DY257952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: RRP3_PICST (ATP-dependent rRNA helicase RRP3 OS=Pichia stipitis GN=RRP3 PE=3 SV=3) HSP 1 Score: 157.532 bits (397), Expect = 1.397e-37 Identity = 96/298 (32.21%), Postives = 151/298 (50.67%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD-LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDEL-TLKGITQYYAFVEERQK----VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ G+GKTAAF IP L+ + + ++L P RELA Q + LG + ++ + GG + D L + H+++ TPGRI+D L LK VMDEADKLL EF P ++++++ +P+ R +FSAT ++ + L P + + + T + Q V + K +H LN K IIF + + + LG+S +H + Q R + F++G L+ TD+ RG+DI +V+VVIN+D P + + Y+HRVGR+ R G G Sbjct: 115 AQTGSGKTAAFAIPILQSLWEAQTPYFGLVLAPARELAYQIKETFDALGSTMGVRTVCLVGGMDMMDQARDLMRKPHIIIATPGRIMDHLEHTKGFSLKMLKYFVMDEADKLLDLEFGPVLDKILKQIPSKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLIQSMMLVSDGYKNTYLIHLLNEFVGK----SIIIFARTRAHTQRTSILCRILGFSAVPLHGDLTQAQRLGSLNKFKSGTANILIATDVAARGLDIPSVDVVINYDIPTDSKAYVHRVGRTARAGRSG 408
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: PRP5_CRYNE (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus neoformans GN=PRP5 PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.397e-37 Identity = 97/314 (30.89%), Postives = 167/314 (53.18%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQ-----VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDL---SKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKL--------------QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 AK G+GKT AF +P L + V V++ PTRELA Q + C+ K LNI+ GG+S+ +DI + + +++ TPGR++DL + V ++ + +VMDEAD++ F+P V ++I + + Q ++FSATFP T++ + L KP E+T+ G + +++R +V +T F++L +++IF + + L +++ + GY C +H Q R+ +F+NG +V T + RG+D++ + +VIN+D P + E Y+HR GR+GR G+ G Sbjct: 447 AKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTTYIVMDEADRMFDMGFEPQVMKIINNVRPSAQKVLFSATFPKTMESLARRILVKPL------EITVGGRSVVAPEIDQRVEVRDGDTKFTRLLEILGEMGEEHKDEDDFRTLIFVDRQESADDLFRELLQRGYVCASLHGGKEQVDRDEAIKNFKNGDVPIIVATSVAARGLDVKELKLVINYDAPNHMEDYVHRAGRTGRAGNKG 754
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: PRP28_YARLI (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Yarrowia lipolytica GN=PRP28 PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.397e-37 Identity = 97/323 (30.03%), Postives = 165/323 (51.08%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPA------LEKIDQDNNVIQV--VILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPAN--------------------RQILMFSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFV--EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ G+GKTA+F IP L K+D+ + V +IL PTRELA+Q + L +V+ GG S ++ + + + L+V TPGR+LD+ + + +L C +VMDEAD+++ F+ V++++ LP++ RQ +M++AT PV ++ KYL++P ++ + +TQ F+ +E++K L+ + + ++F N E ++ + G+ IH Q+ R + + GA LV TD+ RG+DI V++V+NF N E+Y HR+GR+GR G G Sbjct: 207 AETGSGKTASFLIPLISYICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAVKFCAPLGFKVVSVVGGYSAQEQALAVQEGAELIVATPGRLLDVIDRRLLVLNQCCYVVMDEADRMVDMGFEEQVQKVLASLPSSNAKPDSDEAENLAAVSTRRYRQTMMYTATMPVAIEKLAKKYLRRPGIVTIGSAGQAGSTVTQLVEFLNTDEKRKRRLLDIISKRQYRPPIVVFLNYKRDCEAVSDALVAAGWRTAIIHGGKQQEQREQAVQHLKRGAVDVLVATDVAGRGLDIPNVSLVVNFQMANNIESYTHRIGRTGRAGKRG 529
