DY257952

Overview
NameDY257952
Unique NameDY257952
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1192
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP5_BOTFB (ATP-dependent RNA helicase dbp5 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp5 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 4.800e-38
Identity = 103/304 (33.88%), Postives = 160/304 (52.63%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVI-QVVILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFV-EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKN--------PETYLHRVGRSGRFGHLG 878
            +++GTGKTAAF I  L ++D       Q + L P+RELA Q   V + +G+ ++ + V     G   ++  +       ++VGTPG ++DL K+         +L +DEAD +L  +        ++ +    QIL+FSATFP  V  F   +  +   I L  DELT+ GI Q +     E  K   L  L+  + I  SIIF    +    +A+++T+ G+    +H       R++V  DFR G  + L+ T++  RGID+Q+V++VIN+D P          PETYLHR+GR+GRFG +G
Sbjct:  115 SQSGTGKTAAFVITILSRLDFSKPTTPQALCLAPSRELARQIEGVIRSIGQFVDGLTVQAAIPGAVERNAKVNAM----VVVGTPGTVMDLIKRRSIDASQMKILCLDEADNMLDQQGLGDQCMRVKSMIRVEQILLFSATFPDEVYGFAQDFSPRANEIKLKRDELTVSGIKQMFMDCPNEVGKYEILVKLYGLMTIGSSIIFVKRRDTASNIAERLTKEGHKVAAVHGAFEGSERDQVLEDFRQGKAKVLITTNVLARGIDVQSVSMVINYDVPMKGRSDSDPPPETYLHRIGRTGRFGRVG 414          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP3_CANGA (ATP-dependent RNA helicase DBP3 OS=Candida glabrata GN=DBP3 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 4.800e-38
Identity = 102/304 (33.55%), Postives = 163/304 (53.62%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNV---IQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLI-RFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL--MDELTL-KGITQYYAFVEERQKVHCLNTLFSKLQI-----NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A+ G+GKT AF +PA+  +   ++    I+V+++ PTRELA Q       L + + I   V  GG   KDD  R     +++V TPGR+LDL ++G   L     +V+DEAD++L   F+  ++++I +    +RQ LMF+AT+P  V++    ++++P  +++   DEL+  K ITQ    V+ R K   L  L  K Q      ++ +IF         + + +   GY    IH  + Q  R +  ++F++G    L+ TD+  RG+DI  V  VIN  FP   E Y+HR+GR+GR G  G
Sbjct:  172 AETGSGKTFAFGVPAINNLLTSSSKPKGIKVLVISPTRELASQIYDNLVLLTQKVGIDCCVVYGGVP-KDDQRRQIAKSNVVVATPGRLLDLIEEGSVDLSPVDYMVLDEADRMLEKGFEEDIKRIIGQTKSKDRQTLMFTATWPKEVRELASTFMKEPVKVSIGNRDELSANKRITQIVEVVDPRSKERKLLDLLKKYQSGPKKNDKVLIFALYKKEASRVERNLNYNGYKVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTG 474          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP2_AJECN (ATP-dependent RNA helicase DBP2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 4.800e-38
Identity = 93/303 (30.69%), Postives = 161/303 (53.14%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL--MDELTLKGITQYYAFVEERQK----VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A+ G+GKT  +C+PA+  I+    +       V++L PTRELA+Q      + GK   I+     GG      I  L + V + + TPGR++D+ + G   L+  + LV+DEAD++L   F+P + +++  +  +RQ  M+SAT+P  V+     +L     +N+  MD      ITQ    V E +K       L+ +    + ++ +IF  +    + + + + + G+    IH    Q+ R+ V ++F+ G    +V TD+ +RGID++ +  V+N+D+P N E Y+HR+GR+GR G  G
