DY257952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP5_BOTFB (ATP-dependent RNA helicase dbp5 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp5 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 4.800e-38 Identity = 103/304 (33.88%), Postives = 160/304 (52.63%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVI-QVVILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFV-EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKN--------PETYLHRVGRSGRFGHLG 878 +++GTGKTAAF I L ++D Q + L P+RELA Q V + +G+ ++ + V G ++ + ++VGTPG ++DL K+ +L +DEAD +L + ++ + QIL+FSATFP V F + + I L DELT+ GI Q + E K L L+ + I SIIF + +A+++T+ G+ +H R++V DFR G + L+ T++ RGID+Q+V++VIN+D P PETYLHR+GR+GRFG +G Sbjct: 115 SQSGTGKTAAFVITILSRLDFSKPTTPQALCLAPSRELARQIEGVIRSIGQFVDGLTVQAAIPGAVERNAKVNAM----VVVGTPGTVMDLIKRRSIDASQMKILCLDEADNMLDQQGLGDQCMRVKSMIRVEQILLFSATFPDEVYGFAQDFSPRANEIKLKRDELTVSGIKQMFMDCPNEVGKYEILVKLYGLMTIGSSIIFVKRRDTASNIAERLTKEGHKVAAVHGAFEGSERDQVLEDFRQGKAKVLITTNVLARGIDVQSVSMVINYDVPMKGRSDSDPPPETYLHRIGRTGRFGRVG 414
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP3_CANGA (ATP-dependent RNA helicase DBP3 OS=Candida glabrata GN=DBP3 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 4.800e-38 Identity = 102/304 (33.55%), Postives = 163/304 (53.62%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNV---IQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLI-RFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL--MDELTL-KGITQYYAFVEERQKVHCLNTLFSKLQI-----NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ G+GKT AF +PA+ + ++ I+V+++ PTRELA Q L + + I V GG KDD R +++V TPGR+LDL ++G L +V+DEAD++L F+ ++++I + +RQ LMF+AT+P V++ ++++P +++ DEL+ K ITQ V+ R K L L K Q ++ +IF + + + GY IH + Q R + ++F++G L+ TD+ RG+DI V VIN FP E Y+HR+GR+GR G G Sbjct: 172 AETGSGKTFAFGVPAINNLLTSSSKPKGIKVLVISPTRELASQIYDNLVLLTQKVGIDCCVVYGGVP-KDDQRRQIAKSNVVVATPGRLLDLIEEGSVDLSPVDYMVLDEADRMLEKGFEEDIKRIIGQTKSKDRQTLMFTATWPKEVRELASTFMKEPVKVSIGNRDELSANKRITQIVEVVDPRSKERKLLDLLKKYQSGPKKNDKVLIFALYKKEASRVERNLNYNGYKVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTG 474
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP2_AJECN (ATP-dependent RNA helicase DBP2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DBP2 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 4.800e-38 Identity = 93/303 (30.69%), Postives = 161/303 (53.14%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL--MDELTLKGITQYYAFVEERQK----VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ G+GKT +C+PA+ I+ + V++L PTRELA+Q + GK I+ GG I L + V + + TPGR++D+ + G L+ + LV+DEAD++L F+P + +++ + +RQ M+SAT+P V+ +L +N+ MD ITQ V E +K L+ + + ++ +IF + + + + + + G+ IH Q+ R+ V ++F+ G +V TD+ +RGID++ + V+N+D+P N E Y+HR+GR+GR G G Sbjct: 169 AETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLTRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKDVRQLAQDFLHDYIQVNIGSMDLSANHRITQIVEIVSEFEKRDRMAKHLDRIMEANKHSKVLIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKG 471
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: YFML_BACSU (Putative ATP-dependent RNA helicase yfmL OS=Bacillus subtilis GN=yfmL PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 6.269e-38 Identity = 91/290 (31.38%), Postives = 159/290 (54.83%), Query Frame = 3 Query: 12 GTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKG-ITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 GTGKT A+ +P LE+I + Q VIL P+REL +Q QV ++ ++ GG ++K + +L + H++VGTPGR+ +L K + + +V+DE D+L+ PE + +++Q+I+ +RQ+L FSAT +D + Q+P V+ + G + Y ++R KV L L S+L+ Q+++F + + + A+K+ +H++ + R ++ F +G L+ TD+ RG+DI+ + VI+ D P + + Y+HR GR+GR G G Sbjct: 51 GTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKAKKLKMHEVKTIVLDETDQLVLPEHRETMKQIIKTTLRDRQLLCFSATLKKETEDVLRELAQEPEVLKVQRSKAEAGKVKHQYLICDQRDKVKLLQKL-SRLEGMQALVFVRDIGNLSVYAEKLAYHHVELGVLHSEAKKMERAKIIATFEDGEFPLLLATDIAARGLDIENLPYVIHADIP-DEDGYVHRSGRTGRAGKEG 338
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DDX10_CHICK (Probable ATP-dependent RNA helicase DDX10 OS=Gallus gallus GN=DDX10 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 6.269e-38 Identity = 102/298 (34.23%), Postives = 161/298 (54.03%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQ----DNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDEL---TLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITEL--GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRF 866 AK G+GKT AF +PALE + + + + V+I+ PTRELA QT +V +++GK+ + + GG LK++ R++ +++L+ TPGR+L + + D ML++DEAD++L F ++ +I LP RQ L+FSAT +VKD L+ P + + ++ T + Q Y E + K++ L + +SI+F S V+ L + +L G +H K Q R V+ F L TD+ RG+D AVN VI FD P++ TY+HRVGR+ R+ Sbjct: 117 AKTGSGKTLAFIVPALELLYRLQWTSADGLGVLIISPTRELAFQTFKVLRKVGKNHDFSAGLIIGGKDLKEESERIHH-INMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYIVCELQHKINVLYSFLRSHLKKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRMEVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARY 413
