DY257956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257956 vs. ExPASy Swiss-Prot
Match: RS7_METVS (30S ribosomal protein S7P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps7p PE=3 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 2.985e-38 Identity = 86/191 (45.03%), Postives = 123/191 (64.40%), Query Frame = 2 Query: 236 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 805 ++KLF +W V V D SL +I + + +PHTAGR S K F K + +VERL N LM N GKK + I++ A+ I+ T +NPIQV+VDA+ NSGPRE+ TRI G+ Q+VD+SP RR++ A ++ GA + A ++ K+IA+CLADEL+ A+K S+A+KKK+E ERVA++ R Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISL----NPVLIPHTAGRNSKKMFDKNKMHVVERLANKLMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASKADMQKSFAVKKKEEKERVAQSAR 194
BLAST of DY257956 vs. ExPASy Swiss-Prot
Match: RS7_METTP (30S ribosomal protein S7P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps7p PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 5.091e-38 Identity = 78/189 (41.27%), Postives = 126/189 (66.67%), Query Frame = 2 Query: 239 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 805 +K+F +W +V++ D+S+ YI ++ V HT GR++ ++F+K++ +VERL N +M +N G+K +A RIV+ A +IIH T +NP+ V+V A+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ L+ GA +++F++ ++I CLADE+I AA S+A+ +KD IERVAKA R Sbjct: 1 MKVFGKWDASEVEIPDLSVKGYINLKPR----IVLHTGGRHAKQQFKKSELHVVERLINKMMRKEKNTGQKQIAYRIVEEAFDIIHSRTKENPLSVLVRAISNAGPREEVVRLKYGGITVPKAVDTAPQRRVDTALMLIAKGAWQASFKSRRSIQNCLADEIIAAANYDVKSFAVSRKDSIERVAKAAR 185
BLAST of DY257956 vs. ExPASy Swiss-Prot
Match: RS7_METMA (30S ribosomal protein S7P OS=Methanosarcina mazei GN=rps7p PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 5.091e-38 Identity = 78/188 (41.49%), Postives = 124/188 (65.96%), Query Frame = 2 Query: 242 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 805 K+F +W +V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+LM N GKK + +R V+ A +II+ T QNPIQ++VDA+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ ++ G +AF++ +++AECLA ELI AA + S++I +KD ERVAKA R Sbjct: 6 KIFGKWDPTEVEVRDLGIKRYVSLAPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIINRKTQQNPIQILVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAKERVAKAAR 189
BLAST of DY257956 vs. ExPASy Swiss-Prot
Match: RS7_METAC (30S ribosomal protein S7P OS=Methanosarcina acetivorans GN=rps7p PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 6.650e-38 Identity = 78/188 (41.49%), Postives = 124/188 (65.96%), Query Frame = 2 Query: 242 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 805 K+F +W +V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+LM N GKK + +R V+ A +I++ T QNPIQV+VDA+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ ++ G +AF++ +++AECLA ELI AA + S++I +KD ERVAKA R Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAKERVAKAAR 189
BLAST of DY257956 vs. ExPASy Swiss-Prot
Match: RS7_HALSA (30S ribosomal protein S7P OS=Halobacterium salinarium GN=rps7p PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 6.650e-38 Identity = 87/201 (43.28%), Postives = 123/201 (61.19%), Query Frame = 2 Query: 203 AQSQDPSQPQYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 805 A+S+D + + KLF +W ++ D S Y+ V T V HT GR++ K+F+K++ IVERL N LM G N GKK A++IV+ A +I+H TD+NPIQV+V AV N+ PRE+ R+ G+ QAVD +P RRV+QA+ L GA ++F+ AE LA++L AA + +YAI +K E ERVA A R Sbjct: 16 AESEDTQEVAANAKLFGKWDVAEIHYEDPSTRRYLAV------TPVAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAPQRRVDQALKFLADGAHSASFKTPTDAAEALANQLAGAADYNVQTYAIGQKKEKERVAAAAR 210
BLAST of DY257956 vs. ExPASy Swiss-Prot
