DY257965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257965 vs. ExPASy Swiss-Prot
Match: GH36_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.6 OS=Oryza sativa subsp. japonica GN=GH3.6 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 2.817e-30 Identity = 62/152 (40.79%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 4 WKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYIAGKLPLVGTMYASSECYFGVNLKPLSNPADFSFTLLPNMCYFEFLPLEGENGTLFSIEFNEEEEVPNDKLVDLGHVRAGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFLFICR 459 W+G+L QLWP A+YI V TG+M QY P+++++ LP++GT Y +SEC G+NL+ S P + ++ LLP YFEF+P + + + VD+ V AG YELV TTF GL RY++GDV+++ GF++ +P+ F+ R Sbjct: 126 WRGVLRQLWPDARYISCVTTGTMEQYFPAIKHFAGEALPVLGTDYLASECAIGINLERTSPPEETTYVLLPRAAYFEFIPFDMDAA---------GRGAAAAEPVDIAGVEAGKTYELVATTFRGLYRYKVGDVVKIAGFHHSSPRLQFVTR 268
BLAST of DY257965 vs. ExPASy Swiss-Prot
Match: GH33_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.3 OS=Oryza sativa subsp. japonica GN=GH3.3 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 2.823e-22 Identity = 60/156 (38.46%), Postives = 91/156 (58.33%), Query Frame = 1 Query: 1 SWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYIAGKLPLVGTMYASSECYFGVNLKPLSNPADFSFTLLPNMCYFEFLPLE---GENGTLFSIEFNEEEEVPNDKLVDLGHVRAGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFLFICR 459 +W G++ LWP A+Y+ ++TGSM Y+ L +Y AG LPLV Y +SE + G N++P + P +FT+LP++ YFEF+PL+ G+ G + E E V L V AG YE+V+TTFAG R + V +Y ++ +++ ICR Sbjct: 292 NWYGVIPALWPNARYVYGIMTGSMEHYVKKLRHY-AGGLPLVAAEYGASEGWVGANVEPGTPPERATFTVLPDIAYFEFIPLKPVAGDGG------YAEAEP------VGLTEVAAGELYEVVMTTFAGNTRSSSSCMTLVAYYYLQSKKWMNICR 434
BLAST of DY257965 vs. ExPASy Swiss-Prot
Match: GHDC_HUMAN (GH3 domain-containing protein OS=Homo sapiens GN=GHDC PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.649e-12 Identity = 51/158 (32.28%), Postives = 78/158 (49.37%), Query Frame = 1 Query: 7 KGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYIAGKLPLVGTMYASSECYFGVNLKPLSNPADFSFTLLPNMCYFEFLPLEGENGTLFSIEFNEEEEVPNDKLVDLGHVRAGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFLFICRRNVVLSI 480 +G+ +LWP+ + + + G A+ + +L L YA+S G+NL+P P + L P + E LP++ GT +EE + L L + G YELV+T A L R R+GDV++V G YN+ P FICR + LS+ Sbjct: 249 RGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLGLNLQP-EQPHGL-YLLPPGAPFIELLPVK--EGT--------QEEAASTLL--LAEAQQGKEYELVLTDRASLTRCRLGDVVRVVGAYNQCPVVRFICRLDQTLSV 392
BLAST of DY257965 vs. ExPASy Swiss-Prot
Match: GHDC_MOUSE (GH3 domain-containing protein OS=Mus musculus GN=Ghdc PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.995e-11 Identity = 48/165 (29.09%), Postives = 75/165 (45.45%), Query Frame = 1 Query: 7 KGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYIAGKLPLVGTMYASSECYFGVNLKPLSNPADFSFTLLPNMCYFEFLPLEGENGTLFSIEFNEEEEVPNDKLVDLGHVRAGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFLFICRRNVVLSIDYDKTHE 501 +G+ +LWP+ + + + +G A+ + +L L YA+S +NL P S+ L P + + E LP++ E +EE L D + YELV+T L R R+GDV+QV G YN+ P F CR L++ + T E Sbjct: 250 RGLARRLWPKLQVVVTLDSGGQAEAVAALRVLWCQGLAFFSPAYAASGGVVALNLWP--ERPQGSYLLPPGVPFIELLPIK---------EGTQEEAASTLLLTDAQREKE---YELVLTNHTSLTRCRLGDVVQVVGTYNQCPVVRFTCRLGQTLNVRGEVTDE 400 The following BLAST results are available for this feature:
BLAST of DY257965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257965 ID=DY257965; Name=DY257965; organism=Citrus clementina; type=EST; length=981bpback to top |