DY258034

Overview
NameDY258034
Unique NameDY258034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:1920..2408. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PROMM (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9313) GN=proA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 6.500e-22
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV-DGDQG-VVYTHKNLAL 270
            + IV+ DQ+ AE FL  VDSA VFHN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRG GH+V D   G  ++TH++L L
Sbjct:  347 EAIVSNDQETAERFLQAVDSAGVFHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYRLRGQGHIVADYANGECMFTHRDLPL 438          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SPHWW (Gamma-glutamyl phosphate reductase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=proA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 8.489e-22
Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV EDQ  A+ FL  VDSA V HNAST+F DG  FGLGAE+GIST R+HARGPV +EGL T +W++RG G +
Sbjct:  354 DAIVTEDQPTADRFLAGVDSAIVMHNASTQFADGGEFGLGAEIGISTGRLHARGPVALEGLTTYKWLVRGEGQL 427          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_NOVAD (Gamma-glutamyl phosphate reductase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=proA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.109e-21
Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 216
            D IVA DQ VA+ FL +VDSA V HNAS++F DG  FGLGAE+GI+T R+HARGPV +EGL T +W++RG+G
Sbjct:  350 DAIVAADQDVADRFLAEVDSAIVMHNASSQFADGGEFGLGAEIGIATGRLHARGPVALEGLTTYKWLVRGSG 421          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_NATPD (Gamma-glutamyl phosphate reductase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=proA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.109e-21
Identity = 51/89 (57.30%), Postives = 67/89 (75.28%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHK 258
            + IV ED   A TF+ ++DSA+VFHNASTRF DG RFGLGAEVGIST +IHARGPVG++GL T ++ L G+GH+V    G+    ++H+
Sbjct:  342 ESIVTEDDGRASTFMRRLDSASVFHNASTRFSDGYRFGLGAEVGISTGKIHARGPVGLKGLTTYKYHLEGDGHLVATYAGEDAKPFSHE 430          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SYNPW (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain WH7803) GN=proA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.448e-21
Identity = 52/92 (56.52%), Postives = 65/92 (70.65%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV-VDGDQGVV-YTHKNLAL 270
            +CIV ED   A+ FL  +DSA V+HN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRG+GHV  D   G   +TH +L+L
Sbjct:  344 ECIVTEDAAAADRFLSSIDSAGVYHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYRLRGDGHVAADYASGASRFTHNDLSL 435          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SYNJA (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain JA-3-3Ab) GN=proA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.891e-21
Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKN 261
            + IV ED   A+ FL +VD+A VFHNASTRF DG R+GLGAEVGIST ++  RGPVG+EGL+T R+ LRG GH+V    G Q   + H++
Sbjct:  358 EAIVTEDAAAAQRFLDEVDAAGVFHNASTRFADGFRYGLGAEVGISTQKLPPRGPVGLEGLVTYRYQLRGRGHLVADYTGPQARPFQHRD 447          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SPHAL (Gamma-glutamyl phosphate reductase OS=Sphingopyxis alaskensis GN=proA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.213e-21
Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV ED   AE FL  VDSA V HNAST+F DG  FGLGAE+GI+T R+HARGPV +EGL T +W++RG+G +
Sbjct:  354 DAIVTEDAATAERFLTGVDSAIVMHNASTQFADGGEFGLGAEIGIATGRLHARGPVALEGLTTYKWLVRGSGQL 427          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PROM2 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9215) GN=proA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.502e-21
Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQGVVYTHKNL 264
            D I+ E+   A  F+  VDS+ VFHN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T ++ L+G GH+VD       +YTHK+L
Sbjct:  347 DGIITENSNTANKFMNVVDSSGVFHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYKYFLKGGGHIVDDFSSGKAIYTHKDL 436          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PROM3 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9303) GN=proA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.186e-21
Identity = 53/92 (57.61%), Postives = 66/92 (71.74%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV-DGDQG-VVYTHKNLAL 270
            + IV+ DQ+ AE FL  VDSA VFHN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRG G +V D   G  ++TH++L L
Sbjct:  347 EAIVSNDQETAERFLQVVDSAGVFHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYRLRGQGQIVADYANGECMFTHRDLPL 438          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SYNJB (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. GN=proA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 9.385e-21
Identity = 50/90 (55.56%), Postives = 63/90 (70.00%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKN 261
            + IV ED   A  FL +VD+A VFHNASTRF DG R+G GAEVGIST ++  RGPVG+EGL+T R+ LRG GH+V    G Q   + H++
Sbjct:  358 EAIVTEDAAAARRFLDEVDAAGVFHNASTRFADGFRYGFGAEVGISTQKLPPRGPVGLEGLVTYRYQLRGQGHLVADYTGPQARPFQHRD 447          
The following BLAST results are available for this feature:
BLAST of DY258034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_PROMM6.500e-2258.70Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_SPHWW8.489e-2263.51Gamma-glutamyl phosphate reductase OS=Sphingomonas... [more]
PROA_NOVAD1.109e-2163.89Gamma-glutamyl phosphate reductase OS=Novosphingob... [more]
PROA_NATPD1.109e-2157.30Gamma-glutamyl phosphate reductase OS=Natronomonas... [more]
PROA_SYNPW1.448e-2156.52Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_SYNJA1.891e-2156.67Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_SPHAL4.213e-2162.16Gamma-glutamyl phosphate reductase OS=Sphingopyxis... [more]
PROA_PROM25.502e-2153.33Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROM37.186e-2157.61Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_SYNJB9.385e-2155.56Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258034 ID=DY258034; Name=DY258034; organism=Citrus clementina; type=EST; length=489bp
GATTGCATTGTTGCAGAAGATCAAAAAGTTGCTGAAACATTTTTATGTCA
AGTTGACAGTGCTGCAGTATTTCATAATGCGAGTACACGATTCTGTGATG
GAGCACGATTTGGACTTGGTGCAGAGGTTGGAATAAGCACAAGCAGGATT
CATGCTCGCGGTCCAGTCGGAGTTGAAGGATTGCTAACTACTCGATGGAT
ATTGAGAGGGAATGGACACGTCGTAGATGGTGATCAAGGAGTCGTCTATA
CCCACAAGAATCTTGCCTTGCAATCCTAGTAACTTATGGTTCTAAACCAT
GTCATTTGTATAATATTATGCTAGCTGCTTCTGAGACTCTATTTACTTGG
TGTATATTTATTGCACTTTGCTGATGTTATTTATTAAGATCTTTAGTTTT
ATTACTTGGATCTTGCTTGGGGTAGAGCCTCATGTAATAGAAAGTTTCCT
CAAGTCAATAATGAAGTTCAGAATTTGAATTGAAAAAAA
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