DY257952

Overview
NameDY257952
Unique NameDY257952
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1192
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_CAEEL (Eukaryotic initiation factor 4A OS=Caenorhabditis elegans GN=inf-1 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 5.093e-64
Identity = 117/294 (39.80%), Postives = 194/294 (65.99%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKTA F +  L++ID ++  +Q +++ PTRELA Q  +V   LG++LN+ ++   GGTS++DD  +L   +H++VGTPGR+ D+  +         M V+DEAD++LS  F+  + ++ R +P + Q+++ SAT P  V D  +++++ P  ++   DELTL+GI Q+Y  V++ + K  CL  L++ + + Q++IFCN+  +V+ L +K+TE  ++   +H  M Q  R+ +  +FR+G+ R L+ TD+  RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G
Sbjct:   73 AQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKG 366          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: FAL1_SCHPO (ATP-dependent RNA helicase fal1 OS=Schizosaccharomyces pombe GN=tif412 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 8.984e-64
Identity = 125/294 (42.52%), Postives = 184/294 (62.59%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKTA F I  L+ ID      Q +IL PTRELA+Q   V   LG H+N+Q     GGTS+ +DI +L    H++ GTPGR+ D+ ++     ++  ML++DEAD+LL+  F+  +  + R+LP   Q+++ SAT P  V +  +K+   P  ++   DELTL+G+ QY+  VE E  K   L  L+  L I Q++IFCNS  +V+ L +K+ E  ++   +H +M Q  R+ +  DFR G  R L+CTD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G
Sbjct:   65 AQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPPGTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKG 358          

HSP 2 Score: 23.8682 bits (50), Expect = 8.984e-64
Identity = 12/28 (42.86%), Postives = 17/28 (60.71%), Query Frame = 2
Query:  875 GIAVNLITYEDRFNLYRIEQELGTEINK 958
            G+A+N +T ED   L  IEQ   T I++
Sbjct:  358 GVAINFVTNEDVRILRDIEQYYSTVIDE 385          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: FAL1_YARLI (ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica GN=FAL1 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 2.597e-63
Identity = 124/294 (42.18%), Postives = 186/294 (63.27%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKTA F I  LE ID  +   Q ++L PTRELA Q   V   LG ++N+Q     GGTSL  D+ +L     ++ GTPGR LD+ KKG    K+  ML++DEAD+LL+  FQ  +  + R+LPA  Q+++ SAT P +V +   K++  P  ++   DELTL+G+ QY+  VE+ + K   L  L+  L I Q++IFCN+  +V+ L +++ +  ++   +H  M Q  R+ + ++FR+G  R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G
Sbjct:   68 AQSGTGKTATFSISMLEVIDTKHRETQAMVLSPTRELATQIQSVILALGDYMNVQCHACIGGTSLSVDMKKLEAGQQVVSGTPGRCLDMIKKGCLRTKNLKMLILDEADELLNKGFQEQIYDIYRYLPAATQVVVVSATLPHSVLEMTSKFMTDPVRILVKRDELTLEGLKQYFIAVEQEEWKFDTLCDLYDTLTITQAVIFCNTKKKVDWLTQQMKDNNFTVCSMHGDMAQKDRDSIMNEFRSGRSRVLISTDVWARGIDVQQVSLVINYDLPPNRENYIHRIGRSGRFGRKG 361          

HSP 2 Score: 24.2534 bits (51), Expect = 2.597e-63
Identity = 11/28 (39.29%), Postives = 17/28 (60.71%), Query Frame = 2
Query:  875 GIAVNLITYEDRFNLYRIEQELGTEINK 958
            G+A+N  T +D   L  IEQ   T+I++
Sbjct:  361 GVAINFATNDDITTLRDIEQYYSTQIDE 388          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_LEIBR (Probable eukaryotic initiation factor 4A OS=Leishmania braziliensis GN=LbrM01_V2.0740 PE=3 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 4.311e-63
