DY258008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP2S_ASPFU (AP-2 complex subunit sigma OS=Aspergillus fumigatus GN=aps2 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37 Identity = 72/143 (50.35%), Postives = 105/143 (73.43%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKL-CNFVEW-RGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSL 536 ++ F+L+ +RQGK RL KWY+PY+ +E+ K+ E+ ++ R K NFVE+ R K+VY+RYA L+FC+C+D DNEL LE IH +VE+LD++FG+VCELDL+FNF+K Y ILDE+ +AGE++E+SK+ V + D L Sbjct: 2 VLSFILVQNRQGKTRLAKWYAPYSDEEKVKLKGEVHRLVAPRDQKYQSNFVEFKRSTKIVYRRYAGLFFCVCVDATDNELAYLEAIHFFVEVLDQFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRLEHLDKL 144
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP2S_EMENI (AP-2 complex subunit sigma OS=Emericella nidulans GN=aps2 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.147e-37 Identity = 72/143 (50.35%), Postives = 104/143 (72.73%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKL-CNFVEW-RGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSL 536 ++ F+L+ +RQGK RL KWY+PY+ +E+ K+ E+ ++ R K NFVE+ R K+VY+RYA L+FC C+D DNEL LE IH +VE+LD++FG+VCELDL+FNF+K Y ILDE+ +AGE++E+SK+ V + D L Sbjct: 2 VLSFILVQNRQGKTRLAKWYAPYSDEEKVKLKGEVHRLVAPRDQKYQSNFVEFKRSTKIVYRRYAGLFFCACVDATDNELAYLEAIHFFVEVLDQFFGNVCELDLVFNFYKVYAILDEVFLAGEIEETSKQVVLTRLEHLDKL 144
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP1S1_YEAST (AP-1 complex subunit sigma-1 OS=Saccharomyces cerevisiae GN=APS1 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.195e-36 Identity = 72/144 (50.00%), Postives = 106/144 (73.61%), Query Frame = 3 Query: 111 TMIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQE-DNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIA-GELQESSKKTVARLIAAQDSL 536 T + ++LL+SRQGK+RL KWY+ + E++K++++L+ IL R PK+CN +E+ +KVVYKRYASLYF + + + DNEL LEIIH +VE +D YFG+VCELD+IFNF K Y IL+E+++ G + ESS+K V + D++ Sbjct: 2 TQLKYLLLVSRQGKIRLKKWYTAMSAGEKAKIVKDLTPTILARKPKMCNIIEYNDHKVVYKRYASLYFIVGMTPDVDNELLTLEIIHRFVETMDTYFGNVCELDIIFNFSKVYDILNEMIMCDGSIAESSRKEVLHHVTVMDTM 145
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP2S_SCHPO (AP-2 complex subunit sigma OS=Schizosaccharomyces pombe GN=aps2 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.661e-36 Identity = 73/142 (51.41%), Postives = 100/142 (70.42%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKL-CNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSL 536 MI F+L+ +R GK RL+K+Y P+ E+ ++ + +I R K NF+EW K+VY+RYA LYFC C+D DN+L ILE+IH +VEILD +FG+VCELDLIFNF+K ILDEI++ GE+ ES+KK+V I A + L Sbjct: 1 MIQFILIQNRHGKNRLSKYYVPFDDDEKVRLKARIHQLISQRNQKFQANFLEWENSKLVYRRYAGLYFCFCVDSTDNDLAILEMIHFFVEILDSFFGNVCELDLIFNFYKVSAILDEIILGGEIGESNKKSVLERIEALEKL 142
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP3S2_BOVIN (AP-3 complex subunit sigma-2 OS=Bos taurus GN=AP3S2 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.912e-26 Identity = 57/173 (32.95%), Postives = 105/173 (60.69%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRG------YKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK*DVPSM 614 MI +L+ + GK RL ++Y + ++ + +++RE ++L R +CNF+E YK++Y+ YA+LYF C+D ++EL IL++I +VE LD+ F +VCELDLIF+ K +YIL E+++ G + E++ + I AQ+ L ++ +++ + ++ ++P M Sbjct: 1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQIEAQNRLEKSEGGLSAAPARAVSAVKNINLPEM 173
