DY257952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: PRP28_SCHPO (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Schizosaccharomyces pombe GN=prp28 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 8.188e-38 Identity = 104/328 (31.71%), Postives = 163/328 (49.70%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQ-----DNNVI---QVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPAN-------------------RQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKV---------HCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ G+GKTAAF IP + I + ++N+ V+L PTRELA Q + + L + + GG + ++ ++ Q H++V TPGR+LD ++ + +L C+ +VMDEAD++L F+ V +++ LP++ RQ +MFSAT P V + YL +P + LT+ I Q VE+R ++ L S IIF N +E +AK++ +G+ +H Q+ R R RN LV TD+ RGIDI V++V+N++ K+ E Y HR+GR+GR G G Sbjct: 293 AETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKSYLIEPVM------LTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSG 614
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP5_SCLS1 (ATP-dependent RNA helicase dbp5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp5 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 8.188e-38 Identity = 104/304 (34.21%), Postives = 159/304 (52.30%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVI-QVVILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFV-EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP--------KNPETYLHRVGRSGRFGHLG 878 +++GTGKTAAF I L ++D Q + L P+RELA Q V + +G+ + + V G ++ + ++VGTPG ++DL K+ +L +DEAD +L + ++ + QIL+FSATFP V F ++ + I L DELT+ GI Q + E K L L+ + I SIIF + +A+++T G+ IH R+ V DFR G + L+ T++ RGID+Q+V++VIN+D P +PETYLHR+GR+GRFG +G Sbjct: 115 SQSGTGKTAAFVITILSRLDFSKPTTPQALCLAPSRELARQIEGVVRSIGQFVEGLSVQAAIPGAVERNARVNAM----VIVGTPGTVMDLIKRKSIDASQMKVLCLDEADNMLDQQGLGDQCLRVKSMIKVEQILLFSATFPDEVYGFAQQFSPRANEIKLKRDELTVSGIKQMFMDCPNEVGKYEILVKLYGLMTIGSSIIFVKRRDTASHIAERLTAEGHKVAAIHGAFEGAERDTVLEDFRQGKAKVLITTNVLARGIDVQSVSMVINYDIPMKGRSDFEPDPETYLHRIGRTGRFGRVG 414
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP3_PICGU (ATP-dependent RNA helicase DBP3 OS=Pichia guilliermondii GN=DBP3 PE=3 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 8.188e-38 Identity = 102/300 (34.00%), Postives = 155/300 (51.67%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNV-IQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL--MDELTL-KGITQYYAFVEERQKVHCLNTLFSKLQINQSII----FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ G+GKT AF +PA+ I DN ++V+ + PTRELALQ L K+ + + GG KD ++ + ++V TPGR++DL G L LV+DEAD++L F+ ++ +I RQ LMF+AT+P V++ ++ K +++ DEL K ITQ ++ R K L L + +Q I+ + RVE + ++ G++ IH + Q R F+ G L+ TD+ RG+DI V VVIN FP E Y+HR+GR+GR G G Sbjct: 173 AETGSGKTFAFGVPAINNIITDNKKGLRVLCISPTRELALQIYDNLTMLTKNCGLTCVAIYGGVP-KDQQIKAVKTASVVVATPGRLVDLLNDGAVDLSTIDYLVLDEADRMLEKGFEEDIKNIIGCTNKQRQTLMFTATWPKEVRELAATFMNKAVKVSIGNRDELAANKRITQTVEVMDPRDKERRLLQLLRQYGSDQKILVFALYKKEATRVEAMLRRS---GFNVAAIHGDLSQQQRTSALDSFKRGDSNLLLATDVAARGLDIPNVKVVINLTFPLTVEDYVHRIGRTGRAGQTG 468