Identity = 127/296 (42.91%), Postives = 191/296 (64.53%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVT---TGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKT AF I  L+++D  +N+IQ ++L PTRELALQT++V   +G+ L+          GGT ++DD+ +L   V + VGTPGR+ D+ K+G    +   +LV+DEAD++LS  F   + ++ RFLP + Q+ +FSAT P  V +   K+++ P  I +  E LTL+GI Q++  VEE  K+  L  L+  + I QS+IF N+  +V+ +A+K+ +  ++   +HA+M +  R RV + FR+G+ R LV TDL  RGID+  VN+VINFD P N E YLHR+GR GR+G  G
Sbjct:   70 AQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSAKFCETFVGGTRVQDDLRKLQAGVVVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLPKDIQVALFSATMPEEVLELTKKFMRDPVRILVKRESLTLEGIKQFFIAVEEEHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKG 365          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_LEIMA (Probable eukaryotic initiation factor 4A OS=Leishmania major GN=LMJ_0078 PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 5.631e-63
Identity = 129/296 (43.58%), Postives = 192/296 (64.86%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTT--GGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKT AF I  L+++D  +N+IQ ++L PTRELALQT++V   +G+ L N      T  GGT ++DD+ +L   V + VGTPGR+ D+ K+G    +   +LV+DEAD++LS  F   + ++ RFLP + Q+ +FSAT P  V +   K+++ P  I +  E LTL+GI Q++  VEE  K+  L  L+  + I QS+IF N+  +V+ +A+K+ +  ++   +HA+M +  R RV + FR+G+ R LV TDL  RGID+  VN+VINFD P N E YLHR+GR GR+G  G
Sbjct:   70 AQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGTRVQDDLRKLQAGVIVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLPKDIQVALFSATMPEEVLELTKKFMRDPVRILVKRESLTLEGIKQFFIAVEEEHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKG 365          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_LEIIN (Probable eukaryotic initiation factor 4A OS=Leishmania infantum GN=LinJ01.0780 PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 5.631e-63
Identity = 129/296 (43.58%), Postives = 192/296 (64.86%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTT--GGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKT AF I  L+++D  +N+IQ ++L PTRELALQT++V   +G+ L N      T  GGT ++DD+ +L   V + VGTPGR+ D+ K+G    +   +LV+DEAD++LS  F   + ++ RFLP + Q+ +FSAT P  V +   K+++ P  I +  E LTL+GI Q++  VEE  K+  L  L+  + I QS+IF N+  +V+ +A+K+ +  ++   +HA+M +  R RV + FR+G+ R LV TDL  RGID+  VN+VINFD P N E YLHR+GR GR+G  G
Sbjct:   70 AQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGTRVQDDLRKLQAGVIVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLPKDIQVALFSATMPEEVLELTKKFMRDPVRILVKRESLTLEGIKQFFIAVEEEHKLDTLMDLYETVSIAQSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKG 365          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_ASHGO (ATP-dependent RNA helicase eIF4A OS=Ashbya gossypii GN=TIF1 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.664e-62
Identity = 120/294 (40.82%), Postives = 182/294 (61.90%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKT  F I AL++ID+     Q +IL PTRELALQ  +V   L  H++++V    GGT  ++D   L     ++VGTPGR+ D+ ++         M ++DEAD++LS  F+  + ++   LP   Q+++ SAT P  V D  DK++ KP  ++   D LTL+GI QYY  VE E  K  CL+ L+  + + Q++IFCN+  +VE L K++T+  ++   I++ + Q  R+ +  +FR G+ R L+ TDL  RGID+Q V++VIN+D P N E Y+HR+GR GRFG  G