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: RH51_ORYSJ (Putative DEAD-box ATP-dependent RNA helicase 51 OS=Oryza sativa subsp. japonica GN=Os06g0535100 PE=3 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 1.824e-37 Identity = 97/305 (31.80%), Postives = 165/305 (54.10%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQ----DNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDC-SMLVMDEADKLLSPEFQPSVEQLIRFLPAN-RQILMFSATFPVTVKDF-------KDKYLQKPYVINLMD---ELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS--IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGR 863 AK G+GKT AF IPA+E + + N V++L PTRELA+QT V KEL ++ + + GG L+ + +L + +++LV TPGR+LD +K +C L++DEAD++L F+ ++Q+ + LP RQ ++FSAT V+DF K++ + + + D + T++G+ Q Y + ++ L K ++ ++F +S N V+ A+ + + C+ IH ++ Q R F F L+CT++ RG+DI V+ ++ +D P + Y+HRVGR+ R Sbjct: 130 AKTGSGKTLAFLIPAIELLCRLRFSPRNGTGVIVLCPTRELAIQTHNVAKELMRYHSQTLGYVIGGIDLRGEAEQLAKGINVLVATPGRLLDHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGRQTVLFSATQTEKVEDFAKLTFGSKEERQRTLVYVGVDDHESKATVEGLKQGYCVIPSERRFLVLYAFLKKALSEKTKVMVFFSSCNSVKFHAQLLNFIQIECYDIHGQLKQHQRTSTFFKFHKAEHGILLCTNVAARGLDIPDVDYIVQYDPPDETKDYIHRVGRTAR 434
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: PRP5_ASPCL (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus clavatus GN=prp5 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.824e-37 Identity = 100/307 (32.57%), Postives = 156/307 (50.81%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQV-----VILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKG---VCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQIN------QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 AK G+GKT AF IP I + + +I+ PTRELA Q + CK K LN++ + GG +KD I L + ++V TPGR++DL V L+ + +V+DEAD++ F+P V +++ + +RQ ++FSATFP ++ K L KP I + + ITQ E K L + L + +S+IF + L +++ GY C IH Q R+ DF+ G L+ T + RG+D++ + +V+N+D P + E Y+HR GR+GR G+ G Sbjct: 601 AKTGSGKTVAFLIPMFRHIKDQRPLDNMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKALTKPIEIIVGGRSVVAPEITQIVEVRNEDTKFVRLLEILGNLYSDDANEDARSLIFVERQEAADALLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTG 907
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DRS1_DEBHA (ATP-dependent RNA helicase DRS1 OS=Debaryomyces hansenii GN=DRS1 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.824e-37 Identity = 101/305 (33.11%), Postives = 160/305 (52.46%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVI---QVVILVPTRELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDC-SMLVMDEADKLLSPEFQPSVEQLIRFLPAN-RQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKL-------QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A G+GKTAA+ IP +E++ I +V++L PTRELA+Q V K++G+ +N + + GG +L+ +L +++ TPGR++D + D +LV+DEAD++L FQ + +++ +P + RQ L++SAT ++D LQKP + ++D I FV R++ H L +L Q N+ ++F L + LG +H + Q+ R +DF+N L+CTDL RG+DI + +VIN+D PK E YLHRVGR+ R G G Sbjct: 302 AVTGSGKTAAYMIPIIERLLYKPAKISSTRVIVLAPTRELAIQVCDVGKKIGQFVNNLNFGLAVGGLNLRQQEQQLKTRPDIVIATPGRLIDHIRNSPSFSIDSLEVLVIDEADRMLDEGFQAELTEILSLIPRHKRQTLLYSATMNTKIQDLIQLSLQKPVRV-MIDPPKSAAIKLVQEFVRIRKRDHLKPALLFQLIKSVDPSQQNRIVVFVARKESAHKLRIILGLLGMRVSELHGSLTQEQRLASVNDFKNLTVPVLICTDLAARGLDIPKIEIVINYDMPKTHEIYLHRVGRTARAGREG 605
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DDX54_HUMAN (ATP-dependent RNA helicase DDX54 OS=Homo sapiens GN=DDX54 PE=1 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 1.824e-37 Identity = 94/297 (31.65%), Postives = 159/297 (53.54%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDN--NVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKG--ITQYYAFVEERQKVHCLNTLFSKLQ-INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ G+GKTA F +P E++ + + +IL PTRELALQT + KELGK ++ + GG ++D L++ +++ TPGR++ ++ + L+ +V DEAD+L F ++++I LP Q ++FSAT P + +F L +P +I L + L T ++ E+ + L+ L + ++ +Q+++F + + E L + +T SC +I++ + R F G C L+ TDL RG+DI ++ VIN+ FP + +LHRVGR R G G Sbjct: 140 ARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFLVREDTKAAVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSG 436
