DY258031

Overview
NameDY258031
Unique NameDY258031
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1285
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.034e-13
Identity = 63/240 (26.25%), Postives = 105/240 (43.75%), Query Frame = 2
Query:  140 QQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKDMCD 790
            Q A  + GEV V++ ++ +CHTD + W G  P +   P + GHE AG + ++G+G +T ++ G +V I      C +C+ C+ G    C + +             S +S++G          TF QY V +   V  I    PL++   + C   T   A+ N +K   G                    +A   R+I ID    K  +  ++G  +FV+ +DH  P +  + I D+ D
Sbjct:   30 QVAPPQAGEVRVKILFTALCHTDHYTWSGKDP-EGLFPCILGHEAAGIVESVGEG-VTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQ--QVIVDLTD 264          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.034e-13
Identity = 63/240 (26.25%), Postives = 105/240 (43.75%), Query Frame = 2
Query:  140 QQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKDMCD 790
            Q A  + GEV V++ ++ +CHTD + W G  P +   P + GHE AG + ++G+G +T ++ G +V I      C +C+ C+ G    C + +             S +S++G          TF QY V +   V  I    PL++   + C   T   A+ N +K   G                    +A   R+I ID    K  +  ++G  +FV+ +DH  P +  + I D+ D
Sbjct:   30 QVAPPQAGEVRVKILFTALCHTDHYTWSGKDP-EGLFPCILGHEAAGIVESVGEG-VTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQ--QVIVDLTD 264          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 2.034e-13
Identity = 65/234 (27.78%), Postives = 97/234 (41.45%), Query Frame = 2
Query:  155 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC----------------SQAQCSGYSV-----DGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKDMCD 790
            K  EV +++  +GVCHTD     G  P +   P+V GHEGAG + ++G+G +TN K G +V I      C +C+ C+ G    C                S+  C G  +       TF +Y V     +T I +  PLE+   + C   T Y A LN +K   G                     A   ++  ID   DK +L   +G   FV+ +D +D       + D+ D
Sbjct:   34 KAHEVRIKITATGVCHTDAFTLSGADP-EGLFPVVLGHEGAGIVESVGEG-VTNFKAGDHV-IALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVMPEGTSRLSCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNTAKVEAGSTCAVWGLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKDVADKGSIQNYLIDLTD 264          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH6_PERMA (Alcohol dehydrogenase 6 OS=Peromyscus maniculatus GN=ADH6 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.034e-13
Identity = 63/221 (28.51%), Postives = 91/221 (41.18%), Query Frame = 2
Query:  155 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSG--------------------YSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNS-KARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 754
            K  EV V++  +G+C TD+ +      A P  P++ GHEG G + ++G+G  T +K G  V I  L   C +C  C       C + + SG                    Y   GTF +Y V     V  + +   LE+A  I C   T + A +NS K  PG                    AA   R+IA+DT  DK     + GA + +D +D   P
Sbjct:   33 KGKEVRVKMVAAGICGTDIKSLDNKKLA-PFCPIIMGHEGTGIVESVGEGVST-VKTGDKVIILCLPQ-CGECNTCLNSKNNICKEVRLSGTHLTSEGNSRITCKGKTTYQYITTGTFSEYIVIKEISVAKVDEDALLEKACIIGCGFATGFGAAINSAKVSPGSTCAVFGLGGVGLSVIMGCKAAGAARIIAVDTNKDKFAKAKTVGATECIDPQDFEKP 250          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 2.656e-13
Identity = 64/222 (28.83%), Postives = 92/222 (41.44%), Query Frame = 2
Query:  155 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC----------------SQAQCSG-----YSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 754
            K  EV +++  + VCHTD +   G  P +   P++ GHEGAG + ++G+G +TNLK G  V I      C +C+ C       C                S+  C G     Y    TF +Y V     V  I    PL++   + C   T Y A LN +K  PG                    AA   R+IA+D   DK      +GA + ++ +D S P