Sbjct:   66 AQSGTGKTGTFSIAALQRIDESIKAPQALILAPTRELALQIQKVVMALALHMDVKVHACIGGTDPREDAEALRAGAQIVVGTPGRVFDMIERRNFKTDHIKMFILDEADEMLSSGFKEQIYKIFTMLPPTTQVVLLSATMPKEVLDVTDKFMNKPVRILVKKDALTLEGIQQYYINVESEEYKYDCLSDLYDSISVTQAVIFCNTRRKVEELTKRLTDDSFTVSAIYSDLPQAQRDTIMKEFRTGSSRILISTDLLARGIDVQQVSLVINYDLPNNKENYIHRIGRGGRFGRKG 359          

HSP 2 Score: 23.0978 bits (48), Expect = 1.664e-62
Identity = 9/28 (32.14%), Postives = 18/28 (64.29%), Query Frame = 2
Query:  875 GIAVNLITYEDRFNLYRIEQELGTEINK 958
            G+A+NL+T  D  ++  +E+   T+I +
Sbjct:  359 GVAINLVTDRDVGDMRELERFYSTQIEE 386          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_KLULA (ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis GN=TIF1 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 3.650e-62
Identity = 120/294 (40.82%), Postives = 183/294 (62.24%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKT  F I AL+ ID+     Q +IL PTRELALQ  +V   L  H++++V    GGTSL++D   L     ++VGTPGR+ D+  + +    +  M ++DEAD++LS  F+  +  +   LP   Q+++ SAT P  V +   K+++ P  ++   DELTL+GI QYY  VEE Q K  CL  L+  + + Q++IFCN+  +VE L +++ E  ++   I++ + Q  R+ +  +FR+G+ R L+ TDL  RGID+Q V++VIN+D P N E Y+HR+GR GRFG  G
Sbjct:   66 AQSGTGKTGTFSIAALQNIDEKIKAPQGLILAPTRELALQIQKVVMALAIHMDVKVHACIGGTSLQEDSEALRGGAQIIVGTPGRVFDMIDRRIFKTDNIKMFILDEADEMLSTGFKEQIYNIFTMLPPTSQVVLLSATMPGDVLEVTSKFMKDPVRILVKKDELTLEGIGQYYVNVEEEQYKYDCLTDLYDSISVTQAVIFCNTRRKVEELTERLRENNFTVSAIYSDLQQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKG 359          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_TRYCR (Probable eukaryotic initiation factor 4A OS=Trypanosoma cruzi GN=Tc00.1047053511585.190 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 6.226e-62
Identity = 127/297 (42.76%), Postives = 191/297 (64.31%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL---NIQVMVT-TGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKT AF I  L+++D  +NV+Q ++L PTRELALQT++V   +G+ L   N     T  GGT ++DD  +L     + VGTPGR++D++K+G    +   +LV+DEAD++LS  F   + ++ R+LP   Q+ +FSAT P  V +   K+++ P  I +  E LTL+GI QY+  VEE  K+  L  L+  + I QS+IF N+  +V+ LA+++ +  ++   +H++M +  R +V   FRNG+ R LV TDL  RGID+  VN+VINFD P N E+YLHR+GR GR+G  G
Sbjct:   70 AQSGTGKTGAFSIGLLQRLDFRHNVLQGLVLSPTRELALQTAEVITRIGEFLAEGNSSFCATFVGGTRVQDDYRKLQAGSIVAVGTPGRVVDVTKRGAMRTEHLRVLVLDEADEMLSQGFAEQIYEIFRYLPKEIQVALFSATMPDDVLELTKKFMRDPTRILVKRESLTLEGIKQYFIAVEEEHKLDTLMDLYETVSIAQSVIFANTRRKVDWLAQQLNQSNHTVSCMHSEMPKQDREKVMSTFRNGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKESYLHRIGRGGRYGRKG 366          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: FAL1_USTMA (ATP-dependent RNA helicase FAL1 OS=Ustilago maydis GN=FAL1 PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.813e-61
Identity = 121/294 (41.16%), Postives = 183/294 (62.24%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKTA F I  L+ ID      Q ++L PTRELA+Q   V   LG +LN+Q     GGTS+ +DI +L    H++ GTPGR+ D+ ++     K+  ML++DE+D+LL+  F+  +  + R+LP + Q+++ SAT P  V +   K++  P  ++   DELTL+GI Q++  VE E  K   L  L+  L I Q++IFCN+  +V+ L+ K+ E  +    +H +M Q  R+ V  +FR G+ R L+ TD++ RGIDI  +++VIN+D P N E Y+HR+GRSGRFG  G