Sbjct:  169 AETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLTRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKDVRQLAQDFLHDYIQVNIGSMDLSANHRITQIVEIVSEFEKRDRMAKHLDRIMEANKHSKVLIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKG 471          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: YFML_BACSU (Putative ATP-dependent RNA helicase yfmL OS=Bacillus subtilis GN=yfmL PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 6.269e-38
Identity = 91/290 (31.38%), Postives = 159/290 (54.83%), Query Frame = 3
Query:   12 GTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKG-ITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            GTGKT A+ +P LE+I  +    Q VIL P+REL +Q  QV ++      ++     GG ++K  + +L +  H++VGTPGR+ +L K     + +   +V+DE D+L+ PE + +++Q+I+    +RQ+L FSAT     +D   +  Q+P V+ +       G +   Y   ++R KV  L  L S+L+  Q+++F   +  + + A+K+         +H++  +  R ++   F +G    L+ TD+  RG+DI+ +  VI+ D P + + Y+HR GR+GR G  G
Sbjct:   51 GTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKAKKLKMHEVKTIVLDETDQLVLPEHRETMKQIIKTTLRDRQLLCFSATLKKETEDVLRELAQEPEVLKVQRSKAEAGKVKHQYLICDQRDKVKLLQKL-SRLEGMQALVFVRDIGNLSVYAEKLAYHHVELGVLHSEAKKMERAKIIATFEDGEFPLLLATDIAARGLDIENLPYVIHADIP-DEDGYVHRSGRTGRAGKEG 338          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DDX10_CHICK (Probable ATP-dependent RNA helicase DDX10 OS=Gallus gallus GN=DDX10 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 6.269e-38
Identity = 102/298 (34.23%), Postives = 161/298 (54.03%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQ----DNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDEL---TLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITEL--GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRF 866
            AK G+GKT AF +PALE + +      + + V+I+ PTRELA QT +V +++GK+ +    +  GG  LK++  R++  +++L+ TPGR+L  + +       D  ML++DEAD++L   F  ++  +I  LP  RQ L+FSAT   +VKD     L+ P  + + ++    T   + Q Y   E + K++ L +        +SI+F  S   V+ L +   +L  G     +H K  Q  R  V+  F       L  TD+  RG+D  AVN VI FD P++  TY+HRVGR+ R+
Sbjct:  117 AKTGSGKTLAFIVPALELLYRLQWTSADGLGVLIISPTRELAFQTFKVLRKVGKNHDFSAGLIIGGKDLKEESERIHH-INMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYIVCELQHKINVLYSFLRSHLKKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRMEVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARY 413          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP2_PICGU (ATP-dependent RNA helicase DBP2 OS=Pichia guilliermondii GN=DBP2 PE=3 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 6.269e-38
Identity = 95/303 (31.35%), Postives = 160/303 (52.81%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQD-----NNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL--MDELTLKGITQYYAFVEERQK----VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A  G+GKT ++C+P++  I+        +   V++L PTRELA+Q  Q C + G    I+     GG      I  L + V + + TPGR++D+ + G   L+  + LV+DEAD++L   F+P + +++  +  +RQ LM+SAT+P  V+     YL  P  + +  ++      ITQ    + E +K    V  L T  +  +  + +IF ++    + +   +   G+    IH    Q+ R+ V  +F+ G    +V TD+  RGID++ ++ VIN+D P N E Y+HR+GR+GR G  G
Sbjct:  169 AATGSGKTLSYCLPSIVHINAQPLLGPGDGPIVLVLAPTRELAVQIQQECSKFGASSRIRNTCIYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQTLTRDYLNDPIQVTIGSLELAASHTITQIVEVLSEFEKRDRLVKHLETATADKEA-KVLIFSSTKRACDEITSYLRADGWPALAIHGDKQQNERDWVLREFKTGKSPIMVATDVAARGIDVKGISYVINYDMPGNIEDYVHRIGRTGRAGTTG 470          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP2_ASPCL (ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus GN=dbp2 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 6.269e-38
