DY258027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258027 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 3.336e-22 Identity = 66/231 (28.57%), Postives = 109/231 (47.19%), Query Frame = 3 Query: 60 TFKSATVAVVGEGFLARDITFQNTA----GPSKH-QAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 737 T SA++ ++ + F+A +I +NTA G +K QA+++R+ + +AFYNC +QDT+ + FF +C + GT DFIFG+ ++ +H ++ A + +G ++ T YLGR W + + V + +T +++P GW E T+FYGE++ SG G+ + RV F EA F +I GS WL Sbjct: 139 TVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGI---RVIAAHAGKSAEEKSGYSFVHCKVTGTGG--------GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPGSHKAKRVP---FTQDIDDKEANCFLSLGYIQGSKWL 355
BLAST of DY258027 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.357e-22 Identity = 66/231 (28.57%), Postives = 109/231 (47.19%), Query Frame = 3 Query: 60 TFKSATVAVVGEGFLARDITFQNTA----GPSKH-QAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 737 T SA++ ++ + F+A +I +NTA G +K QA+++R+ + +AFYNC +QDT+ + FF +C + GT DFIFG+ ++ +H ++ A + +G ++ T YLGR W + + V + +T +++P GW E T+FYGE++ SG G+ + RV F EA F +I GS WL Sbjct: 139 TVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGI---RVIAAHAGKSAEEKSGYSFVHCKVTGTGG--------GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPGSHKAKRVP---FTQDIDDKEANRFLSLGYIQGSKWL 355
BLAST of DY258027 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 9.707e-22 Identity = 68/231 (29.44%), Postives = 112/231 (48.48%), Query Frame = 3 Query: 60 TFKSATVAVVGEGFLARDITFQNTA----GPSKH-QAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 737 T SAT+ V+ + F+A +I +N+A G K QA+++R+ + +AFYNC YQDT+ + FF +C I GT DFIFG+ ++ ++ ++TA + +G ++ T YLGR W + + V + ++ +++P+GW E T+FYGE++ +G G+ RVK + EA+ F +I GSSWL Sbjct: 116 TVDSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVVGDGI---RVITAHAGKSAAEKSGYSFVHCKVTGTGT--------GIYLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREAGRDKTVFYGEYKCTGTGSHKEKRVK---YTQDIDDIEAKYFISLGYIQGSSWL 332
BLAST of DY258027 vs. ExPASy Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.312e-18 Identity = 72/249 (28.92%), Postives = 105/249 (42.17%), Query Frame = 3 Query: 48 DGSTTFKSATVAVVGEGFLARDITFQNTAG--PSKHQ----AVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKN---MVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLG 767 D T SAT + + ITF+NT P+ + AVA R+ D + + QDTL+ R ++ C+I+G +DFIFG ++ + C ++ N +TA R P+ G V V G T LGR W +R + +S ++D++ P GW W L + E +GAGA TS RV W S +E F SFI W+ + FP G Sbjct: 101 DHQATDISATFTAFADDIVISGITFKNTYNIVPNNKREIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDCT---------VTGVGKTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGADTSQRVPW---LKKLSLSEVDGFASVSFIDQDGWI--SRFPIEGG 335
BLAST of DY258027 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 2.238e-18 Identity = 49/108 (45.37%), Postives = 62/108 (57.41%), Query Frame = 3 Query: 6 GRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI 329 G+ TI T + + + TF +AT A G+GF+ D+ F+NT P K V LRV D+S Y C + YQD LY H NRQ + + TVDFI GNAAAV Q C I Sbjct: 134 GQDSTIITFNLSSSNSKRTFNTATFASNGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFICGNAAAVFQFCQI 241
BLAST of DY258027 vs. ExPASy Swiss-Prot