Sbjct:   68 AQSGTGKTATFSISMLQSIDTTLRETQALVLSPTRELAIQIQSVVLALGDYLNVQCHACIGGTSVGEDIRKLDYGQHIVSGTPGRVYDMIRRRHLRTKNIKMLILDESDELLNMGFKDQIYDVYRYLPPSTQVVLLSATLPQDVLEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLSAKMKENNFQVSSMHGEMQQKERDEVMAEFRQGSSRVLITTDVWARGIDIANISLVINYDLPTNRENYIHRIGRSGRFGRKG 361          

HSP 2 Score: 25.409 bits (54), Expect = 1.813e-61
Identity = 11/28 (39.29%), Postives = 18/28 (64.29%), Query Frame = 2
Query:  875 GIAVNLITYEDRFNLYRIEQELGTEINK 958
            G+A+N +T +D   L  IEQ   T+I++
Sbjct:  361 GVAINFVTVDDVRTLRDIEQFYSTQIDE 388          
The following BLAST results are available for this feature:
BLAST of DY257952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IF4A_CAEEL5.093e-6439.80Eukaryotic initiation factor 4A OS=Caenorhabditis ... [more]
FAL1_SCHPO8.984e-6442.52ATP-dependent RNA helicase fal1 OS=Schizosaccharom... [more]
FAL1_YARLI2.597e-6342.18ATP-dependent RNA helicase FAL1 OS=Yarrowia lipoly... [more]
IF4A_LEIBR4.311e-6342.91Probable eukaryotic initiation factor 4A OS=Leishm... [more]
IF4A_LEIMA5.631e-6343.58Probable eukaryotic initiation factor 4A OS=Leishm... [more]
IF4A_LEIIN5.631e-6343.58Probable eukaryotic initiation factor 4A OS=Leishm... [more]
IF4A_ASHGO1.664e-6240.82ATP-dependent RNA helicase eIF4A OS=Ashbya gossypi... [more]
IF4A_KLULA3.650e-6240.82ATP-dependent RNA helicase eIF4A OS=Kluyveromyces ... [more]
IF4A_TRYCR6.226e-6242.76Probable eukaryotic initiation factor 4A OS=Trypan... [more]
FAL1_USTMA1.813e-6141.16ATP-dependent RNA helicase FAL1 OS=Ustilago maydis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAB2BD07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257952 ID=DY257952; Name=DY257952; organism=Citrus clementina; type=EST; length=1192bp
GAGCTAAGAATGGTACCGGGAAGACAGCTGCCTTCTGCATTCCAGCATTG
GAAAAGATTGACCAAGATAACAATGTGATTCAAGTTGTTATCCTTGTTCC
AACAAGAGAGTTGGCTCTTCAGACATCCCAAGTCTGTAAGGAGCTGGGGA
AGCATTTGAATATTCAAGTCATGGTTACCACTGGTGGAACCAGTCTTAAG
GATGATATTATGCGTTTGTATCAACCTGTTCATTTGCTTGTTGGAACTCC
TGGAAGAATACTAGATCTTTCTAAGAAGGGTGTTTGCATTTTGAAAGATT
GTTCAATGCTTGTTATGGATGAGGCTGATAAGCTTTTGTCACCAGAGTTC
CAACCTTCAGTAGAGCAGCTTATTCGTTTTCTTCCTGCAAATCGTCAAAT
TTTAATGTTTTCAGCTACTTTCCCTGTTACCGTCAAGGACTTTAAAGATA
AGTACCTACAAAAACCATATGTTATTAATCTGATGGATGAGCTTACTCTC
AAGGGAATTACCCAATACTATGCTTTTGTTGAAGAAAGGCAGAAAGTCCA
CTGCCTCAACACACTTTTCTCTAAGTTGCAAATTAATCAATCTATCATTT
TCTGCAATTCGGTGAATCGGGTTGAACTCCTTGCCAAGAAAATTACAGAA
CTTGGGTACTCTTGTTTTTATATCCATGCAAAGATGCTGCAAGACCATCG
CAACAGAGTATTTCATGACTTCCGCAATGGTGCATGCAGGAATCTTGTTT
GTACTGACCTATTTACGAGGGGTATAGACATTCAAGCAGTGAATGTTGTC
ATTAACTTTGATTTTCCTAAGAACCCGGAGACATATCTGCACAGAGTTGG
TCGATCTGGAAGGTTTGGACACCTGGGATAGCTGTGAATTTGATTACTTA
CGAGGACCGCTTCAACTTGTATAGGATTGAGCAAGAACTCGGGACTGAAA
TTAACAAATACCTCCGCATATTGATCAGGCCATTTACTGCCGGTGAATTA
AGGCCGGGAATCTGCTAAAAAAACCAAGGGTGGTAACAAAGGGATTTCCT
GAAGGTGGTTGATTCAAGGGCACTGGGCTCCTGCACCTTAAAGAAACATT
TTTTTGAAACGGGGTTTATTGTGGTTTTGGGGGAAAAAAATTGGCCACCG
GGGGGGCCGGGGGCCAAATAAAACCCCTGGAAATCCCCTTTT
back to top