Sbjct:   31 KAHEVRIKIFATAVCHTDAYTLSGADP-EGCFPVILGHEGAGIVESVGEG-VTNLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGGVGLAAIMGCKAAGASRIIAVDINKDKFARAKEFGATECINPQDFSKP 249          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: TDH_PYRAB (Probable L-threonine 3-dehydrogenase OS=Pyrococcus abyssi GN=tdh PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.469e-13
Identity = 66/218 (30.28%), Postives = 100/218 (45.87%), Query Frame = 2
Query:  158 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRL--PLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAA---PILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMG-LRVIAIDTGDDKRKLCASYGADKFVD-FEDHSDPEKFIKAIKDMCD 790
            PGEVL++V  + +C TDLH ++ +  A+ R+  P + GHE AG +V +G G +  ++VG  V ++     C  C  CR G    C   +  G   DG F +YAV  A++V   P  +P E A    P+  A  TV    ++ K+                      A A G   VI  +  D +R+L    GAD  ++ FE     E  +K + D+ D
Sbjct:   29 PGEVLIKVIATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPG-VEGIEVGDYVSVETHI-VCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNVWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS------VLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE-----EDVVKEVMDITD 233          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.469e-13
Identity = 60/219 (27.40%), Postives = 92/219 (42.01%), Query Frame = 2
Query:  164 EVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC----------------SQAQCSGYSV-----DGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNS-KARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 754
            EV +++  +GVCHTD +   G  P +   P++ GHEGAG + ++G+G +T  K G  V I      C +C+ C+      C                S+  C G  V       TF +Y V     +  + +  P+++   + C   T Y A LN+ K  PG                     A   R+I ID    K +    +GA +FV+ +DHS P
Sbjct:   36 EVRIKLFATGVCHTDAYTLSGSDP-EGLFPVILGHEGAGTVESVGEG-VTKFKPGDTV-IPLYVPQCGECKFCKNPKTNLCQKIRITQGQGLLPDKTSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGATEFVNPKDHSKP 251          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: TDH_PYRHO (Probable L-threonine 3-dehydrogenase OS=Pyrococcus horikoshii GN=tdh PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.530e-13
Identity = 66/218 (30.28%), Postives = 100/218 (45.87%), Query Frame = 2
Query:  158 PGEVLVRVDYSGVCHTDLHAWKGDWPAKPRL--PLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAA---PILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMG-LRVIAIDTGDDKRKLCASYGADKFVD-FEDHSDPEKFIKAIKDMCD 790
            PGEVL++V  + +C TDLH ++ +  A+ R+  P + GHE AG +V IG G +  ++VG  V ++     C  C  CR G    C   +  G   DG F +YAV  A+++   P  +P E A    P+  A  TV    ++ K+                      A A G   VI  +  D +R+L    GAD  ++ FE     E  +K + D+ D
Sbjct:   29 PGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPG-VEGIEVGDYVSVETHI-VCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS------VLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE-----EDVVKEVMDITD 233          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH1_GADCA (Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.530e-13
Identity = 63/220 (28.64%), Postives = 93/220 (42.27%), Query Frame = 2
Query:  164 EVLVRVDYSGVCHTDL-HAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC----------------SQAQCSGYSV-----DGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNS-KARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 754