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP2_PICGU (ATP-dependent RNA helicase DBP2 OS=Pichia guilliermondii GN=DBP2 PE=3 SV=3) HSP 1 Score: 158.688 bits (400), Expect = 6.269e-38 Identity = 95/303 (31.35%), Postives = 160/303 (52.81%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQD-----NNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL--MDELTLKGITQYYAFVEERQK----VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A G+GKT ++C+P++ I+ + V++L PTRELA+Q Q C + G I+ GG I L + V + + TPGR++D+ + G L+ + LV+DEAD++L F+P + +++ + +RQ LM+SAT+P V+ YL P + + ++ ITQ + E +K V L T + + + +IF ++ + + + G+ IH Q+ R+ V +F+ G +V TD+ RGID++ ++ VIN+D P N E Y+HR+GR+GR G G Sbjct: 169 AATGSGKTLSYCLPSIVHINAQPLLGPGDGPIVLVLAPTRELAVQIQQECSKFGASSRIRNTCIYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQTLTRDYLNDPIQVTIGSLELAASHTITQIVEVLSEFEKRDRLVKHLETATADKEA-KVLIFSSTKRACDEITSYLRADGWPALAIHGDKQQNERDWVLREFKTGKSPIMVATDVAARGIDVKGISYVINYDMPGNIEDYVHRIGRTGRAGTTG 470
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP2_ASPCL (ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus GN=dbp2 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 6.269e-38 Identity = 94/302 (31.13%), Postives = 160/302 (52.98%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL--MDELTLKGITQYYAFVEERQKVHCLNTLFSKL---QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ G+GKT +C+PA+ I+ + V++L PTRELA+Q + GK I+ GG I L + V + + TPGR++D+ + G L+ + LV+DEAD++L F+P + ++I + +RQ M+SAT+P V+ +L +N+ MD ITQ V + +K + K+ + N+ +IF + + + + + + G+ IH Q R+ V ++F+ G +V TD+ +RGID++ + V+N+D+P N E Y+HR+GR+GR G G Sbjct: 169 AETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMEDRSNKILIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKAGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKG 470
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: RH27_ARATH (DEAD-box ATP-dependent RNA helicase 27 OS=Arabidopsis thaliana GN=RH27 PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 8.188e-38 Identity = 101/296 (34.12%), Postives = 157/296 (53.04%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQ----DNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMD---ELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGR 863 A+ G+GKT AF IPA+E + + N V+++ PTRELA+Q+ V KEL K+ + V GG K + L + V+LLV TPGR+LD L I K+ LVMDEAD++L F+ +++++ LP RQ +FSAT V+D L P I++ + E+T +G+ Q Y V ++ L T + Q + I +F ++ + A+ + + C I + Q+ R F F L+CT++ RG+D V+ ++ +D P NP Y+HRVGR+ R Sbjct: 198 ARTGSGKTLAFLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTAR 493
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: PRP5_COCIM (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Coccidioides immitis GN=PRP5 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 8.188e-38 Identity = 101/307 (32.90%), Postives = 158/307 (51.47%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQV-----VILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL---SKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQIN------QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 AK G+GKT AF +P I + + +I+ PTRELA Q + CK K LN++ + GG +KD I L + ++V TPGR++DL + V L+ + +V+DEAD++ F+P V ++I + +RQ ++FSATFP ++ K L KP I + + + ITQ E K L L L + +++IF + + L + + GY C IH Q R+ DF+ G L+ T + RG+D++ + +VIN+D P + E Y+HR GR+GR G+ G Sbjct: 603 AKTGSGKTIAFLLPMFRHIKDQRPLENMEGPVGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIISNIRPSRQTVLFSATFPRNMEALARKTLTKPVEIIVGGRSVVAQEITQIVEVRPENTKFVRLLELLGNLYSDDNNEDARALIFVDRQEAADGLLRDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGIFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTG 909
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: PRP28_SCLS1 (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=prp28 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 8.188e-38 Identity = 100/328 (30.49%), Postives = 161/328 (49.09%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQ--------DNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPAN-------------------------RQILMFSATFPVTVKDFKDKYLQKPYVINLMD-ELTLKGITQYYAFV--EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A G+GKTAAF +P L I + N+ +IL PTRELA Q K+ L + GG SL++ L +++ TPGR++D ++ V +L C ++MDEAD+++ F+ SV +++ LP + RQ +M++AT P V+ KYL++P ++ + + ++ + Q FV E+++K L S I+F N + +A+ I +G++ +H Q+ R R+GA LV TDL RGID+ V++V+NF+ N E+Y HR+GR+GR G G Sbjct: 423 AVTGSGKTAAFLLPLLVYISELPPLNEFTKNDGPYAIILAPTRELAQQIEVEAKKFATPLGFTCVSIVGGHSLEEQSYNLRNGAEIIIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILDALPVSNEKPDTDDAEDAQAMSRHLGGKDRYRQTMMYTATMPPAVEKIAKKYLRRPAIVTIGNIGEAVETVEQRVEFVAGEDKRKKRLNEILASGEFQPPIIVFVNIKRNCDAVARDIKHMGFTSVTLHGSKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSG 750 The following BLAST results are available for this feature:
BLAST of DY257952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257952 ID=DY257952; Name=DY257952; organism=Citrus clementina; type=EST; length=1192bpback to top |