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DDX27_DICDI (Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium discoideum GN=ddx27 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.824e-37 Identity = 105/301 (34.88%), Postives = 160/301 (53.16%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKI---DQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD--LSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEER-----QKVHCLNTLFSKLQINQ--SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFG 869 A G+GKTAAF +P LE++ D + I+V+IL+PTRELALQ V + L + NI + GG S K + L + +++ TPGR++D L+ G+ L D +L++DEAD+LL F+ + +++ P NRQ ++FSAT VK LQ+P + + D L T FV+ + + L +L +++ NQ +IIFC S V L +H + Q+ R FR+G L+ +D+ +RG+DI V VIN++ P N Y+HRVGR+ R G Sbjct: 234 ASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNAHGIG-LDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQTMLFSATLNDEVKTLAKLSLQQPIRVQV-DALMQVTSTLEQEFVKIKPQHLSDRPAILLSLCTRV-FNQGGTIIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFDSLQQFRDGQVNYLLASDVASRGLDIIGVKTVINYNMPNNMANYIHRVGRTARAG 531
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBP5_ASPCL (ATP-dependent RNA helicase dbp5 OS=Aspergillus clavatus GN=dbp5 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.824e-37 Identity = 104/312 (33.33%), Postives = 167/312 (53.53%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKID----QDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIR---FLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLM-DELTLKGITQYYAFV-EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK-----------NPETYLHRVGRSGRFGHLG 878 +++GTGKTAAF + AL ++D Q Q +IL PTRELA Q V +G+ L+ ++ T + + RL + VGTPG ++D+ K+ + + +LV+DEAD +L Q +Q IR LP + Q+++FSATFP V + K+ + L +ELT++GI Q Y +E K L L+ L + SIIF + + K++ G++ + + R+ + FR+G + L+ T++ RGID+ V++VIN+D P+ + +TYLHR+GR+GRFG +G Sbjct: 123 SQSGTGKTAAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQIVGVVSVMGQFLDGLIIGTAVPADINNRPKRL--ECSIAVGTPGTVMDMIKRRIMVPNKLKVLVLDEADNMLDQ--QGLGDQCIRVKALLPRDIQVVLFSATFPDHVHAYAAKFAPNANELTLQHEELTVEGIKQLYLDCSDEEDKYKTLVQLYGLLTVGSSIIFVQTRTSASEIEKRMVAEGHTVASLTGGIDVTKRDEIIDKFRSGEAKVLITTNVLARGIDVSTVSMVINYDIPELHRPGVPERQADFQTYLHRIGRTGRFGRVG 430
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: RHLB_PSESM (ATP-dependent RNA helicase rhlB OS=Pseudomonas syringae pv. tomato GN=rhlB PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 2.382e-37 Identity = 97/300 (32.33%), Postives = 155/300 (51.67%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQ-------VVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLY-QPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLP--ANRQILMFSATFPVTVKDFKDKYLQKPYVINLMD-ELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFG 869 A+ GTGKTAAF I +E++ Q + +I+ PTREL +Q ++ +L K+ N+ VM GG + +L + +LV TPGR+LD +++G L ++V+DEAD++L F P V Q+IR P RQ L+FSATF V + ++ P ++ + + + Q+ V K L L + + ++F N + V + +++ G + + + Q R + FR G R LV TD+ RGI I ++ VINF P+ P+ Y+HR+GR+GR G Sbjct: 52 AQTGTGKTAAFLISIIEQLTQTPPPAERYMGEPRALIIAPTRELVVQIAKDAADLTKYTNLNVMTFVGGMDFDKQLKQLEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHKGERQTLLFSATFTEDVMNLAKQWTTDPSIVEIESLNVASDNVEQHIYAVAGADKYKLLYNLVTDNGWERVMVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAG 351 The following BLAST results are available for this feature:
BLAST of DY257952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257952 ID=DY257952; Name=DY257952; organism=Citrus clementina; type=EST; length=1192bpback to top |