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP2_DEBHA (ATP-dependent RNA helicase DBP2 OS=Debaryomyces hansenii GN=DBP2 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 8.188e-38 Identity = 95/303 (31.35%), Postives = 158/303 (52.15%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL--MDELTLKGITQYYAFVEERQK----VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A G+GKT ++C+P++ I+ + V++L PTRELA+Q Q C + G I+ GG I L + V + + TPGR++D+ + G L+ + LV+DEAD++L F+P + +++ + +RQ LM+SAT+P V+ YL P + + ++ ITQ V E +K + L T + + + +IF ++ + + + G+ IH Q R+ V +F+ G +V TD+ RGID++ ++ VIN D P N E Y+HR+GR+GR G G Sbjct: 149 ASTGSGKTLSYCLPSIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQALTRDYLNDPIQVTVGSLELAASHTITQLVEVVTEFEKRDRLIKHLETATADPEA-KCLIFASTKRTCDEITNYLRADGWPALAIHGDKQQGERDWVLKEFKTGKSPIMVATDVAARGIDVKGISYVINLDMPGNIEDYVHRIGRTGRAGSTG 450
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP2_CRYNE (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans GN=DBP2 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 8.188e-38 Identity = 98/301 (32.56%), Postives = 160/301 (53.16%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL--MDELTLKGITQYYAFVEERQKVHCLNTLFSKL-QINQSIIFCNSVNRV-ELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ G+GKT +FC+PA+ I+ + V+IL PTRELA+Q + G+ I+ GG I L + V + V TPGR++D+ + G LK + LVMDEAD++L F+P + +++ + +RQ L+FSAT+P V+ +L +N+ +D + Q+ + K L + K+ Q N ++ + RV + L K + G+ IH Q R+ V +F++G ++ TD+ +RG+D++ + VIN+DFP N E Y+HR+GR+GR G G Sbjct: 154 AETGSGKTISFCLPAMVHINAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKG 454
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: PRP5_NEOFI (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=prp5 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.069e-37 Identity = 112/367 (30.52%), Postives = 178/367 (48.50%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQV-----VILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKG---VCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQIN------QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG*L*I*LLTRTASTCIGLSK---NSGLKLTN-TSAY*SGHLLPVN*GRESAKKTKGGNKGI 1046 AK G+GKT AF IP I + + +I+ PTRELA Q + CK K LN++ + GG +KD I L + ++V TPGR++DL V L+ + +V+DEAD++ F+P V +++ + +RQ ++FSATFP ++ K L KP I + + + ITQ E K L + L + +++IF + + L +++ GY C IH Q R+ DF+ G L+ T + RG+D++ + +V+N+D P + E Y+HR GR+GR G+ G L + ++K SG K+ L V G+E A + G KG+ Sbjct: 601 AKTGSGKTIAFLIPMFRHIRDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKSLTKPIEIVVGGKSVVAPEITQIVEVRNEDTKFVRLLEILGNLYSDDANEDARALIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAKALRQSGQKVPEPVQKMVDSFLEKVKAGKEKASASGFGGKGL 967
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: PRP5_ASPFU (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus fumigatus GN=prp5 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.069e-37 Identity = 112/367 (30.52%), Postives = 178/367 (48.50%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQV-----VILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKG---VCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQIN------QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG*L*I*LLTRTASTCIGLSK---NSGLKLTN-TSAY*SGHLLPVN*GRESAKKTKGGNKGI 1046 AK G+GKT AF IP I + + +I+ PTRELA Q + CK K LN++ + GG +KD I L + ++V TPGR++DL V L+ + +V+DEAD++ F+P V +++ + +RQ ++FSATFP ++ K L KP I + + + ITQ E K L + L + +++IF + + L +++ GY C IH Q R+ DF+ G L+ T + RG+D++ + +V+N+D P + E Y+HR GR+GR G+ G L + ++K SG K+ L V G+E A + G KG+ Sbjct: 619 AKTGSGKTIAFLIPMFRHIRDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKSLTKPIEIVVGGKSVVAPEITQIVEVRNEDTKFVRLLEILGNLYSDDANEDARALIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAKALRQSGQKVPEPVQKMVDSFLEKVKAGKEKASASGFGGKGL 985
