DY257952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A1_RABIT (Eukaryotic initiation factor 4A-I (Fragment) OS=Oryctolagus cuniculus GN=EIF4A1 PE=1 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 2.771e-56 Identity = 114/295 (38.64%), Postives = 179/295 (60.68%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV-HLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKTA F I L++I+ D Q ++L PTRELA Q +V LG ++ GGT+++ ++ +L H++VGTPGR+ D+ + K M V+DEAD++LS F+ + + + L +N Q+++ SAT P V + K+++ P ++ +ELTL+GI Q+Y VE E K+ L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G Sbjct: 68 AQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKG 362 HSP 2 Score: 25.409 bits (54), Expect = 2.771e-56 Identity = 11/28 (39.29%), Postives = 17/28 (60.71%), Query Frame = 2 Query: 875 GIAVNLITYEDRFNLYRIEQELGTEINK 958 G+A+N++T ED+ L IE T I + Sbjct: 362 GVAINMVTEEDKRTLRDIETFYNTSIEE 389
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: FAL1_LODEL (ATP-dependent RNA helicase FAL1 OS=Lodderomyces elongisporus GN=FAL1 PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 2.993e-56 Identity = 115/294 (39.12%), Postives = 177/294 (60.20%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKTA F I LE +D + Q ++L PTRELA Q V K LG ++NIQ GG ++ DI RL Q ++ GTPGR+LD+ K+ + ML++DEAD+L + F+ + ++ + LP Q+++ SAT V + K+ P ++ +E++L GI QYY E E K L L+ L I Q++IFCN+ +V L ++ + ++ +H M Q+ R+ + +DFR+G R L+ TD++ RGID+Q +++VIN+D P + E Y+HR+GRSGRFG G Sbjct: 70 AQSGTGKTATFSIGMLEVLDSKSKECQALVLSPTRELATQIQNVIKHLGDYMNIQTYACIGGKNVGTDIKRLQQGQQIVSGTPGRVLDVIKRRNLSTRHIKMLILDEADELFTKGFKEQIYEIYKHLPPGVQVVVVSATLTHEVLEMTGKFTTDPVKILVKREEVSLSGIKQYYIQCEKEDWKFDTLCDLYDNLTITQAVIFCNTKIKVNWLTDQMRKQNFTVVAMHGDMKQEERDAIMNDFRSGNSRVLISTDVWARGIDVQQISLVINYDLPLDKENYIHRIGRSGRFGRKG 363
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: EXP9_STRR6 (Probable ATP-dependent RNA helicase exp9 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=exp9 PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.485e-55 Identity = 115/293 (39.25%), Postives = 176/293 (60.07%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL-MDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ GTGKTAAF +P LEKI + IQ +++ PTRELA+Q+ + G+ ++V GG+S++ I L H++VGTPGR+LDL K+ L+D L++DEAD++L+ F +E +I +P NRQ L+FSAT P +K ++++ P + + ELT + + QYY V+E++K + L Q +I+F + RV+ L + + G+ IH + Q+ R RV DF+NG LV TD+ RG+DI V V N+D P++PE+Y+HR+GR+GR G G Sbjct: 45 AQTGTGKTAAFGLPTLEKIRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAIISRVPENRQTLLFSATMPDAIKRIGVQFMKAPEHVKIAAKELTTELVDQYYIRVKEQEKFDTMTRLMDVAQPELAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSG 337
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: EXP9_STRPN (Probable ATP-dependent RNA helicase exp9 OS=Streptococcus pneumoniae GN=exp9 PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.485e-55 Identity = 115/293 (39.25%), Postives = 176/293 (60.07%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL-MDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ GTGKTAAF +P LEKI + IQ +++ PTRELA+Q+ + G+ ++V GG+S++ I L H++VGTPGR+LDL K+ L+D L++DEAD++L+ F +E +I +P NRQ L+FSAT P +K ++++ P + + ELT + + QYY V+E++K + L Q +I+F + RV+ L + + G+ IH + Q+ R RV DF+NG LV TD+ RG+DI V V N+D P++PE+Y+HR+GR+GR G G Sbjct: 45 AQTGTGKTAAFGLPTLEKIRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAIISRVPENRQTLLFSATMPDAIKRIGVQFMKAPEHVKIAAKELTTELVDQYYIRVKEQEKFDTMTRLMDVAQPELAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSG 337
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A2_CHICK (Eukaryotic initiation factor 4A-II OS=Gallus gallus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.014e-55 Identity = 113/295 (38.31%), Postives = 183/295 (62.03%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKTA F I L++++ D Q ++L PTRELA Q +V LG ++ GGT++++++ +L + H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L N Q+++ SAT P+ V + K++++P ++ +ELTL+GI Q+Y VE E K+ L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G Sbjct: 77 AQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKG 371 HSP 2 Score: 22.7126 bits (47), Expect = 3.014e-55 Identity = 10/28 (35.71%), Postives = 16/28 (57.14%), Query Frame = 2 Query: 875 GIAVNLITYEDRFNLYRIEQELGTEINK 958 G+A+N +T ED+ L IE T + + Sbjct: 371 GVAINFVTEEDKRILRDIETFYNTTVEE 398
