DY258000

Overview
NameDY258000
Unique NameDY258000
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length752
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258000 vs. ExPASy Swiss-Prot
Match: CYC_SESIN (Cytochrome c OS=Sesamum indicum PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.405e-54
Identity = 99/111 (89.19%), Postives = 106/111 (95.50%), Query Frame = 2
Query:   29 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 361
            ASF++APPG+ K+GEKIFKTKCAQCHTV KGAGHKQGPNLNGLFGRQSGTTPGYSYSAANK MAVIW E TLY+YLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKE+TA
Sbjct:    1 ASFBZAPPGBVKSGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWGENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATA 111          
BLAST of DY258000 vs. ExPASy Swiss-Prot
Match: CYC_CANSA (Cytochrome c OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.835e-54
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 2
Query:   29 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 361
            ASF++APPG+ KAGEKIFKTKCA+CHTV +GAGHKQGPNLNGLFGRQSGTT GYSYSAANK MAV W++KTLY+YLLNPKKYIPGTKMVFPGLKKP++RADLIAYLKESTA
Sbjct:    1 ASFBZAPPGBSKAGEKIFKTKCAECHTVGRGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVTWZZKTLYDYLLNPKKYIPGTKMVFPGLKKPZBRADLIAYLKESTA 111          
BLAST of DY258000 vs. ExPASy Swiss-Prot
Match: CYC2_ARATH (Probable cytochrome c At1g22840 OS=Arabidopsis thaliana GN=At1g22840 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.396e-54
Identity = 101/112 (90.18%), Postives = 104/112 (92.86%), Query Frame = 2
Query:   26 MASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 361
            MASF+EAPPGN KAGEKIF+TKCAQCHTV  GAGHKQGPNLNGLFGRQSGTT GYSYSAANK  AV WEEK LY+YLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct:    1 MASFDEAPPGNAKAGEKIFRTKCAQCHTVEAGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNKAVEWEEKALYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112          
BLAST of DY258000 vs. ExPASy Swiss-Prot
Match: CYC_SOLLC (Cytochrome c OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 3.129e-54
Identity = 100/111 (90.09%), Postives = 104/111 (93.69%), Query Frame = 2
Query:   29 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 361
            ASF EAPPGNPKAGEKIFKTKCAQCHTV KGAGHK+GPNLNGLFGRQSGTT GYSYSAANK MAV W E TLY+YLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKE+TA
Sbjct:    1 ASFNEAPPGNPKAGEKIFKTKCAQCHTVEKGAGHKEGPNLNGLFGRQSGTTAGYSYSAANKNMAVNWGENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATA 111          
BLAST of DY258000 vs. ExPASy Swiss-Prot
Match: CYC_GOSBA (Cytochrome c OS=Gossypium barbadense PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.087e-54
Identity = 99/111 (89.19%), Postives = 104/111 (93.69%), Query Frame = 2
Query:   29 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 361
            ASF++APPG+ KAGEKIFKTKCAQCHTV KGAGHKQGPNLNGLFGRQSGTT GYSYSAANK MAV W E TLY+YLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK+STA
Sbjct:    1 ASFQZAPPGBAKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVQWGENTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKZSTA 111          
BLAST of DY258000 vs. ExPASy Swiss-Prot
Match: CYC_MAIZE (Cytochrome c OS=Zea mays PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.338e-54
Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 2
Query:   29 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 361
            ASF EAPPGNPKAGEKIFKTKCAQCHTV KGAGHKQGPNLNGLFGRQSGTT GYSYSAANK  AV+WEE TLY+YLLNP KYIPGTKMVFPGL KPQ+RADLIAYLKE+TA
Sbjct:    1 ASFSEAPPGNPKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNKAVVWEENTLYDYLLNPXKYIPGTKMVFPGLXKPQERADLIAYLKEATA 111          
BLAST of DY258000 vs. ExPASy Swiss-Prot
Match: CYC_RICCO (Cytochrome c OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.189e-53
Identity = 98/111 (88.29%), Postives = 104/111 (93.69%), Query Frame = 2
Query:   29 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 361