            E+ +++  +GVCHTDL H ++G    K   P+V GHEGAG + ++G G +T  + G+ V I      C +C  C+      C                ++  C G  V       TF QY V     V  I    PL+    + C   T + A +N+ K  PG                    +A   R+IA+D   DK +    +GA  FV+  DHS+P
Sbjct:   35 EIRIKIIATGVCHTDLYHLFEGKH--KDGFPVVLGHEGAGIVESVGPG-VTEFQPGEKV-IPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEP 250          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: TDH_XANOR (L-threonine 3-dehydrogenase OS=Xanthomonas oryzae pv. oryzae GN=tdh PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 5.917e-13
Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 2
Query:   80 ACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGD-WPAKPRLP-LVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAA 520
            A V ++ N  I +++  PVP      P EVL++++ + +C TDLH +  D W  +   P L  GHE  G +  +G   +T  +VGQ V  +     C  C NCR G    C      G +V+G F +Y V  A ++ PIPD +P E AA
Sbjct:    3 ALVKRETNKGI-WLEQVPVPTPG---PNEVLIKLEKTAICGTDLHIYLWDEWSQRTIKPGLTIGHEFVGRVAELGSA-VTGYQVGQRVSAEGHI-VCGHCRNCRGGRPHLCPNTMGIGVNVNGAFAEYMVMPASNLWPIPDQIPSELAA 145          
The following BLAST results are available for this feature:
BLAST of DY258031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
ADHX_ORYSJ2.034e-1326.25Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI2.034e-1326.25Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_DROME2.034e-1327.78Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADH6_PERMA2.034e-1328.51Alcohol dehydrogenase 6 OS=Peromyscus maniculatus ... [more]
ADHX_RABIT2.656e-1328.83Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
TDH_PYRAB3.469e-1330.28Probable L-threonine 3-dehydrogenase OS=Pyrococcus... [more]
ADHX_SPAAU3.469e-1327.40Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
TDH_PYRHO4.530e-1330.28Probable L-threonine 3-dehydrogenase OS=Pyrococcus... [more]
ADH1_GADCA4.530e-1328.64Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV... [more]
TDH_XANOR5.917e-1334.90L-threonine 3-dehydrogenase OS=Xanthomonas oryzae ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH02ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258031 ID=DY258031; Name=DY258031; organism=Citrus clementina; type=EST; length=1285bp
GACTCTCTCTTTCTCTCTTCACAACTCTACAGCAATCAAAACTATGTCAC
AAACCCTCGATTACCCCAAGACCGGCGCAGCCTGCGTCTTCAAAGACCAC
AATGCCAACATTGATTTCGTCAAGGATCACCCAGTCCCCCAACAGGCTGA
CCTCAAGCCTGGAGAGGTCCTCGTTCGTGTCGACTACTCTGGTGTATGCC
ACACCGATCTTCACGCTTGGAAAGGTGACTGGCCGGCGAAGCCTCGTCTA
CCCCTCGTAGGTGGTCATGAGGGTGCAGGTCCAATCGTGGCCATCGGAGA
CGGTACATTGACTAACCTCAAAGTTGGTCAAAACGTCGGAATCAAATGGC
TCGCCGACTCGTGTCTCGACTGCGAGAACTGTCGTGAAGGTATCGAGGCT
ACATGTTCTCAGGCTCAATGCTCCGGATACTCTGTCGACGGTACTTTCCA
ACAATACGCAGTATCTTACGCTCGTCACGTCACCCCTATTCCCGACGGAT
TACCCTTGGAACAAGCCGCTCCTATCTTGTGCGCTGGAGTTACTGTCTAT
CGTGCTCTCTTGAACTCGAAAGCGAGACCTGGACAATATGTCGCCATTGT
GGGTGCTGGAGGAGGTCTAGGACATCTAGCTGTGCAATACGCTGCCGCCA
TGGGACTTCGAGTCATCGCCATCGACACTGGTGACGACAAGAGGAAACTT
TGTGCCTCATACGGTGCCGACAAATTCGTCGATTTCGAGGATCACTCGGA
TCCCGAGAAGTTTATCAAAGCGATCAAGGATATGTGCGATGGCGTAGGAC
CTCACGCTGCTGTAGTTGCGGCAGCTGGTGCCGCCGCTTACGAGCAGGCT
CTCGAGTAATTCGTCCAACCGGTACTCTCGTTGCCGTCGGGTCTCCCCCC
AACACTTCCATAAAGGCCAACGTCTTCTTCCCCGTCTTCTACTCCAAGCG
CAAATCGGGGCCTAACTTGGGAACAGGCAAGATGCCCGTGGAAGCTCCCA
ATTTCCCTGCCCCGGAAAAGGTACCCCCCCCAAATCGAGTTTTGCCCCCT
TGGAAAATTTTTCCCGAAATTTTAAAAACCCCAGGGGAAAAAGGGGCAAA
ATCCCCCGGGGAGAATTTTTTTCCCAAAAAATTTTAAAACCCTTCTCCCC
CCCCCTCCCCCCCCTCCCCCCCCCCTCTTCCCCCCTTTTTTGGGGTTTTT
AACCTTTTTCCCCCCCGGGGGCCCCCCCCTTTCCCGGGGGGCTCGGGGGG
GGGGGCCCCCCCGAGGAAAAAGGAGGGGGGAGAAA
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