DY258008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP3S1_MOUSE (AP-3 complex subunit sigma-1 OS=Mus musculus GN=Ap3s1 PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.605e-25 Identity = 58/173 (33.53%), Postives = 103/173 (59.54%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEW------RGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK*DVPSM 614 MI +L+ + GK RL+K+Y PY++ + ++IRE ++ R +CNF+E K++Y+ YA+LYF C+D ++EL IL++I +VE LD+ F +VCELDLIF+ K + IL E+++ G + E++ + I AQ+ L ++ A + + ++ ++P + Sbjct: 1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQIDAQNKLEKSEAGLAGAPARAVSAVKNMNLPEI 173
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP3S1_HUMAN (AP-3 complex subunit sigma-1 OS=Homo sapiens GN=AP3S1 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.605e-25 Identity = 58/173 (33.53%), Postives = 103/173 (59.54%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEW------RGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK*DVPSM 614 MI +L+ + GK RL+K+Y PY++ + ++IRE ++ R +CNF+E K++Y+ YA+LYF C+D ++EL IL++I +VE LD+ F +VCELDLIF+ K + IL E+++ G + E++ + I AQ+ L ++ A + + ++ ++P + Sbjct: 1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQIDAQNKLEKSEAGLAGAPARAVSAVKNMNLPEI 173
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP3S1_BOVIN (AP-3 complex subunit sigma-1 OS=Bos taurus GN=AP3S1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.605e-25 Identity = 58/173 (33.53%), Postives = 103/173 (59.54%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEW------RGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK*DVPSM 614 MI +L+ + GK RL+K+Y PY++ + ++IRE ++ R +CNF+E K++Y+ YA+LYF C+D ++EL IL++I +VE LD+ F +VCELDLIF+ K + IL E+++ G + E++ + I AQ+ L ++ A + + ++ ++P + Sbjct: 1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQIDAQNKLEKSEAGLAGAPARAVSAVKNMNLPEI 173
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP4S1_MOUSE (AP-4 complex subunit sigma-1 OS=Mus musculus GN=Ap4s1 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.032e-25 Identity = 51/144 (35.42%), Postives = 96/144 (66.67%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVET 545 MI F L++++QG+ RL+K+Y +R+ + E+S L+R + C+F+E++ +K++Y++YA+L+ + ++ +NE+ I E IH++VE+LD YF V ELD++FN K + ILDE+++ G + E+++ + + D L E+ Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRALLETEVSKSCLSRSSEQCSFIEYKDFKLIYRQYAALFVVVGVNDTENEMAIYEFIHNFVEVLDGYFSRVSELDIMFNLDKVHIILDEMVLNGCIVETNRARILAPLLILDKLSES 144
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP4S1_HUMAN (AP-4 complex subunit sigma-1 OS=Homo sapiens GN=AP4S1 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.986e-24 Identity = 49/144 (34.03%), Postives = 95/144 (65.97%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVET 545 MI F L++++QG+ RL+K+Y +R+ + E+ L+R + C+F+E++ +K++Y++YA+L+ + ++ +NE+ I E IH++VE+LD YF V ELD++FN K + ILDE+++ G + E+++ + + D + E+ Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEMVLNGCIVETNRARILAPLLILDKMSES 144
