DY258031

Overview
NameDY258031
Unique NameDY258031
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1285
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH_STAAR (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=adh PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.336e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   77 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 781
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH_STAAN (Alcohol dehydrogenase OS=Staphylococcus aureus (strain N315) GN=adh PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.336e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   77 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 781
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH_STAAM (Alcohol dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=adh PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.336e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   77 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 781
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH_STAAC (Alcohol dehydrogenase OS=Staphylococcus aureus (strain COL) GN=adh PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.336e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   77 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 781
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH_STAAB (Alcohol dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=adh PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.336e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   77 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 781
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH_STAA8 (Alcohol dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325) GN=adh PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.336e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   77 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 781
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH_STAA3 (Alcohol dehydrogenase OS=Staphylococcus aureus (strain USA300) GN=adh PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.336e-32
Identity = 80/235 (34.04%), Postives = 116/235 (49.36%), Query Frame = 2
Query:   77 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKD 781
            AA V KDH  +I+  K         LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + +  + +LK+G  V I W+ +SC  CE C  G E  C   + +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S  +PGQ+                    MG +++A D  DDK       GAD  ++ +D  DP   +  + D
Sbjct:    3 AAVVTKDHKVSIEDKKLRA------LKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAED-VESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKD-VDPVAEVMKLTD 227          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH_STAEQ (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adh PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.656e-31
Identity = 77/219 (35.16%), Postives = 108/219 (49.32%), Query Frame = 2
Query:   77 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVD 733
            AA V KDH  +I+        +  +LKPGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ + D  + +LKVG  V I W+  +C +CE C  G E  C     +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S   PGQ+                    MG +V+A D  DDK       GAD  ++
Sbjct:    3 AAVVTKDHRVSIE------EKRLRELKPGEALVKTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGRVIEVADN-VDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVLNAGYTVDGAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIEPGQWLGVFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFAKELGADAIIN 212          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH1_ZYMMO (Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=adhA PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 2.770e-31
Identity = 78/231 (33.77%), Postives = 112/231 (48.48%), Query Frame = 2
Query:   77 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIK 769