Identity = 94/302 (31.13%), Postives = 160/302 (52.98%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL--MDELTLKGITQYYAFVEERQKVHCLNTLFSKL---QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A+ G+GKT  +C+PA+  I+    +       V++L PTRELA+Q      + GK   I+     GG      I  L + V + + TPGR++D+ + G   L+  + LV+DEAD++L   F+P + ++I  +  +RQ  M+SAT+P  V+     +L     +N+  MD      ITQ    V + +K   +     K+   + N+ +IF  +    + + + + + G+    IH    Q  R+ V ++F+ G    +V TD+ +RGID++ +  V+N+D+P N E Y+HR+GR+GR G  G
Sbjct:  169 AETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMEDRSNKILIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKAGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKG 470          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: RH27_ARATH (DEAD-box ATP-dependent RNA helicase 27 OS=Arabidopsis thaliana GN=RH27 PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 8.188e-38
Identity = 101/296 (34.12%), Postives = 157/296 (53.04%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQ----DNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMD---ELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGR 863
            A+ G+GKT AF IPA+E + +      N   V+++ PTRELA+Q+  V KEL K+ +  V    GG   K +   L + V+LLV TPGR+LD L      I K+   LVMDEAD++L   F+  +++++  LP  RQ  +FSAT    V+D     L  P  I++ +   E+T +G+ Q Y  V    ++  L T   + Q  + I +F ++    +  A+    + + C  I   + Q+ R   F  F       L+CT++  RG+D   V+ ++ +D P NP  Y+HRVGR+ R
Sbjct:  198 ARTGSGKTLAFLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTAR 493          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: PRP5_COCIM (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Coccidioides immitis GN=PRP5 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 8.188e-38
Identity = 101/307 (32.90%), Postives = 158/307 (51.47%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQV-----VILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL---SKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQIN------QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            AK G+GKT AF +P    I     +  +     +I+ PTRELA Q  + CK   K LN++ +   GG  +KD I  L +   ++V TPGR++DL   +   V  L+  + +V+DEAD++    F+P V ++I  +  +RQ ++FSATFP  ++    K L KP  I +    +  + ITQ      E  K   L  L   L  +      +++IF +     + L + +   GY C  IH    Q  R+    DF+ G    L+ T +  RG+D++ + +VIN+D P + E Y+HR GR+GR G+ G
Sbjct:  603 AKTGSGKTIAFLLPMFRHIKDQRPLENMEGPVGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIISNIRPSRQTVLFSATFPRNMEALARKTLTKPVEIIVGGRSVVAQEITQIVEVRPENTKFVRLLELLGNLYSDDNNEDARALIFVDRQEAADGLLRDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGIFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTG 909          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: PRP28_SCLS1 (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=prp28 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 8.188e-38
