DY257952

Overview
NameDY257952
Unique NameDY257952
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1192
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_VANPO (ATP-dependent RNA helicase eIF4A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF1 PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 2.003e-60
Identity = 121/294 (41.16%), Postives = 184/294 (62.59%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVEERQ-KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKT  F I AL++ID      Q +IL PTRELALQ  +V   L  H++++V    GGTS  +D   L +   ++VGTPGR+ D  ++      +  M ++DEAD++LS  F+  + Q+   LP   Q+++ SAT P  V +   K+++ P  ++   DELTL+GI Q+Y  VEE Q K  CL+ L+  + + Q++IFCN+  +VE L +K+TE  ++   I++ + Q  R+ +  +FR+G+ R L+ TDL  RGID+Q V++VIN+D P N E Y+HR+GR GRFG  G
Sbjct:   67 AQSGTGKTGTFSIAALQRIDSSIKAPQALILAPTRELALQIQKVVIALAFHMDVKVHACIGGTSFVEDTEGL-KDAQIVVGTPGRVSDNIQRHRFKTDNIKMFILDEADEMLSSGFREQIYQIFTMLPPTTQVVLLSATLPGDVLEVTTKFMRNPIRILVKKDELTLEGIKQFYINVEEEQYKFDCLSDLYDSISVTQAVIFCNTRRKVEELTQKLTESNFTVSSIYSDLPQQERDVIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKG 359          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: FAL1_NEOFI (ATP-dependent RNA helicase fal1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=fal1 PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 2.003e-60
Identity = 124/294 (42.18%), Postives = 180/294 (61.22%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKTA F I  L+ ID      Q ++L PTRELA Q   V   LG ++N+Q     GGT++ +DI +L    H++ GTPGR+ D+ ++     +   MLV+DEAD+LL+  F+  +  + R+LP   Q+++ SAT P  V D   K++  P  V+   DELTL+GI QY+  VE E  K   L  L+  L I Q++IFCN+  +V+ L  K+ E  ++   +H +M Q  R+ +  DFR G  R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G
Sbjct:   69 AQSGTGKTATFSISILQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKG 362          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: FAL1_ASPTN (ATP-dependent RNA helicase fal1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=fal1 PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 2.003e-60
Identity = 124/294 (42.18%), Postives = 180/294 (61.22%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKTA F I  L+ ID      Q ++L PTRELA Q   V   LG ++N+Q     GGT++ +DI +L    H++ GTPGR+ D+ ++     +   MLV+DEAD+LL+  F+  +  + R+LP   Q+++ SAT P  V D   K++  P  V+   DELTL+GI QY+  VE E  K   L  L+  L I Q++IFCN+  +V+ L  K+ E  ++   +H +M Q  R+ +  DFR G  R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G
Sbjct:   69 AQSGTGKTATFAISILQVIDTVVRESQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKG 362          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_EMENI (ATP-dependent RNA helicase eIF4A OS=Emericella nidulans GN=tif1 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 2.573e-60
Identity = 119/294 (40.48%), Postives = 183/294 (62.24%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKTA F I AL+K+D +    Q +I+ PTRELA Q  +V   +G  +NIQ     GGT+++DD+  L +   ++VGTPGRI D+ ++ V       M ++DEAD++LS  F   +  + + LP + Q+++ SAT P  V +   K+++ P  ++    ELTL+GI Q+Y  VE E  K+  L+ L+  + I Q++IFCN+  +V+ L  K+T   ++   +H  M Q  R+ +  +FR+G+ R L+ TDL  RGID+Q V++VIN+D P N E Y+HR+GR GRFG  G
Sbjct:   92 AQSGTGKTATFSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRDDMNALREGPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKG 385          

HSP 2 Score: 23.8682 bits (50), Expect = 2.573e-60
Identity = 10/28 (35.71%), Postives = 17/28 (60.71%), Query Frame = 2
Query:  875 GIAVNLITYEDRFNLYRIEQELGTEINK 958
            G+A+N +T +D   +  IEQ   T+I +
Sbjct:  385 GVAINFVTADDVRMMREIEQFYSTQIEE 412          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_COCIM (ATP-dependent RNA helicase eIF4A OS=Coccidioides immitis GN=TIF1 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 2.574e-60