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP3S2_PONAB (AP-3 complex subunit sigma-2 OS=Pongo abelii GN=AP3S2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.562e-26 Identity = 56/173 (32.37%), Postives = 105/173 (60.69%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRG------YKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK*DVPSM 614 MI +L+ + GK RL ++Y + ++ + +++RE ++L R +CNF+E YK++Y+ YA+LYF C+D ++EL IL++I +VE LD+ F +VCELDLIF+ K +YIL E+++ G + E++ + I AQ+ L ++ +++ + ++ ++P + Sbjct: 1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQIEAQNRLEKSEGGLSAAPARAVSAVKNINLPEI 173
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP3S2_MOUSE (AP-3 complex subunit sigma-2 OS=Mus musculus GN=Ap3s2 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.562e-26 Identity = 56/173 (32.37%), Postives = 105/173 (60.69%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRG------YKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK*DVPSM 614 MI +L+ + GK RL ++Y + ++ + +++RE ++L R +CNF+E YK++Y+ YA+LYF C+D ++EL IL++I +VE LD+ F +VCELDLIF+ K +YIL E+++ G + E++ + I AQ+ L ++ +++ + ++ ++P + Sbjct: 1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQIEAQNRLEKSEGGLSAAPARAVSAVKNINLPEI 173
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP3S2_HUMAN (AP-3 complex subunit sigma-2 OS=Homo sapiens GN=AP3S2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.562e-26 Identity = 56/173 (32.37%), Postives = 105/173 (60.69%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRG------YKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK*DVPSM 614 MI +L+ + GK RL ++Y + ++ + +++RE ++L R +CNF+E YK++Y+ YA+LYF C+D ++EL IL++I +VE LD+ F +VCELDLIF+ K +YIL E+++ G + E++ + I AQ+ L ++ +++ + ++ ++P + Sbjct: 1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQIEAQNRLEKSEGGLSAAPARAVSAVKNINLPEI 173
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP3S_SCHPO (AP-3 complex subunit sigma OS=Schizosaccharomyces pombe GN=aps3 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.618e-25 Identity = 58/161 (36.02%), Postives = 102/161 (63.35%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWR----GYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIA 584 MI+ V + + +GK RLTK+Y+P + + K+I ++ + TR P CNF+E +++Y++YA+LYF +D+ ++EL IL++I +VE LDR F +VCELDL+F F + + IL E++ G + E++ + ++AAQ+ + +T + A SN ++ Sbjct: 1 MIYAVFIFNNKGKPRLTKFYTPIDESIQQKLIGDIYAAVSTRPPTACNFLESNLIAGKNRIIYRQYATLYFVFVVDEGESELGILDLIQVFVEALDRCFNNVCELDLVFKFQEIHAILAEVVSGGLVLETNLNEI--VLAAQNQMPKTKRSNAMPFSNTLS 159
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP3S_DICDI (AP-3 complex subunit sigma OS=Dictyostelium discoideum GN=ap3s1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.761e-25 Identity = 56/164 (34.15%), Postives = 101/164 (61.59%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEW--------RGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNII 581 MI +L+I+ GK RL K+Y Y+++++ ++IREL ++ R + CNF+E + K++Y+ YA+L+F C+D ++EL I+++I +VE LD+ F +VCELDLIF+ K +YILDE+++ G + E++ + Q+ L + S ++ ++ Sbjct: 1 MIKSILIINNHGKPRLIKFYEHYSEEKQQQIIRELFLLVSKRTERSCNFLEIGNNSNIFDKDTKIIYRHYATLFFIFCVDSSESELSIIDLIQTFVESLDKCFENVCELDLIFHIDKVHYILDEMVMGGLVLETNPTIIFSNYEIQNKLEKAENPLLSGLAGVM 164 The following BLAST results are available for this feature:
BLAST of DY258008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258008 ID=DY258008; Name=DY258008; organism=Citrus clementina; type=EST; length=713bpback to top |