DY257967

Overview
NameDY257967
Unique NameDY257967
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1133
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9833 contig Ccv1_Contig9833:10..1136. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257967 vs. ExPASy Swiss-Prot
Match: URIC_DROME (Uricase OS=Drosophila melanogaster GN=Uro PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 1.031e-34
Identity = 106/312 (33.97%), Postives = 161/312 (51.60%), Query Frame = 2
Query:   74 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECV------------------------SVDGQ-LHEHGFKLG-SERHTTEVTVQESGTLQ-MTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKD-KDIIVKFEDDVYLPTDEPHGSI 925
            +GK  V+V  V R+    H + E+ V   L   S   Y   +NSDIVATD+ KNTVY  AK+   + S E+FA+LLA+HF + Y  V  A V +   PW+ V                        S+D + LH H F    +  H  +V ++ +   Q + +GI+GL +LKTT+S F  F+ D++ +LPD  +R+ +T V  +W YS         + L F   +  VK +++  F G P+ GV S SVQ TLY   + VL     +S++ + MPN H+   N  +K  + I     ++V++P D+PHG+I
Sbjct:   39 YGKDAVKVLHVSRNGPV-HAIQEFEVGTHLKLYSKKDYYQGNNSDIVATDSQKNTVYLLAKKHGIE-SPEKFALLLARHFINKYSHVEEAHVHVEAYPWQRVCQEETRTNVNGKCENGVQGNCDFSSIDNRSLHNHAFIFTPTALHYCDVVIRRTDPKQTVITGIKGLRVLKTTQSSFVNFVNDEFRSLPDQYDRIFSTVVDCSWEYS-------DTENLDFLRAWQTVKNIIIRNFAGDPQVGVSSPSVQHTLYLSERQVLDVLPQVSVISMTMPNKHYF--NFDTKPFQKIAPGDNNEVFIPVDKPHGTI 339          
BLAST of DY257967 vs. ExPASy Swiss-Prot
Match: URIC_DROVI (Uricase OS=Drosophila virilis GN=Uro PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.758e-34
Identity = 105/308 (34.09%), Postives = 153/308 (49.68%), Query Frame = 2
Query:   74 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDG---------------------QLHEHGFKLGSERHT--TEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFE-DDVYLPTDEPHGSI 925
            +GK  V+V  + R K   H + E  V   L   S   Y+  +NSD+VATD+ KNTVY  AK+   + S E+FA++LAKHF S Y  V    V +   PW+ ++ D                      QLH H F      H     +  ++     + SGI+GL +LKTT+S F  F+ D++  L D  +R+ +T V  +W YS     N       F   +  VK +++  F G P  G+ S SVQ TLY   K VL     +S+V + MPN H+   N  +K    +V  E ++V++PTD+PHG+I
Sbjct:   33 YGKDAVKVMHINR-KGPVHSIQELEVGTHLKLYSNKDYMLGNNSDVVATDSQKNTVYLLAKKHGIE-SPEKFALILAKHFLSTYAHVEEVHVHVEAYPWQRMTQDVSDNIGKGYCENNCNSRSNGNCQLHNHAFIFTPTAHDYCDVILTRQDPKQTVISGIKGLRVLKTTQSSFVNFVDDEFRTLADQYDRIFSTVVECSWEYSDTESVN-------FLHAWETVKDIVVRNFAGDPSVGIPSPSVQHTLYLSEKQVLDVLPQVSVVSMTMPNKHYF--NFDTKPFQQLVPGENNEVFIPTDKPHGTI 329          
BLAST of DY257967 vs. ExPASy Swiss-Prot
Match: URIC_EMENI (Uricase OS=Emericella nidulans GN=uaZ PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.944e-33
Identity = 96/293 (32.76%), Postives = 152/293 (51.88%), Query Frame = 2
Query:   71 RHGKARVRVARVWRS-KEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGFKLGSER-HTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVF-----NLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFEDDVYLPTDEPHGSIE 928
            R+GK  VRV +V +  K G   + E  V + L  +   +Y   DNS IVATD+IKNT++  AK+       E F  +L  HF + Y+ +  A   I+   W  +++DG+ H H F   SE     +V V E   + + S I  L +LK+T S F GF+RD+YT LP+  +R+L+T+V +TW +   S       N+P+    F E + A + + + TF         SASVQ+T+Y+M + +L     +  V   +PN H+  ++LS          + +V++P   P+G I+
Sbjct:    8 RYGKDNVRVYKVHKDPKTGVQTVTEMTVCVLLEGEIDTSYTKADNSVIVATDSIKNTIFILAKQ-NPVTPPELFGSILGTHFINKYKHIHVAHTNIITHRWTRLNIDGKPHSHSFVRDSEETRNVQVDVTEGVGIDIKSSINKLTVLKSTGSQFWGFVRDEYTTLPEVWDRILSTDVEATWAWKRFSGLDEVRGNVPK----FDETWEAARNITLKTFAEEE-----SASVQATMYKMGEQILAYQPLLETVEYSLPNKHYFEIDLSWHKGLKNTGKDAEVFVPQTNPNGLIK 290          
BLAST of DY257967 vs. ExPASy Swiss-Prot
Match: URIC_PICJA (Uricase OS=Pichia jadinii PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.905e-29
Identity = 88/293 (30.03%), Postives = 156/293 (53.24%), Query Frame = 2
Query:   74 HGKARVRVARVWRSKEG--RHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYE---SVFNLPQ--KPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFEDDVYLPTDEPHGSIE 928
            +GK  V+  +V +  +   +  ++E  V+  L      +Y + DNS IV TDT+KNT+   AK   E   +E FA  LA HF   Y  V+   V+IV+  W   +VDG+ H+H F   G E+  T++  + SG  +++S I+ L +LK+T S F G+ +  +T L  T +R+L+T+V +TW +  +   SV+++ +      F   Y   +++ + TF         S SVQ+T++ MA  +L +   +  V   +PN H+  ++L  K     ++ +++++ P+  P+G I+
Sbjct:   10 YGKDNVKFLKVKKDPQNPKKQEVMEATVTCLLEGGFDTSYTEADNSSIVPTDTVKNTILVLAKTT-EIWPIERFAAKLATHFVEKYSHVSGVSVKIVQDRWVKYAVDGKPHDHSFIHEGGEKRITDLYYKRSGDYKLSSAIKDLTVLKSTGSMFYGYNKCDFTTLQPTTDRILSTDVDATWVWDNKKIGSVYDIAKAADKGIFDNVYNQAREITLTTF-----ALENSPSVQATMFNMATQILEKACSVYSVSYALPNKHYFLIDLKWKG----LENDNELFYPSPHPNGLIK 292          
BLAST of DY257967 vs. ExPASy Swiss-Prot
Match: URIC_SCHPO (Probable uricase OS=Schizosaccharomyces pombe GN=SPCC1223.09 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 9.344e-28
Identity = 84/272 (30.88%), Postives = 133/272 (48.90%), Query Frame = 2
Query:  116 KEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEE-FAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFEDDVYLPTDEPHGSI 925
            K   H + E +V   L  +   +Y   DNS +V TDT KNT+Y  AK     +SV E FA  LAKHF   Y+ +  A + I   PW  + V G+ H H F +   E   T V   E     + S ++ + +LK+T SGF  F + ++T LP+  +R+ +T +   + + +   F        F   Y  VK++ ++TF     E     SVQ+T+Y+MA  ++  +  I+ V+  +PN H+  +NL+  + D +      +Y P   P G I
Sbjct:   27 KTKTHTVYEMDVQSLLTGELEESYTKADNSIVVPTDTQKNTIYVFAKN--NDVSVPEVFAAKLAKHFVDKYKHIHGAALDITITPWTRMEVQGKPHSHSFIRNPGETRKTHVVFSEGKGFDVVSSLKDVLVLKSTGSGFTNFHKCEFTTLPEVTDRIFSTSIDCNYTFKHFDTFE-ELAGFDFNSIYEKVKEITLETFALDDSE-----SVQATMYKMADTIINTYPAINEVYYALPNKHYFEINLAPFNIDNLGS-NCSLYQPQAYPSGYI 289          
BLAST of DY257967 vs. ExPASy Swiss-Prot
Match: PUCL_BACSB (Uric acid degradation bifunctional protein OS=Bacillus sp. (strain TB-90) GN=uao PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 1.226e-11
Identity = 72/278 (25.90%), Postives = 121/278 (43.53%), Query Frame = 2
