DY257952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: RRP3_PHANO (ATP-dependent rRNA helicase RRP3 OS=Phaeosphaeria nodorum GN=RRP3 PE=3 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 3.324e-39 Identity = 100/300 (33.33%), Postives = 160/300 (53.33%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPAN-RQILMFSATFPVTVKDFKDKYLQKPYVINLMDEL--TLKGITQYYAFVEERQK----VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ G+GKTAAF +P L+ + +I+ PTRELA Q SQ LG +N++ GG + + L + H++V +PGR+LD L LK LV+DEAD+LL +F S++++ + LP + R +FSAT V+ + L+ P +++ + + Q Y + + K +H LN + +I+F +VN + LA + LG+ +H ++ Q +R + F+ A LV TD+ RG+DI +V++V+NFD P + ETY+HRVGR+ R G G Sbjct: 159 AETGSGKTAAFVLPILQALLDKPQAYFGLIMAPTRELAYQISQQVDALGSIINVKCATLVGGMDMVPQAIALSKRPHIIVASPGRLLDHLENTKGFSLKHLKYLVLDEADRLLDLDFGDSLDKIFKVLPRDDRHTYLFSATMSSKVESLQRAALKNPVRVSISSSSHQVVSTLLQSYMLIPHKYKDLYLIHLLNDNIG----HATILFTRTVNETQRLAVLLRTLGFQALPLHGQLSQSNRLGALNKFKAKARDILVATDVAARGLDIPSVDLVVNFDLPHDSETYVHRVGRTARAGKSG 454
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: RH36_ARATH (DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana GN=RH36 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.324e-39 Identity = 102/310 (32.90%), Postives = 167/310 (53.87%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI---LDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYAFVEERQK----VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG*L*I*LLTRT 908 A+ G+GKTAAF +P L ++ +D + +++ PTRELA Q ++ K LG LN++ V GG + M L H+++ TPGRI L+ + + LV+DEAD++L FQ + + + LP +RQ L+FSAT ++ + K Y + L T+ +TQ + F ++ K VH L+ + K I ++IF ++ + L+ + EL +H+ Q R F++G L+ TD+ +RG+DI V++VIN+D P++P Y+HRVGR+ R G G L + ++T T Sbjct: 102 AQTGSGKTAAFALPILHRLAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDK-GIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGR-GGLAVSIITET 409
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: HAS1_YARLI (ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica GN=HAS1 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.324e-39 Identity = 99/296 (33.45%), Postives = 162/296 (54.73%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQ----DNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQK-PYVINLMDE---LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGR 863 AK G+GKT AF IPA+E + + N V+++ PTRELALQ V ++L + + + + GG + + + +L + V+LLV TPGR+LD L + K+ L++DEAD++L F+ ++++I+ LP RQ ++FSAT V+D L+K P +N+ + T +G+ Q Y + ++ L + + + I+F +S N V+ + + + +H K Q R F +F N L+CTD+ RG+DI V+ +I FD P +P Y+HRVGR+ R Sbjct: 175 AKTGSGKTLAFLIPAIEMLRKLKFKPRNGTGVIVVSPTRELALQIYGVARDLMANHSQTLGIVIGGNNRRQEEEKLNKGVNLLVCTPGRLLDHLQNSQGFVFKNLKALIIDEADRILEIGFEQEMKEIIKILPKERQSMLFSATQTTKVEDLARISLKKGPLYLNVDEHNVSSTAEGLEQGYVVCDSDKRFLLLFSFLKRNAGKKIIVFLSSCNSVKFYGELLNYIDLPVLDLHGKQKQQKRTNTFFEFINAKQGVLICTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTAR 470
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: HAS1_ASPNC (ATP-dependent RNA helicase has1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=has1 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.324e-39 Identity = 102/297 (34.34%), Postives = 162/297 (54.55%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKID----QDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPAN-RQILMFSATFPVTVKDFKDKYLQK-PYVINL---MDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGR 863 AK G+GKT +F IPA+E + + N V+++ PTRELALQ V +EL H + + GG + + + +L + V+LL+ TPGR+LD L + K+ LV+DEAD++L F+ + Q+++ LP+ RQ ++FSAT V+D L+ P IN+ + T++G+ Q Y E ++ L + + + I+F +S N V+ A+ + + +H K Q R F +F N L+CTD+ RG+DI AV+ +I FD P + Y+HRVGR+ R Sbjct: 169 AKTGSGKTLSFLIPAVEMLSALRFKPRNGTGVLVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSEERQTMLFSATQTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKIIVFFSSCNCVKYHAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDTRDYVHRVGRTAR 465
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP5_ASHGO (ATP-dependent RNA helicase DBP5 OS=Ashbya gossypii GN=DBP5 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.324e-39 Identity = 102/303 (33.66%), Postives = 164/303 (54.13%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIR---FLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFV-EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP------KNPETYLHRVGRSGRFGHLG 878 +++GTGKTAAF + L ++D Q + L P+R LA QT +V +E+GK I + + K+ + H++VGTPG +LDL ++ + L V+DEAD +L Q +Q IR FLP + Q+++FSATF +V+++ + + + L +E+ + I Q + +ER K L L+ L I SIIF + +L ++ G+ +H + R+R+ DFR G + L+ T++ RGIDI V++V+N+D P +P TY+HR+GR+GRFG G Sbjct: 125 SQSGTGKTAAFSLTMLSRVDVAVPATQAICLAPSR-LARQTLEVIQEMGKFTKIASQLIVPDSYEKNKAIN----AHIIVGTPGTVLDLMRRKMIQLGKVKTFVLDEADNMLDK--QGLGDQCIRVKKFLPKDTQLVLFSATFDDSVREYARRVVPNANSLELQRNEVNVSAIKQLFMDCNDERHKFTVLCDLYGLLTIGSSIIFVQTKQTANMLYTELKREGHQVSILHGDLQSADRDRLIGDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPMTANGQPDPSTYVHRIGRTGRFGRTG 420