Identity = 118/294 (40.14%), Postives = 184/294 (62.59%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKTA F I AL+K+D +    Q +IL PTRELA Q  +V   +G  ++++     GGT++++DI  L     ++VGTPGR+ D+ ++ V       M V+DEAD++LS  F   +  + +FLP + Q+++ SAT P  V D   K+++ P  ++    ELTL+GI Q+Y  VE E  K+  L+ L+  + I Q++IFCN+  +V+ L  K+    ++   +H +M Q+ R+ +  +FR+G+ R L+ TDL  RGID+Q V++VIN+D P N E Y+HR+GR GRFG  G
Sbjct:   69 AQSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQIQKVVVAIGDFMSVECHACIGGTNVREDIKALNDGPQVVVGTPGRVHDMIQRRVLKTDQMKMFVLDEADEMLSRGFTEQIYDIFQFLPQSTQVVLLSATMPQDVLDVTTKFMRDPVRILVKKAELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLIARDFTVSAMHGEMEQNQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKG 362          

HSP 2 Score: 23.8682 bits (50), Expect = 2.574e-60
Identity = 10/28 (35.71%), Postives = 17/28 (60.71%), Query Frame = 2
Query:  875 GIAVNLITYEDRFNLYRIEQELGTEINK 958
            G+A+N +T +D   +  IEQ   T+I +
Sbjct:  362 GVAINFVTADDVRMMREIEQFYSTQIEE 389          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A1_ARATH (Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana GN=TIF4A-1 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 2.616e-60
Identity = 124/294 (42.18%), Postives = 181/294 (61.56%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKTA FC   L+++D      Q ++L PTRELA Q  +V + LG +L ++V    GGTS+++D   L   VH++VGTPGR+ D+ K+      +  M V+DEAD++LS  F+  +  + + LP   Q+ +FSAT P    +   K++ KP  ++   DELTL+GI Q+Y  VE E  K+  L  L+  L I QS+IF N+  +V+ L  K+    ++    H  M Q+ R+ +  +FR+G+ R L+ TDL  RGID+Q V++VINFD P  PE YLHR+GRSGRFG  G
Sbjct:   83 AQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKG 376          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: FAL1_ASPOR (ATP-dependent RNA helicase fal1 OS=Aspergillus oryzae GN=fal1 PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 2.616e-60
Identity = 124/294 (42.18%), Postives = 180/294 (61.22%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKTA F I  L+ ID      Q ++L PTRELA Q   V   LG ++N+Q     GGT++ +DI +L    H++ GTPGR+ D+ ++     +   MLV+DEAD+LL+  F+  +  + R+LP   Q+++ SAT P  V D   K++  P  V+   DELTL+GI QY+  VE E  K   L  L+  L I Q++IFCN+  +V+ L  K+ E  ++   +H +M Q  R+ +  DFR G  R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G
Sbjct:   68 AQSGTGKTATFSISILQVIDTVVRESQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKG 361          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: FAL1_ASPNC (ATP-dependent RNA helicase fal1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=fal1 PE=3 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 2.616e-60
Identity = 124/294 (42.18%), Postives = 180/294 (61.22%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKTA F I  L+ ID      Q ++L PTRELA Q   V   LG ++N+Q     GGT++ +DI +L    H++ GTPGR+ D+ ++     +   MLV+DEAD+LL+  F+  +  + R+LP   Q+++ SAT P  V D   K++  P  V+   DELTL+GI QY+  VE E  K   L  L+  L I Q++IFCN+  +V+ L  K+ E  ++   +H +M Q  R+ +  DFR G  R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G
Sbjct:   69 AQSGTGKTATFSISILQVIDTVVRESQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKG 362          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: FAL1_ASPFU (ATP-dependent RNA helicase fal1 OS=Aspergillus fumigatus GN=fal1 PE=3 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 2.616e-60
Identity = 124/294 (42.18%), Postives = 180/294 (61.22%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKTA F I  L+ ID      Q ++L PTRELA Q   V   LG ++N+Q     GGT++ +DI +L    H++ GTPGR+ D+ ++     +   MLV+DEAD+LL+  F+  +  + R+LP   Q+++ SAT P  V D   K++  P  V+   DELTL+GI QY+  VE E  K   L  L+  L I Q++IFCN+  +V+ L  K+ E  ++   +H +M Q  R+ +  DFR G  R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G
Sbjct:   68 AQSGTGKTATFSIGILQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKG 361          