            ASF++APPG+ KAGEKIFKTKCAQCHTV KGAGHKQGPNLNGLFGRQSGTT GYSYSAANK MAV W E TLY+YLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK++TA
Sbjct:    1 ASFBZAPPGBVKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVQWGENTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKZATA 111          
BLAST of DY258000 vs. ExPASy Swiss-Prot
Match: CYC_SOLTU (Cytochrome c OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.028e-53
Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 2
Query:   29 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 361
            ASF EAPPGNPKAGEKIFKTKCAQCHTV KGAGHK+GPNLNGLFGRQSGTT GYSYS ANK MAV W E TLY+YLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKE+TA
Sbjct:    1 ASFGEAPPGNPKAGEKIFKTKCAQCHTVDKGAGHKEGPNLNGLFGRQSGTTAGYSYSNANKNMAVTWGENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATA 111          
BLAST of DY258000 vs. ExPASy Swiss-Prot
Match: CYC_ALLPO (Cytochrome c OS=Allium porrum PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.028e-53
Identity = 95/111 (85.59%), Postives = 103/111 (92.79%), Query Frame = 2
Query:   29 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 361
            A+F +APPG+ KAG+KIFK KCAQCHTV KGAGHKQGPNLNGLFGRQSGT  GYSYSAANK MAV+W++ TLY+YLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct:    1 ATFSZAPPGBZKAGQKIFKLKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTAAGYSYSAANKNMAVVWZZBTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 111          
BLAST of DY258000 vs. ExPASy Swiss-Prot
Match: CYC_ACENE (Cytochrome c OS=Acer negundo PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.649e-53
Identity = 100/111 (90.09%), Postives = 102/111 (91.89%), Query Frame = 2
Query:   29 ASFEEAPPGNPKAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKGMAVIWEEKTLYNYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 361
            ASF EAPPGNP AGEKIFKTKCAQCHTV KGAGHKQGPNLNGLFGRQSGTT GYSYSAANK MAV W   TLY+YLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLK+STA
Sbjct:    1 ASFAEAPPGNPAAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVNWGYNTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 111          
The following BLAST results are available for this feature:
BLAST of DY258000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
CYC_SESIN1.405e-5489.19Cytochrome c OS=Sesamum indicum PE=1 SV=1[more]
CYC_CANSA1.835e-5486.49Cytochrome c OS=Cannabis sativa PE=1 SV=1[more]
CYC2_ARATH2.396e-5490.18Probable cytochrome c At1g22840 OS=Arabidopsis tha... [more]
CYC_SOLLC3.129e-5490.09Cytochrome c OS=Solanum lycopersicum PE=1 SV=2[more]
CYC_GOSBA4.087e-5489.19Cytochrome c OS=Gossypium barbadense PE=1 SV=1[more]
CYC_MAIZE5.338e-5489.19Cytochrome c OS=Zea mays PE=1 SV=1[more]
CYC_RICCO1.189e-5388.29Cytochrome c OS=Ricinus communis PE=1 SV=1[more]
CYC_SOLTU2.028e-5389.19Cytochrome c OS=Solanum tuberosum PE=1 SV=1[more]
CYC_ALLPO2.028e-5385.59Cytochrome c OS=Allium porrum PE=1 SV=1[more]
CYC_ACENE2.649e-5390.09Cytochrome c OS=Acer negundo PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CC05ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258000 ID=DY258000; Name=DY258000; organism=Citrus clementina; type=EST; length=752bp
GAATTCGATTTTAACCACAATCAAAATGGCGTCGTTTGAGGAAGCTCCAC
CTGGTAATCCAAAGGCCGGGGAGAAAATCTTCAAGACCAAGTGCGCTCAG
TGCCACACCGTCGTGAAAGGCGCTGGTCACAAACAAGGACCAAATTTGAA
TGGACTTTTCGGGAGACAGTCCGGGACAACTCCCGGGTACTCCTATTCAG
CTGCTAACAAGGGTATGGCTGTTATTTGGGAAGAGAAAACGTTGTACAAT
TACTTGCTTAACCCCAAGAAGTATATTCCTGGAACAAAGATGGTCTTCCC
TGGATTGAAGAAGCCTCAGGATCGTGCAGACCTCATTGCCTATTTGAAGG
AGTCAACAGCCTGATTTTTGCTTAGTGTGGGCTATTTTGCAACCATGGGA
AGAAGATGCAGGAGTTTATTCATATTTGCAGCCTTGTTGATACAGATCTG
TCATAACGCTGGCAACGATGCATTCGTCCATGAAAGGCAACAATCAAGAC
TAGCTTGAAAGATCATATTCGTGCACAAACCTTCAAGAGCCATGCACGTG
GACAAGGGTATCTTTGATTTTTTGCAGTTAGAGGTTGAAGAATGGTTATA
GACATGATATGCAGAATGAGAGTATTAAAAGTACATTACTTAAATGTTGC
TGTCTGTAGGGATGTTTATGCCATCCAAGATAAAAATAGGTTAAAGTTTA
GGGGCTATTTTAACTTCAACTTTTTTATATTAAGTTAGCAAAATTTTATT
GC
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