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A1_PANTR (Eukaryotic initiation factor 4A-I OS=Pan troglodytes GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 3.309e-55 Identity = 114/295 (38.64%), Postives = 179/295 (60.68%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPV-HLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKTA F I L++I+ D Q ++L PTRELA Q +V LG ++ GGT+++ ++ +L H++VGTPGR+ D+ + K M V+DEAD++LS F+ + + + L +N Q+++ SAT P V + K+++ P ++ +ELTL+GI Q+Y VE E K+ L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G Sbjct: 76 AQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKG 370
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: CSHA_GEOKA (DEAD-box ATP-dependent RNA helicase cshA OS=Geobacillus kaustophilus GN=cshA PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 2.145e-54 Identity = 111/293 (37.88%), Postives = 176/293 (60.07%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL-MDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ GTGKTAAF IP +EK++ N+ +Q +++ PTRELA+Q S+ ++G ++V+ GG ++ I L + H++VGTPGRI+D +G L+ +V+DEAD++L+ F +E ++ +PA RQ L+FSAT P ++ ++++ +P ++ + E+T+ I QYY V E++K L L +I+F + RV+ LA+ + GY+ IH + Q R V F+ GA LV TD+ RG+DI V V NFD P++PE+Y+HR+GR+GR G G Sbjct: 46 AQTGTGKTAAFGIPIVEKVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTG 338
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A2_RAT (Eukaryotic initiation factor 4A-II OS=Rattus norvegicus GN=Eif4a2 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 9.464e-54 Identity = 111/295 (37.63%), Postives = 181/295 (61.36%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKTA F I L++++ + Q ++L PTRELA Q +V LG ++ GGT++++++ +L + H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L + Q+++ SAT P V + K+++ P ++ +ELTL+GI Q+Y VE E K+ L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G Sbjct: 77 AQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKG 371 HSP 2 Score: 22.7126 bits (47), Expect = 9.464e-54 Identity = 10/28 (35.71%), Postives = 16/28 (57.14%), Query Frame = 2 Query: 875 GIAVNLITYEDRFNLYRIEQELGTEINK 958 G+A+N +T ED+ L IE T + + Sbjct: 371 GVAINFVTEEDKRILRDIETFYNTTVEE 398
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A2_PONAB (Eukaryotic initiation factor 4A-II OS=Pongo abelii GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 9.464e-54 Identity = 111/295 (37.63%), Postives = 181/295 (61.36%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKTA F I L++++ + Q ++L PTRELA Q +V LG ++ GGT++++++ +L + H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L + Q+++ SAT P V + K+++ P ++ +ELTL+GI Q+Y VE E K+ L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G Sbjct: 77 AQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKG 371 HSP 2 Score: 22.7126 bits (47), Expect = 9.464e-54 Identity = 10/28 (35.71%), Postives = 16/28 (57.14%), Query Frame = 2 Query: 875 GIAVNLITYEDRFNLYRIEQELGTEINK 958 G+A+N +T ED+ L IE T + + Sbjct: 371 GVAINFVTEEDKRILRDIETFYNTTVEE 398
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A2_MOUSE (Eukaryotic initiation factor 4A-II OS=Mus musculus GN=Eif4a2 PE=2 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 9.464e-54 Identity = 111/295 (37.63%), Postives = 181/295 (61.36%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A++GTGKTA F I L++++ + Q ++L PTRELA Q +V LG ++ GGT++++++ +L + H++VGTPGR+ D+ + K M V+DEAD++LS F+ + ++ + L + Q+++ SAT P V + K+++ P ++ +ELTL+GI Q+Y VE E K+ L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G Sbjct: 77 AQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKG 371 HSP 2 Score: 22.7126 bits (47), Expect = 9.464e-54 Identity = 10/28 (35.71%), Postives = 16/28 (57.14%), Query Frame = 2 Query: 875 GIAVNLITYEDRFNLYRIEQELGTEINK 958 G+A+N +T ED+ L IE T + + Sbjct: 371 GVAINFVTEEDKRILRDIETFYNTTVEE 398 The following BLAST results are available for this feature:
BLAST of DY257952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257952 ID=DY257952; Name=DY257952; organism=Citrus clementina; type=EST; length=1192bpback to top |