Match: PMEA_ERWCH (Pectinesterase A OS=Erwinia chrysanthemi GN=pemA PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.111e-17 Identity = 84/262 (32.06%), Postives = 120/262 (45.80%), Query Frame = 3 Query: 48 DGST--TFKSATVAVVGEGFLARDITFQNT----AGPSKH----------QAVALRV--GADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHAR---KPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTY---LGRPW--------------KEYSRTVIMQSSITDLIHPAGWHEWDGNFAL-NTLFYG-------EHQNSGAGAGTSGRVKWKGFRVITSATEAQ 695 DGS T S+T+ + + F A+ +T +N A +K QAVAL V D + F + ++ YQDTLYV R FF +C I+GTVDFIFG+ A+ NCD+ +R SG + T+ NQ G+VI SR+ SD S P LGRPW +TV + +S+ + H GW + G NT+++ E+++ GAGA S K R +T A A+ Sbjct: 103 DGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESD------SVPAKSYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDN--HIYGWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGAAVS-----KDRRQLTDAQAAE 351
BLAST of DY258027 vs. ExPASy Swiss-Prot
Match: PMEA_DICD3 (Pectinesterase A OS=Dickeya dadantii (strain 3937) GN=pemA PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.894e-17 Identity = 84/262 (32.06%), Postives = 120/262 (45.80%), Query Frame = 3 Query: 48 DGST--TFKSATVAVVGEGFLARDITFQNT----AGPSKH----------QAVALRV--GADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHAR---KPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTY---LGRPW--------------KEYSRTVIMQSSITDLIHPAGWHEWDGNFAL-NTLFYG-------EHQNSGAGAGTSGRVKWKGFRVITSATEAQ 695 DGS T S+T+ + + F A+ +T +N A +K QAVAL V D + F + ++ YQDTLYV R FF +C I+GTVDFIFG+ A+ NCD+ +R SG + T+ NQ G+VI SR+ SD S P LGRPW +TV + +S+ + H GW + G NT+++ E+++ GAGA S K R +T A A+ Sbjct: 103 DGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESD------SVPAKSYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDN--HIYGWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGATVS-----KDRRQLTDAQAAE 351
BLAST of DY258027 vs. ExPASy Swiss-Prot
Match: PME1_RALSO (Pectinesterase OS=Ralstonia solanacearum GN=pme PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.973e-12 Identity = 72/246 (29.27%), Postives = 98/246 (39.84%), Query Frame = 3 Query: 3 GGRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQN-----TAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSN------RQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK--NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKE--------------YSRTVIMQSSITDLIH--------PAGWHEWDGNFALNTLFYGEHQNSGAGAG 635 G +T S N G T +SAT V F AR++TF+N T + AVAL V D + N ++ QDTL+V + R +F N I G DFIFG AV C I G K + + A T P G + S AT + + +LGR W + + VI SS+ LI AG N A + + E+ N+GAG+G Sbjct: 157 GAKTNPCMGTSSNATVG--TLRSATAMVRASDFHARNLTFKNSYVEGTYADNNQSAVALAVRGDKAILENVSVIGNQDTLFVGATSTTTVIRAYFKNSFIQGDTDFIFGAGTAVFHGCTIQYTAARLGAKAASYIFAPS-TAPGNPYGFLAINSTFNATGN----PPNNSLHLGRAWDQSVSGTSAYINGSSPNGQVVIRDSSLGALIRLADPWGPSTAGRPYCSANCAYSANRFFEYNNTGAGSG 395
BLAST of DY258027 vs. ExPASy Swiss-Prot
Match: PME2_RALSO (Pectinesterase OS=Ralstonia solanacearum GN=pme PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11 Identity = 69/245 (28.16%), Postives = 95/245 (38.78%), Query Frame = 3 Query: 3 GGRTRTIFTGSRNVVDGSTTFKSATVAVVGEGFLARDITFQN-----TAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSN------RQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK-NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKE--------------YSRTVIMQSSITDLIH--------PAGWHEWDGNFALNTLFYGEHQNSGAGAG 635 G +T S N G T +SAT V F AR++TF+N T + AVAL V D + N ++ QDTLY+ + R +F N I G DFIFG AV C I G + T P+ G + S AT + + T+LGR W + + VI SS+ I AG A + + E+ N+GAG+G Sbjct: 157 GAKTNPCMGTSSNATVG--TVRSATAMVRASNFNARNLTFKNSYVEGTFADNNQSAVALAVRGDKAILENVSVIGNQDTLYLGATNNTMVIRAYFKNSFIQGDTDFIFGAGTAVFHGCTIQYTAARLGARATSYVFAPSTAPDNPHGFLAINSTFNATGN----ASNNSTHLGRAWDQGVSGTSAYINGSSPNGQVVIRDSSLGAHIRLADPWGPSTAGRPYCSSKCAYSANRFFEYNNTGAGSG 395 The following BLAST results are available for this feature:
BLAST of DY258027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258027 ID=DY258027; Name=DY258027; organism=Citrus clementina; type=EST; length=924bpback to top |