Query:  128 HFMVEWNVSISLLSDSII-AYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSV----DGQLHEHGFKLGSERHTT---EVTVQESGTLQMT---SGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRY-SYESVFNLPQKPLYFTERYLAVKKV--LMDTFFGPPKEGVYSASVQSTLYQMAKAVLGRFHDISLVHLKMPNIHFLPVNLSSKDKDIIVKFEDDVYLPTDEPHG 919
            H +   NV IS+    ++ ++   DNS +VATD++KN +  K        ++E F   +A  F   Y  +    +   E P+E        +    E  FK     + T    +   E  TL +T   SG+ GL L+K + + F GFIRD+YT LP+   R L   +   W+Y + E  F          E Y+A +++  +  + F   +    + S+Q  +Y + + +L RF  +  V+ +  N      +   K  + I + E  VY     P+G
Sbjct:  212 HILFGVNVKISVGGTKLLTSFTKGDNSLVVATDSMKNFIQ-KHLASYTGTTIEGFLEYVATSFLKKYSHIEKISLIGEEIPFETTFAVKNGNRAASELVFKKSRNEYATAYLNMVRNEDNTLNITEQQSGLAGLQLIKVSGNSFVGFIRDEYTTLPEDSNRPLFVYLNIKWKYKNTEDSFGTN------PENYVAAEQIRDIATSVFHETE----TLSIQHLIYLIGRRILERFPQLQEVYFESQN------HTWDKIVEEIPESEGKVYTEPRPPYG 472          
The following BLAST results are available for this feature:
BLAST of DY257967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
URIC_DROME1.031e-3433.97Uricase OS=Drosophila melanogaster GN=Uro PE=1 SV=... [more]
URIC_DROVI1.758e-3434.09Uricase OS=Drosophila virilis GN=Uro PE=2 SV=1[more]
URIC_EMENI1.944e-3332.76Uricase OS=Emericella nidulans GN=uaZ PE=3 SV=1[more]
URIC_PICJA2.905e-2930.03Uricase OS=Pichia jadinii PE=3 SV=1[more]
URIC_SCHPO9.344e-2830.88Probable uricase OS=Schizosaccharomyces pombe GN=S... [more]
PUCL_BACSB1.226e-1125.90Uric acid degradation bifunctional protein OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2BF04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257967 ID=DY257967; Name=DY257967; organism=Citrus clementina; type=EST; length=1133bp
GAAAAAGAAAAAGAAAGAAAATTAATAACCAAAAATGGCGAAAAAAATAG
AGGGATTCAATTTCGAGCAGCGACACGGGAAAGCTCGAGTGAGAGTTGCA
AGAGTTTGGCGAAGCAAAGAAGGCCGCCATTTTATGGTCGAATGGAACGT
CAGCATCAGCTTGCTCTCCGATTCCATCATCGCCTACGTTGACGACGATA
ACTCCGATATCGTCGCCACCGATACCATAAAAAATACTGTTTACGCTAAA
GCTAAGGAATGTAAAGAGCAACTTTCAGTCGAGGAATTTGCTATTTTACT
CGCCAAGCACTTTACGTCCTTTTATCGCCAGGTTACTAGTGCCATAGTGA
GGATAGTGGAAAAGCCATGGGAATGTGTATCCGTGGATGGGCAACTGCAT
GAGCATGGTTTCAAACTTGGATCCGAGAGGCACACAACAGAGGTTACAGT
ACAGGAGTCTGGTACTTTGCAGATGACTTCTGGCATTGAAGGACTGGCTT
TGCTGAAGACAACCAAGTCAGGTTTTGAAGGGTTTATTAGGGACAAATAC
ACGGCTCTGCCTGATACTCAAGAAAGGATGCTGGCAACAGAGGTCACTAG
TACGTGGAGGTATTCTTATGAATCTGTCTTTAACCTCCCACAGAAACCGC
TTTACTTCACAGAGAGATACCTGGCTGTGAAAAAAGTTCTGATGGATACT
TTCTTTGGTCCTCCGAAAGAGGGAGTATACAGTGCGTCTGTCCAAAGCAC
TCTTTACCAAATGGCAAAGGCCGTCCTTGGCAGGTTTCATGACATATCAT
TGGTCCATCTAAAAATGCCCAATATCCATTTCTTACCAGTTAATTTATCA
AGCAAGGACAAGGACATTATAGTGAAGTTTGAAGATGATGTGTATTTACC
AACAGACGAACCTCATGGATCAATCGAAAGCAGCTTCAGCAAGGTCTGGG
TCAAGATGTAGAAATGGTGCAAGATGTGAAGTGTACACTATGTGTTTCAT
CATTCTCAAAATAATAATTGCGACTGATTGGATCATGGTGGTTAATTTAA
AGTTTTATTTGTTGGATTAAGGCTTTGAACCTTTAAGCATCCCAAACTTG
CAAAACTTTTAAAAATTCCTTTTGTGGCCTGGG
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