DY257957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257957 vs. ExPASy Swiss-Prot
Match: RS11_GEOMG (30S ribosomal protein S11 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rpsK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11 Identity = 39/108 (36.11%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 149 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 472 GVAHI A+FN+T I +TD +G GG K R +S+P+AA +AA+D +++ ++ G+ ++ + ++ +SALRAL +G + I DVTPIP Sbjct: 21 GVAHIQATFNNTIITITDPAGNVVAWSSAGGKGFKGSR-KSTPFAAQVAAEDCAKKAQDHGMRSVEVYVKG--------PGSGRESALRALQAAGFHVNFIRDVTPIP 119
BLAST of DY257957 vs. ExPASy Swiss-Prot
Match: RS11_AZOVD (30S ribosomal protein S11 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=rpsK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11 Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = 2 Query: 143 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 472 V G+AHI ASFN+T + +TD G +GG + R +S+P+AA +AA+ Q E G+ L + ++ +SA+RAL G KI I DVTPIP Sbjct: 17 VDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSR-KSTPFAAQVAAERAGQAALEYGLKNLDVNVKG--------PGPGRESAVRALNACGYKIASITDVTPIP 117
BLAST of DY257957 vs. ExPASy Swiss-Prot
Match: RS11_ACTPJ (30S ribosomal protein S11 OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=rpsK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11 Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 2 Query: 149 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 472 GVAHI ASFN+T + +TD G GG + R +S+P+AA +AA+ ++ KE G+ L + ++ +S +RAL +G +I I DVTPIP Sbjct: 19 GVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSR-KSTPFAAQVAAERCAEAVKEFGLKNLEVMVKG--------PGPGRESTIRALNAAGFRITNITDVTPIP 117
BLAST of DY257957 vs. ExPASy Swiss-Prot
Match: RS11_ACTP7 (30S ribosomal protein S11 OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=rpsK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11 Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 2 Query: 149 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 472 GVAHI ASFN+T + +TD G GG + R +S+P+AA +AA+ ++ KE G+ L + ++ +S +RAL +G +I I DVTPIP Sbjct: 19 GVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSR-KSTPFAAQVAAERCAEAVKEFGLKNLEVMVKG--------PGPGRESTIRALNAAGFRITNITDVTPIP 117
BLAST of DY257957 vs. ExPASy Swiss-Prot
Match: RS11_ACTP2 (30S ribosomal protein S11 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=rpsK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11 Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 2 Query: 149 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 472 GVAHI ASFN+T + +TD G GG + R +S+P+AA +AA+ ++ KE G+ L + ++ +S +RAL +G +I I DVTPIP Sbjct: 19 GVAHIHASFNNTIVTITDRQGNALAWATAGGSGFRGSR-KSTPFAAQVAAERCAEAVKEFGLKNLEVMVKG--------PGPGRESTIRALNAAGFRITNITDVTPIP 117 The following BLAST results are available for this feature:
BLAST of DY257957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257957 ID=DY257957; Name=DY257957; organism=Citrus clementina; type=EST; length=740bpback to top |