            AA + KDH   +   K  P      LK GE L+ ++Y GVCHTDLH   GD+  +     + GHEG G +  +G+G +T+LKVG    + W    C  CE C  G E  C   + +GY+VDG   +  +  A +   +PDGL    A+ I CAGVT Y+A+  S+ +PGQ+                       +VIAID  D++       GAD  ++   + D  K I+
Sbjct:    3 AAVITKDHTIEVKDTKLRP------LKYGEALLEMEYCGVCHTDLHVKNGDFGDETGR--ITGHEGIGIVKQVGEG-VTSLKVGDRASVAWFFKGCGHCEYCVSGNETLCRNVENAGYTVDGAMAEECIVVADYSVKVPDGLDPAVASSITCAGVTTYKAVKVSQIQPGQWLAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDEQLAFAKELGADMVIN-PKNEDAAKIIQ 223          

HSP 2 Score: 24.2534 bits (51), Expect = 2.770e-31
Identity = 22/59 (37.29%), Postives = 27/59 (45.76%), Query Frame = 1
Query:  859 IRPTGTLVAVGSPPNTSIKANVFFP--VFYSKRKSGPNLGTGKMPVEAPNFPAPEKVPP 1029
            IR  G +VAVG PP    K ++  P  V       G  +GT +   EA  F A  KV P
Sbjct:  249 IRAGGRVVAVGLPPE---KMDLSIPRLVLDGIEVLGSLVGTREDLKEAFQFAAEGKVKP 304          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH_STAES (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=adh PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.824e-31
Identity = 77/219 (35.16%), Postives = 108/219 (49.32%), Query Frame = 2
Query:   77 AACVFKDHNANIDFVKDHPVPQQADLKPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQCSGYSVDGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVD 733
            AA V KDH  +I+        +  +L+PGE LV+ +Y GVCHTDLH    D+     + L  GHEG G ++ I D  + +LKVG  V I W+  +C +CE C  G E  C     +GY+VDG   +  +  A +   +P+ L    A+ I CAGVT Y+A+  S   PGQ+                    MG +V+A D  DDK       GAD  ++
Sbjct:    3 AAVVTKDHRVSIE------EKRLRELRPGEALVKTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGRVIKIADN-VDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVLNAGYTVDGAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIEPGQWLGVFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFAKELGADAIIN 212          
The following BLAST results are available for this feature:
BLAST of DY258031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
ADH_STAAR3.336e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAN3.336e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAM3.336e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAC3.336e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAB3.336e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAA83.336e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAA33.336e-3234.04Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAEQ1.656e-3135.16Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH1_ZYMMO2.770e-3133.77Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=ad... [more]
ADH_STAES2.824e-3135.16Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH02ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258031 ID=DY258031; Name=DY258031; organism=Citrus clementina; type=EST; length=1285bp
GACTCTCTCTTTCTCTCTTCACAACTCTACAGCAATCAAAACTATGTCAC
AAACCCTCGATTACCCCAAGACCGGCGCAGCCTGCGTCTTCAAAGACCAC
AATGCCAACATTGATTTCGTCAAGGATCACCCAGTCCCCCAACAGGCTGA
CCTCAAGCCTGGAGAGGTCCTCGTTCGTGTCGACTACTCTGGTGTATGCC
ACACCGATCTTCACGCTTGGAAAGGTGACTGGCCGGCGAAGCCTCGTCTA
CCCCTCGTAGGTGGTCATGAGGGTGCAGGTCCAATCGTGGCCATCGGAGA
CGGTACATTGACTAACCTCAAAGTTGGTCAAAACGTCGGAATCAAATGGC
TCGCCGACTCGTGTCTCGACTGCGAGAACTGTCGTGAAGGTATCGAGGCT
ACATGTTCTCAGGCTCAATGCTCCGGATACTCTGTCGACGGTACTTTCCA
ACAATACGCAGTATCTTACGCTCGTCACGTCACCCCTATTCCCGACGGAT
TACCCTTGGAACAAGCCGCTCCTATCTTGTGCGCTGGAGTTACTGTCTAT
CGTGCTCTCTTGAACTCGAAAGCGAGACCTGGACAATATGTCGCCATTGT
GGGTGCTGGAGGAGGTCTAGGACATCTAGCTGTGCAATACGCTGCCGCCA
TGGGACTTCGAGTCATCGCCATCGACACTGGTGACGACAAGAGGAAACTT
TGTGCCTCATACGGTGCCGACAAATTCGTCGATTTCGAGGATCACTCGGA
TCCCGAGAAGTTTATCAAAGCGATCAAGGATATGTGCGATGGCGTAGGAC
CTCACGCTGCTGTAGTTGCGGCAGCTGGTGCCGCCGCTTACGAGCAGGCT
CTCGAGTAATTCGTCCAACCGGTACTCTCGTTGCCGTCGGGTCTCCCCCC
AACACTTCCATAAAGGCCAACGTCTTCTTCCCCGTCTTCTACTCCAAGCG
CAAATCGGGGCCTAACTTGGGAACAGGCAAGATGCCCGTGGAAGCTCCCA
ATTTCCCTGCCCCGGAAAAGGTACCCCCCCCAAATCGAGTTTTGCCCCCT
TGGAAAATTTTTCCCGAAATTTTAAAAACCCCAGGGGAAAAAGGGGCAAA
ATCCCCCGGGGAGAATTTTTTTCCCAAAAAATTTTAAAACCCTTCTCCCC
CCCCCTCCCCCCCCTCCCCCCCCCCTCTTCCCCCCTTTTTTGGGGTTTTT
AACCTTTTTCCCCCCCGGGGGCCCCCCCCTTTCCCGGGGGGCTCGGGGGG
GGGGGCCCCCCCGAGGAAAAAGGAGGGGGGAGAAA
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