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP2_CANAL (ATP-dependent RNA helicase DBP2 OS=Candida albicans GN=DBP2 PE=3 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 3.324e-39 Identity = 96/303 (31.68%), Postives = 161/303 (53.14%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL--MDELTLKGITQYYAFVEERQK----VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A G+GKT ++C+P++ I+ + V++L PTRELA+Q C + GK I+ GG I L + V + + TPGR++D+ + G LK + LV+DEAD++L F+P + +++ + +RQ LM+SAT+P V+ YL P + + ++ ITQ ++E K V L + ++ + N+ ++F ++ + + + G+ IH Q+ R+ V +FR G +V TD+ RGID++ + VIN+D P N E Y+HR+GR+GR G G Sbjct: 171 AATGSGKTLSYCLPSIVHINAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNE-KDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASG 472
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DB10_NICSY (ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.324e-39 Identity = 105/302 (34.77%), Postives = 160/302 (52.98%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQ----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL--MDELTL-KGITQYYAFV---EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 AK G+GKT + +PA + Q Q +++L PTRELA Q + GK I GG + L + V ++V TPGR+ D+ + L S LV+DEAD++L F+P + ++++ +P RQ LM++AT+P V+ L +N+ +DEL K ITQ+ V E++++V L SK ++ IIFC++ + L++ +T + IH Q R+ V FR G LV TD+ RG+DI+ + VVIN+DFP E Y+HR+GR+GR G G Sbjct: 189 AKTGSGKTLGYLMPAFIHLQQRRKNPQLGPTILVLSPTRELATQIQAEAVKFGKSSRISCTCLYGGAPKGPQLRELSRGVDIVVATPGRLNDILEMRRVSLGQVSYLVLDEADRMLDMGFEPQIRKIVKEVPVQRQTLMYTATWPKGVRKIAADLLVNSVQVNIGNVDELVANKSITQHIEVVLPMEKQRRVE--QILRSKEPGSKIIIFCSTKKMCDQLSRNLTR-NFGAAAIHGDKSQGERDYVLSQFRAGRSPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGASG 487
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: RH20_ARATH (DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana GN=RH20 PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 5.670e-39 Identity = 92/300 (30.67%), Postives = 157/300 (52.33%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY--VINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ G+GKT ++ +PA+ ++ + V++L PTRELA+Q Q + G I+ GG + L + V +++ TPGR++D+ + L+ + LV+DEAD++L F P + +++ + +RQ L +SAT+P V+ K+L PY +I D + I Q + E QK + L L + I +F ++ + + +++ G+ IH Q R+ V +FR+G + TD+ RG+D++ V VIN+DFP + E Y+HR+GR+GR G G Sbjct: 143 AETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKG 442
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: HAS1_LODEL (ATP-dependent RNA helicase HAS1 OS=Lodderomyces elongisporus GN=HAS1 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 5.670e-39 Identity = 103/297 (34.68%), Postives = 162/297 (54.55%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKID----QDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLP-ANRQILMFSATFPVTVKDFKDKYLQK-PYVINLMDEL---TLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGR 863 AK G+GKT AF +PA+E + + N V+I+ PTRELALQ V ++L ++ + + GG + + +L + V+LLV TPGR+LD L + + LV+DEAD++L F+ ++Q+I+ LP +RQ ++FSAT V+D L+ P IN++ E T G+ Q Y + ++ L + + + I+F +S N V+ ++ + + +H K Q R F +F N LVCTD+ RG+DI AV+ +I FD P +P Y+HRVGR+ R Sbjct: 137 AKTGSGKTLAFLLPAVELLYSLKIKPRNGTAVIIITPTRELALQIFGVARQLMEYHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLLDHLKNTQGFVFLNLKALVIDEADRILEIGFEEEMKQIIKILPNEDRQTMLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRNIKKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTAR 433
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: HAS1_SCHPO (ATP-dependent RNA helicase has1 OS=Schizosaccharomyces pombe GN=has1 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 7.405e-39 Identity = 102/297 (34.34%), Postives = 164/297 (55.22%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKID----QDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPA-NRQILMFSATFPVTVKDFKDKYLQK-PYVINL---MDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGR 863 AK G+GKT AF IP +E + + N V+I+ PTRELALQ V KEL K+ + + GG + + + +L + V+LLV TPGR+LD L + ++ LV+DEAD++L F+ + Q+++ LP+ NRQ L+FSAT V+D L+ P +N+ T++G+ Q Y V+ ++ L + + + I+F +S V+ +A+ + + +H K Q R F +F N L+CT++ RG+DI AV+ ++ +D P +P Y+HRVGR+ R Sbjct: 133 AKTGSGKTLAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFGIVIGGANRRAEADKLVKGVNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQTLLFSATQTTKVEDLARISLKPGPLYVNVDSGKPTSTVEGLEQGYVVVDSDKRFLLLFSFLKRNLKKKVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVGRTAR 429 The following BLAST results are available for this feature:
BLAST of DY257952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257952 ID=DY257952; Name=DY257952; organism=Citrus clementina; type=EST; length=1192bpback to top |