28 (60.71%), Query Frame = 2 Query: 875 GIAVNLITYEDRFNLYRIEQELGTEINK 958 G+A+N +T +D + IEQ T+I + Sbjct: 385 GVAINFVTADDVRMMREIEQFYSTQIEE 412
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_USTMA (ATP-dependent RNA helicase eIF4A OS=Ustilago maydis GN=TIF1 PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 1.376e-58 Identity = 116/294 (39.46%), Postives = 179/294 (60.88%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKTA F I L++ID +Q +IL PTRELA Q +V LG ++ I GGT++++D+ +L + ++VGTPGR+ D+ + M +DEAD++LS F+ + ++ + LP + Q ++ SAT P V + K+++ P ++ DELTL+GI Q+Y VE E K+ L L+ + I Q++IFCN+ +V+ L K+T ++ +H M Q R + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G Sbjct: 82 AQSGTGKTATFSIAILQRIDPSIKAVQALILAPTRELAQQIQKVVIALGDYMKIDCHACIGGTNVREDMAKLNEGAQVVVGTPGRVYDMINRRAFKTDQLKMFCLDEADEMLSRGFKDQMYEVFQLLPQDTQCVLLSATMPQEVLEVTKKFMRDPIRILVKRDELTLEGIKQFYVAVEKEDWKLDTLCDLYETVTITQAVIFCNTRRKVDWLTDKLTSREFTVSAMHGDMEQAQREVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKG 375 HSP 2 Score: 24.2534 bits (51), Expect = 1.376e-58 Identity = 11/28 (39.29%), Postives = 18/28 (64.29%), Query Frame = 2 Query: 875 GIAVNLITYEDRFNLYRIEQELGTEINK 958 G+A+N +T +D L IEQ T+I++ Sbjct: 375 GVAINFVTSDDVRMLRDIEQFYSTQIDE 402
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A3_ORYSJ (Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica GN=Os02g0146600 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.435e-58 Identity = 122/294 (41.50%), Postives = 180/294 (61.22%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKTA FC L+++D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH++VGTPGR+ D+ ++ M V+DEAD++LS F+ + + + LP Q+ +FSAT P + K++ KP ++ DELTL+GI Q+Y VE E K+ L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P PE YLHR+GRSGRFG G Sbjct: 85 AQSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKG 378
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: RH34_ARATH (DEAD-box ATP-dependent RNA helicase 34 OS=Arabidopsis thaliana GN=RH34 PE=2 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 1.795e-58 Identity = 115/294 (39.12%), Postives = 181/294 (61.56%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKT+ I + ++ + +QV++L P+RELA QT + + +G H NIQ GG S+ +DI +L + VH + GTPGR+ D+ K+G K +LV+DE+D++LS + + + R LP + Q+ + SAT P + + +K++ P ++ DELTL+GI QYY V+ E K L L+ +L INQ+IIFCN+ +V+ L +K+ + +H Q R+ + + FR+ R L+ +D++ RGID+Q V+ VIN+D P NPE Y+HR+GR+GRFG G Sbjct: 66 AQSGTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREG 359 HSP 2 Score: 24.2534 bits (51), Expect = 1.795e-58 Identity = 10/28 (35.71%), Postives = 17/28 (60.71%), Query Frame = 2 Query: 875 GIAVNLITYEDRFNLYRIEQELGTEINK 958 G+A+N + D +L IE+ GT+I + Sbjct: 359 GVAINFVKSSDMKDLKDIERHYGTKIRE 386
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_WHEAT (Eukaryotic initiation factor 4A OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.874e-58 Identity = 121/294 (41.16%), Postives = 180/294 (61.22%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKTA FC L+++D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH++VGTPGR+ D+ ++ + M V+DEAD++LS F+ + + + LP Q+ +FSAT P + K++ KP ++ DELTL+GI Q+Y VE E K+ L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P PE Y HR+GRSGRFG G Sbjct: 85 AQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDIVRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYQHRIGRSGRFGRKG 378
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.874e-58 Identity = 119/294 (40.48%), Postives = 180/294 (61.22%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKTA FC L+++D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH++VGTPGR+ D+ ++ M V+DEAD++LS F+ + + + LP Q+ +FSAT P + K++ KP ++ D++TL+GI Q+Y V+ E K+ L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P PE YLHR+GRSGRFG G Sbjct: 84 AQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKG 377
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.874e-58 Identity = 120/294 (40.82%), Postives = 180/294 (61.22%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKTA FC L+++D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH++VGTPGR+ D+ ++ + M V+DEAD++LS F+ + + + LP Q+ +FSAT P + K++ KP ++ DELTL+GI Q+Y V+ E K+ L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P PE YLHR+G SGRFG G Sbjct: 84 AQSGTGKTATFCSGILQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGHSGRFGRKG 377
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.874e-58 Identity = 119/294 (40.48%), Postives = 180/294 (61.22%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKTA FC L+++D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH++VGTPGR+ D+ ++ M V+DEAD++LS F+ + + + LP Q+ +FSAT P + K++ KP ++ D++TL+GI Q+Y V+ E K+ L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P PE YLHR+GRSGRFG G Sbjct: 84 AQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKG 377
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: RH2_ORYSJ (DEAD-box ATP-dependent RNA helicase 2 OS=Oryza sativa subsp. japonica GN=Os01g0639100 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.340e-58 Identity = 114/294 (38.78%), Postives = 180/294 (61.22%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKT+ + + +D +Q +IL PTRELA QT +V +G +NIQV GG S+ +DI +L VH++ GTPGR+ D+ K+ + +L++DEAD++L F+ + + R+LP Q+ + SAT P + + K++ P ++ DELTL+GI Q++ VE E K L L+ L I Q++IFCN+ +V+ L +++ ++ +H M Q R+ + +FR+GA R L+ TD++ RG+D+Q V++VIN+D P N E Y+HR+GRSGRFG G Sbjct: 75 AQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKG 368 HSP 2 Score: 23.0978 bits (48), Expect = 2.340e-58 Identity = 11/28 (39.29%), Postives = 17/28 (60.71%), Query Frame = 2 Query: 875 GIAVNLITYEDRFNLYRIEQELGTEINK 958 G+A+N + ED L IEQ T+I++ Sbjct: 368 GVAINFVKKEDIRILRDIEQYYSTQIDE 395
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_YEAST (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae GN=TIF1 PE=1 SV=3) HSP 1 Score: 226.483 bits (576), Expect = 2.448e-58 Identity = 118/294 (40.14%), Postives = 179/294 (60.88%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKT F I AL++ID Q ++L PTRELALQ +V L H++I+V GGTS +D L + ++VGTPGR+ D ++ M ++DEAD++LS F+ + Q+ LP Q+++ SAT P V + K+++ P ++ DELTL+GI Q+Y VEE + K CL L+ + + Q++IFCN+ +VE L K+ ++ I++ + Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G Sbjct: 66 AQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGL-RDAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKG 358 The following BLAST results are available for this feature:
BLAST of DY257952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257952 ID=DY257952; Name=DY257952; organism=Citrus clementina; type=EST; length=1192bpback to top |