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: IF4A_ASPNC (ATP-dependent RNA helicase eIF4A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif1 PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 3.356e-60
Identity = 119/294 (40.48%), Postives = 182/294 (61.90%), Query Frame = 3
Query:    3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPY-VINLMDELTLKGITQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878
            A++GTGKTA F I AL+KIDQ+    Q +I+ PTRELA Q  +V   +G  +NI+     GGT+++DD+  L     ++VGTPGRI D+ ++ V       + ++DEAD++LS  F   +  + + LP + Q+ + SAT P  V +   K+++ P  ++    ELTL+GI Q+Y  VE E  K+  L+ L+  + I Q++IFCN+  +V+ L  K+T   ++   +H  M Q  R+ +  +FR+G+ R L+ TDL  RGID+Q V++VIN+D P N E Y+HR+GR GRFG  G
Sbjct:   69 AQSGTGKTATFSISALQKIDQELKACQALIVAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVRDDMNALRAGPQVVVGTPGRIHDMIERRVLKTDQMKLFILDEADEMLSRGFTEQIYDIFQLLPQSTQVTLLSATMPQDVLEVTTKFMRDPIRILVKKQELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQGQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKG 362          

HSP 2 Score: 23.8682 bits (50), Expect = 3.356e-60
Identity = 10/28 (35.71%), Postives = 17/28 (60.71%), Query Frame = 2
Query:  875 GIAVNLITYEDRFNLYRIEQELGTEINK 958
            G+A+N +T +D   +  IEQ   T+I +
Sbjct:  362 GVAINFVTADDVRMMREIEQFYSTQIEE 389          
The following BLAST results are available for this feature:
BLAST of DY257952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IF4A_VANPO2.003e-6041.16ATP-dependent RNA helicase eIF4A OS=Vanderwaltozym... [more]
FAL1_NEOFI2.003e-6042.18ATP-dependent RNA helicase fal1 OS=Neosartorya fis... [more]
FAL1_ASPTN2.003e-6042.18ATP-dependent RNA helicase fal1 OS=Aspergillus ter... [more]
IF4A_EMENI2.573e-6040.48ATP-dependent RNA helicase eIF4A OS=Emericella nid... [more]
IF4A_COCIM2.574e-6040.14ATP-dependent RNA helicase eIF4A OS=Coccidioides i... [more]
IF4A1_ARATH2.616e-6042.18Eukaryotic initiation factor 4A-1 OS=Arabidopsis t... [more]
FAL1_ASPOR2.616e-6042.18ATP-dependent RNA helicase fal1 OS=Aspergillus ory... [more]
FAL1_ASPNC2.616e-6042.18ATP-dependent RNA helicase fal1 OS=Aspergillus nig... [more]
FAL1_ASPFU2.616e-6042.18ATP-dependent RNA helicase fal1 OS=Aspergillus fum... [more]
IF4A_ASPNC3.356e-6040.48ATP-dependent RNA helicase eIF4A OS=Aspergillus ni... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAB2BD07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257952 ID=DY257952; Name=DY257952; organism=Citrus clementina; type=EST; length=1192bp
GAGCTAAGAATGGTACCGGGAAGACAGCTGCCTTCTGCATTCCAGCATTG
GAAAAGATTGACCAAGATAACAATGTGATTCAAGTTGTTATCCTTGTTCC
AACAAGAGAGTTGGCTCTTCAGACATCCCAAGTCTGTAAGGAGCTGGGGA
AGCATTTGAATATTCAAGTCATGGTTACCACTGGTGGAACCAGTCTTAAG
GATGATATTATGCGTTTGTATCAACCTGTTCATTTGCTTGTTGGAACTCC
TGGAAGAATACTAGATCTTTCTAAGAAGGGTGTTTGCATTTTGAAAGATT
GTTCAATGCTTGTTATGGATGAGGCTGATAAGCTTTTGTCACCAGAGTTC
CAACCTTCAGTAGAGCAGCTTATTCGTTTTCTTCCTGCAAATCGTCAAAT
TTTAATGTTTTCAGCTACTTTCCCTGTTACCGTCAAGGACTTTAAAGATA
AGTACCTACAAAAACCATATGTTATTAATCTGATGGATGAGCTTACTCTC
AAGGGAATTACCCAATACTATGCTTTTGTTGAAGAAAGGCAGAAAGTCCA
CTGCCTCAACACACTTTTCTCTAAGTTGCAAATTAATCAATCTATCATTT
TCTGCAATTCGGTGAATCGGGTTGAACTCCTTGCCAAGAAAATTACAGAA
CTTGGGTACTCTTGTTTTTATATCCATGCAAAGATGCTGCAAGACCATCG
CAACAGAGTATTTCATGACTTCCGCAATGGTGCATGCAGGAATCTTGTTT
GTACTGACCTATTTACGAGGGGTATAGACATTCAAGCAGTGAATGTTGTC
ATTAACTTTGATTTTCCTAAGAACCCGGAGACATATCTGCACAGAGTTGG
TCGATCTGGAAGGTTTGGACACCTGGGATAGCTGTGAATTTGATTACTTA
CGAGGACCGCTTCAACTTGTATAGGATTGAGCAAGAACTCGGGACTGAAA
TTAACAAATACCTCCGCATATTGATCAGGCCATTTACTGCCGGTGAATTA
AGGCCGGGAATCTGCTAAAAAAACCAAGGGTGGTAACAAAGGGATTTCCT
GAAGGTGGTTGATTCAAGGGCACTGGGCTCCTGCACCTTAAAGAAACATT
TTTTTGAAACGGGGTTTATTGTGGTTTTGGGGGAAAAAAATTGGCCACCG
GGGGGGCCGGGGGCCAAATAAAACCCCTGGAAATCCCCTTTT
back to top