Identity = 100/328 (30.49%), Postives = 161/328 (49.09%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQ--------DNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPAN-------------------------RQILMFSATFPVTVKDFKDKYLQKPYVINLMD-ELTLKGITQYYAFV--EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A  G+GKTAAF +P L  I +         N+    +IL PTRELA Q     K+    L    +   GG SL++    L     +++ TPGR++D  ++ V +L  C  ++MDEAD+++   F+ SV +++  LP +                         RQ +M++AT P  V+    KYL++P ++ + +    ++ + Q   FV  E+++K      L S       I+F N     + +A+ I  +G++   +H    Q+ R       R+GA   LV TDL  RGID+  V++V+NF+   N E+Y HR+GR+GR G  G
Sbjct:  423 AVTGSGKTAAFLLPLLVYISELPPLNEFTKNDGPYAIILAPTRELAQQIEVEAKKFATPLGFTCVSIVGGHSLEEQSYNLRNGAEIIIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILDALPVSNEKPDTDDAEDAQAMSRHLGGKDRYRQTMMYTATMPPAVEKIAKKYLRRPAIVTIGNIGEAVETVEQRVEFVAGEDKRKKRLNEILASGEFQPPIIVFVNIKRNCDAVARDIKHMGFTSVTLHGSKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSG 750          
The following BLAST results are available for this feature:
BLAST of DY257952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DBP5_BOTFB4.800e-3833.88ATP-dependent RNA helicase dbp5 OS=Botryotinia fuc... [more]
DBP3_CANGA4.800e-3833.55ATP-dependent RNA helicase DBP3 OS=Candida glabrat... [more]
DBP2_AJECN4.800e-3830.69ATP-dependent RNA helicase DBP2 OS=Ajellomyces cap... [more]
YFML_BACSU6.269e-3831.38Putative ATP-dependent RNA helicase yfmL OS=Bacill... [more]
DDX10_CHICK6.269e-3834.23Probable ATP-dependent RNA helicase DDX10 OS=Gallu... [more]
DBP2_PICGU6.269e-3831.35ATP-dependent RNA helicase DBP2 OS=Pichia guillier... [more]
DBP2_ASPCL6.269e-3831.13ATP-dependent RNA helicase dbp2 OS=Aspergillus cla... [more]
RH27_ARATH8.188e-3834.12DEAD-box ATP-dependent RNA helicase 27 OS=Arabidop... [more]
PRP5_COCIM8.188e-3832.90Pre-mRNA-processing ATP-dependent RNA helicase PRP... [more]
PRP28_SCLS18.188e-3830.49Pre-mRNA-splicing ATP-dependent RNA helicase prp28... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2BD07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257952 ID=DY257952; Name=DY257952; organism=Citrus clementina; type=EST; length=1192bp
GAGCTAAGAATGGTACCGGGAAGACAGCTGCCTTCTGCATTCCAGCATTG
GAAAAGATTGACCAAGATAACAATGTGATTCAAGTTGTTATCCTTGTTCC
AACAAGAGAGTTGGCTCTTCAGACATCCCAAGTCTGTAAGGAGCTGGGGA
AGCATTTGAATATTCAAGTCATGGTTACCACTGGTGGAACCAGTCTTAAG
GATGATATTATGCGTTTGTATCAACCTGTTCATTTGCTTGTTGGAACTCC
TGGAAGAATACTAGATCTTTCTAAGAAGGGTGTTTGCATTTTGAAAGATT
GTTCAATGCTTGTTATGGATGAGGCTGATAAGCTTTTGTCACCAGAGTTC
CAACCTTCAGTAGAGCAGCTTATTCGTTTTCTTCCTGCAAATCGTCAAAT
TTTAATGTTTTCAGCTACTTTCCCTGTTACCGTCAAGGACTTTAAAGATA
AGTACCTACAAAAACCATATGTTATTAATCTGATGGATGAGCTTACTCTC
AAGGGAATTACCCAATACTATGCTTTTGTTGAAGAAAGGCAGAAAGTCCA
CTGCCTCAACACACTTTTCTCTAAGTTGCAAATTAATCAATCTATCATTT
TCTGCAATTCGGTGAATCGGGTTGAACTCCTTGCCAAGAAAATTACAGAA
CTTGGGTACTCTTGTTTTTATATCCATGCAAAGATGCTGCAAGACCATCG
CAACAGAGTATTTCATGACTTCCGCAATGGTGCATGCAGGAATCTTGTTT
GTACTGACCTATTTACGAGGGGTATAGACATTCAAGCAGTGAATGTTGTC
ATTAACTTTGATTTTCCTAAGAACCCGGAGACATATCTGCACAGAGTTGG
TCGATCTGGAAGGTTTGGACACCTGGGATAGCTGTGAATTTGATTACTTA
CGAGGACCGCTTCAACTTGTATAGGATTGAGCAAGAACTCGGGACTGAAA
TTAACAAATACCTCCGCATATTGATCAGGCCATTTACTGCCGGTGAATTA
AGGCCGGGAATCTGCTAAAAAAACCAAGGGTGGTAACAAAGGGATTTCCT
GAAGGTGGTTGATTCAAGGGCACTGGGCTCCTGCACCTTAAAGAAACATT
TTTTTGAAACGGGGTTTATTGTGGTTTTGGGGGAAAAAAATTGGCCACCG
GGGGGGCCGGGGGCCAAATAAAACCCCTGGAAATCCCCTTTT
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