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP2S_YEAST (AP-2 complex subunit sigma OS=Saccharomyces cerevisiae GN=APS2 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.986e-24 Identity = 61/144 (42.36%), Postives = 94/144 (65.28%), Query Frame = 3 Query: 117 IHFVLLISRQGKVRLTKWYSPYTQK-ERSK-VIRELSGVILTRGPK-LCNFVEWR-GYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSL 536 + F+L ++QG VRL +W+ ++ +RS+ I ++ +I +R K NFVE+ K++Y+RYA LYF M +D D+E L IH +VE+LD +FG+VCELD++FNF+K Y I+DE+ I GE+QE SK + ++ D L Sbjct: 3 VQFILCFNKQGVVRLVRWFDVHSSDPQRSQDAIAQIYRLISSRDHKHQSNFVEFSDSTKLIYRRYAGLYFVMGVDLLDDEPIYLCHIHLFVEVLDAFFGNVCELDIVFNFYKVYMIMDEMFIGGEIQEISKDMLLERLSILDRL 146
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP4S1_BOVIN (AP-4 complex subunit sigma-1 OS=Bos taurus GN=AP4S1 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.515e-23 Identity = 50/136 (36.76%), Postives = 94/136 (69.12%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIA 521 MI F L++++QG+ RL+K+Y +R+ + E+ L+R + C+F+E++ +K++Y++YA+L+ + ++ +NE+ I E IH++VE+LD YF V ELD++FN K + ILDE+++ G + E+++ AR++A Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVEINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDDYFSRVSELDIMFNLDKVHIILDEMVLNGCIVETNR---ARILA 133
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP4S_DICDI (AP-4 complex subunit sigma OS=Dictyostelium discoideum GN=ap4s1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.375e-23 Identity = 54/134 (40.30%), Postives = 90/134 (67.16%), Query Frame = 3 Query: 117 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLI 518 I + LL++ +GK RL+++Y +ER + E+ L+R C+FVE++ YKV+Y++YA+L+F + +D +NEL ILE+IH+YVEILD F +V ++FN KA++ILDE++ G++ E SK+ + + Sbjct: 3 IKYFLLVNIRGKTRLSQYYESIPFEERPAMESEIIRKCLSRTEIQCSFVEYKDYKVIYRKYATLFFIVGVDTTENELAILELIHNYVEILDSCFDNV----IMFNLDKAHFILDEMVSNGDIVEISKQHILEFV 132
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP3S_YEAST (AP-3 complex subunit sigma OS=Saccharomyces cerevisiae GN=APS3 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.342e-16 Identity = 55/173 (31.79%), Postives = 94/173 (54.34%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVILTRG-----------PKLC-------NFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNI 578 MIH VL+ +++ + RL K+Y+P ++ ++ ++ +I R P L + V +++YK YA+LYF +D +++EL IL++I +VE LDR F V ELDLIFN+ +L+EI+ G + E++ V R++A+ D L + A+ S I + Sbjct: 1 MIHAVLIFNKKCQPRLVKFYTPVDLPKQKLLLEQVYELISQRNSDFQSSFLVTPPSLLLSNENNNDEVNNEDIQIIYKNYATLYFTFIVDDQESELAILDLIQTFVESLDRCFTEVNELDLIFNWQTLESVLEEIVQGGMVIETN---VNRIVASVDELNKAAESTDSKIGRL 170
BLAST of DY258008 vs. ExPASy Swiss-Prot
Match: AP3S_ASHGO (AP-3 complex subunit sigma OS=Ashbya gossypii GN=APS3 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.995e-16 Identity = 51/167 (30.54%), Postives = 91/167 (54.49%), Query Frame = 3 Query: 114 MIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGVI------------------LTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEILEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVETAKEQA 560 MIH VL+ +++ + RL K+Y+P ++ ++ ++ +I L+ G + N +++YK YA+LYF +D +++EL IL++I +VE LDR F V ELDLIFN+ +L+EI+ G + E++ V +++ D L T+ ++A Sbjct: 1 MIHAVLIFNKKCQPRLVKYYTPVDLPKQKLLLEQVYELISQRNSSIQSSFLITPPSLLSSGSETIN----EDIQIIYKNYATLYFTFIVDDQESELAILDLIQTFVEALDRCFAEVNELDLIFNWQTLESVLEEIIQGGMVIETN---VKKIVETVDELNRTSNQEA 160 The following BLAST results are available for this feature:
BLAST of DY258008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258008 ID=DY258008; Name=DY258008; organism=Citrus clementina; type=EST; length=713bpback to top |