Match: RS7_HALMA (30S ribosomal protein S7P OS=Haloarcula marismortui GN=rps7p PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 6.650e-38 Identity = 88/206 (42.72%), Postives = 121/206 (58.74%), Query Frame = 2 Query: 188 ATAVVAQSQDPSQPQYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 805 A A A+ +P + KLF W D++ +D S YI V T + HT GR++ K+F+K++ IVERL N LM N GKK +A IV A E++H TD+NPIQV+V AV NS PRE+ R+ G+ +AVD++P RRV+QA+ L G +F+ T AE LA +LI AA +YA+ +K+E ERVA A R Sbjct: 9 ADADAAEESEPETAR--AKLFGEWDITDIEYSDPSTERYITV------TPIAHTMGRHADKQFKKSEISIVERLINRLMQTDENTGKKQLATSIVTEAFELVHERTDENPIQVLVSAVENSAPREETVRLKYGGISVPKAVDVAPQRRVDQALKFLAEGVYGGSFKTTTTAAEALAQQLIGAANDDVQTYAVNQKEEKERVAAAAR 206
BLAST of DY257956 vs. ExPASy Swiss-Prot
Match: RS7_METBF (30S ribosomal protein S7P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps7p PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 8.685e-38 Identity = 79/189 (41.80%), Postives = 123/189 (65.08%), Query Frame = 2 Query: 239 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 805 +K+F +W +V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+LM N GKK +R V+ A +I+ T QNPIQV+VDA+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ ++ G +AF++ +++AECLA ELI AA + S+AI +KD ERVAKA R Sbjct: 1 MKIFGKWDPTEVEVRDLGIKRYVSLTPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTEINTGKKQKTLRAVEEAFDIVSKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNNAAFKSKRSVAECLATELIGAANRDTKSFAINRKDAKERVAKAAR 185
BLAST of DY257956 vs. ExPASy Swiss-Prot
Match: RS7_METHJ (30S ribosomal protein S7P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps7p PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.527e-37 Identity = 80/187 (42.78%), Postives = 118/187 (63.10%), Query Frame = 2 Query: 245 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 805 LFNRW +V + D ++ Y+ + ++ VPH+ GR + + F KA IVERL N LM N GKK +A+RIV+ A EI+H T +NPI+V+ DAV N+GPRE+ R+ G+ ++VD +P+RRVN A+ L+ G ++ + K +A LA+ELI AA G Y++ K++E ERVAK+ R Sbjct: 12 LFNRWDTSEVTIRDPGIARYVNL----NSMMVPHSCGRLTRQEFHKANMLIVERLINQLMRTEVNTGKKQLAIRIVRDAFEIVHQKTKKNPIEVLCDAVANAGPREETVRLKYGGINVPKSVDTAPMRRVNTAVGLIAAGVYSASHKKKKPVANALAEELIAAANGDVKCYSVAKREERERVAKSAR 194
BLAST of DY257956 vs. ExPASy Swiss-Prot
Match: RS7_METBU (30S ribosomal protein S7P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps7p PE=3 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 2.527e-37 Identity = 77/188 (40.96%), Postives = 125/188 (66.49%), Query Frame = 2 Query: 242 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 805 KLF +W +V+V D + Y+ + VPHT+G+++ ++F K+ IVERL N++M + +N GKK +A+RIV A +I++ T +NP+QV+V+AV N+GPRE+ R+ G+ +AVD +P RRV+ A+ ++ G+ ++AF++ ++ AECLA ELI A+ + ++I +KD ERVAKA R Sbjct: 3 KLFGKWDLTEVEVADAGIKRYVNLDPV----IVPHTSGKHARQQFNKSDITIVERLVNNVMRNAQNTGKKQIALRIVDEAFDIVNSKTKKNPVQVLVEAVSNAGPREEVVRLKYGGISVPKAVDTAPQRRVDHALRNISIGSNQTAFKSKRSAAECLASELIAASNRDAKCFSINRKDGKERVAKAAR 186
BLAST of DY257956 vs. ExPASy Swiss-Prot
Match: RS7_METB6 (30S ribosomal protein S7P OS=Methanoregula boonei (strain 6A8) GN=rps7p PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 5.629e-37 Identity = 83/203 (40.89%), Postives = 126/203 (62.07%), Query Frame = 2 Query: 197 VVAQSQDPSQPQYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 805 V AQ + + PQ LFN+W +V+V D SL Y+ + +PH+ G++S + F KA IVERL N LM N GKK +A+ IV+ A E+I+ T +NPI+V+V+A+ N+GPRE+ R+ G+ ++VD +PLRRV+ AI + +S+ ++ K + LADELI A+KG + Y++ KK+E ER+AK+ R Sbjct: 6 VKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQ----IIPHSCGKFSRQEFNKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGPREETVRLKYGGINVPKSVDTAPLRRVDSAIGFIAEAVWKSSRKSKKPASAILADELIAASKGDAKCYSVGKKEEKERIAKSAR 204 The following BLAST results are available for this feature:
BLAST of DY257956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257956 ID=DY257956; Name=DY257956; organism=Citrus clementina; type=EST; length=1028bpback to top |