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP8_COCIM (ATP-dependent RNA helicase DBP8 OS=Coccidioides immitis GN=DBP8 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.069e-37 Identity = 106/311 (34.08%), Postives = 160/311 (51.45%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKG----VCILKDCSMLVMDEADKLLSP---EFQPSVEQLIRFLP--ANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGIT-------QYYAFVEERQKVHCLNTLFSKLQINQS---IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 ++ G+GKT AF P L + +D I V+L PTRELALQ + K + +++ ++ TGG+ ++ + L H+++ TPGR+ D K + L M+V+DEAD+LL+ P VE + LP +RQ L+F+AT V+ K K + + E++ + T Q Y V + L+ L S N S IIFCN +LL + + LG+ +H+ + Q R FR A R LV TD+ RG+DI +V +V+NFD P+NP+ Y+HRVGR+ R G G Sbjct: 150 SRTGSGKTVAFAAPILHRWSEDPFGIFAVVLTPTRELALQIFEQFKAISAPQSLKPVLITGGSEMRPQAIALSTRPHVVIATPGRLADHIKTSGQDTIYGLNRVRMVVLDEADRLLASGPGSMLPDVETCLSALPPSTSRQTLLFTATVTQEVRALKSMPRPKDRLPIFVTEISTENNTTIPPTLKQCYLQVPMTHREAFLHVLLST-DANSSKPAIIFCNRTKTADLLDRLLRRLGHRVTSLHSLLPQSERTSNLARFRASAARLLVATDVAARGLDIPSVGLVVNFDVPRNPDDYIHRVGRTARAGREG 459
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP3_SCLS1 (ATP-dependent RNA helicase dbp3 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp3 PE=3 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 1.069e-37 Identity = 101/309 (32.69%), Postives = 158/309 (51.13%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKI-----DQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPA--NRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELT-----LKGITQYYAFVEERQKVHCLNTLFSKLQINQS-----IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ G+GKT AF +P + + +Q N + V++ PTRELA+Q+ + +L K ++ + GG KD+ +R + ++V TPGR+ DL +G L +V+DEAD++L F+ + ++I P+ RQ LMF+AT+P +V++ ++ P I + D T I Q VE R K + L L + Q ++FC + I + G+ IH + Q+ R R F++G LV TD+ RG+DI AV +VIN FP E Y+HR+GR+GR G G Sbjct: 223 AETGSGKTMAFAVPCVRYMSSLPKNQKNKGPRAVVVSPTRELAMQSYEQIVKLAKASGLECVCVYGGVP-KDEQIRALKTADIVVATPGRLNDLINQGCADLSKARYVVLDEADRMLDKGFEEEIRKIINTTPSLGKRQTLMFTATWPESVRELASTFMTSPVKIAIGDNPTGDLRANSRIVQKVEVVEPRDKEYRLMQLLKQYQSGSQKDDRILVFCLYKKEATRVEGFIRQKGFRVAGIHGDLSQEQRTRSLEAFKSGNTPVLVATDVAARGLDIPAVKLVINCTFPLTVEDYVHRIGRTGRAGKDG 530
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP3_SCHPO (ATP-dependent RNA helicase dbp3 OS=Schizosaccharomyces pombe GN=dbp3 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.069e-37 Identity = 108/307 (35.18%), Postives = 166/307 (54.07%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKID---QDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLP-----ANRQILMFSATFPVTVKDFKDKYLQKPYVINL-MDELTL-KGITQYYAFVEE-RQKVHCLNTLFSKL--------QINQSIIFCNSVNRVE-LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGR 863 A+ G+GKT AF IPAL+ ++ + +V +V+++ PTRELA+QT + L + N++ +V GG K + R + +++GTPGR+LDL G LV+DEAD++L F+ + +I P +RQ + FSAT+P +V+ +L+ P I + DEL + ITQ +++ R K L+ L K +I +++ RVE LA+K +G IH M Q R + +DF++G C LV TD+ RG+DI V +VIN FP E Y+HR+GR+GR Sbjct: 209 AETGSGKTVAFGIPALQYLNGLSDNKSVPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAP-KSEQARAAKNASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLDNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLARKYNVVG-----IHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGR 509 The following BLAST results are available for this feature:
BLAST of DY257952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257952 ID=DY257952; Name=DY257952; organism=Citrus clementina; type=EST; length=1192bpback to top |