DY258034

Overview
NameDY258034
Unique NameDY258034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PETMO (Gamma-glutamyl phosphate reductase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=proA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.556e-18
Identity = 40/74 (54.05%), Postives = 56/74 (75.68%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I+ E+  +A+ FL ++DSAAV+ NASTRF DG  FG GAE+GIST ++H RGP+G+  L TT++I+ GNG V
Sbjct:  342 EAIITENYTIAQKFLNEIDSAAVYVNASTRFTDGEEFGFGAEMGISTQKLHVRGPIGINELTTTKYIILGNGQV 415          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PARL1 (Gamma-glutamyl phosphate reductase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=proA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.556e-18
Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + IV  +Q  A+ FL +VDSA V HNAST+F DG  FG+GAE+GI+T + HARGPVGVE L + ++++RG+G V
Sbjct:  349 EAIVTANQVTADRFLAEVDSAIVLHNASTQFADGGEFGMGAEIGIATGKFHARGPVGVEQLTSFKYLVRGSGQV 422          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_OPITP (Gamma-glutamyl phosphate reductase OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=proA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.556e-18
Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV  D   A  FL  VDSAAVF NASTRF DG  FGLGAE+GIST R+HARGP+G+  L + +W++ G G V
Sbjct:  350 DAIVTNDTSAANRFLAGVDSAAVFWNASTRFNDGVEFGLGAEIGISTDRLHARGPMGLRELCSYKWLVSGIGQV 423          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_DIAST (Gamma-glutamyl phosphate reductase OS=Diaphorobacter sp. (strain TPSY) GN=proA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.556e-18
Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D I+  D   A+ FL  VDSA+V  NASTRF DG  +GLGAE+GIST + HARGPVG+EGL + +W++ G G V
Sbjct:  351 DAILTRDHMHAQQFLRDVDSASVMVNASTRFADGFEYGLGAEIGISTDKFHARGPVGIEGLTSLKWVVLGEGEV 424          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ACISJ (Gamma-glutamyl phosphate reductase OS=Acidovorax sp. (strain JS42) GN=proA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.556e-18
Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D I+  D   A+ FL  VDSA+V  NASTRF DG  +GLGAE+GIST + HARGPVG+EGL + +W++ G G V
Sbjct:  351 DAILTRDHMHAQQFLRDVDSASVMVNASTRFADGFEYGLGAEIGISTDKFHARGPVGIEGLTSLKWVVLGEGEV 424          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ACIAC (Gamma-glutamyl phosphate reductase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=proA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.556e-18
Identity = 41/74 (55.41%), Postives = 54/74 (72.97%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D I+  D   A+ FL +VDSA+V  NASTRF DG  +GLGAE+GIST + HARGPVG+EGL + +W++ G G +
Sbjct:  351 DAILTRDHMHAQRFLREVDSASVMVNASTRFADGFEYGLGAEIGISTDKFHARGPVGIEGLTSLKWVVLGEGDI 424          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SYNS3 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain CC9311) GN=proA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.338e-18
Identity = 48/90 (53.33%), Postives = 61/90 (67.78%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV-VDGDQG-VVYTHKNL 264
            + I   +   AE FL  VDSA V+HN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRG GHV  D  +G   ++H++L
Sbjct:  346 EAIATVNHDTAERFLRAVDSAGVYHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYRLRGEGHVAADFSEGREQFSHRDL 435          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_RHILO (Gamma-glutamyl phosphate reductase OS=Rhizobium loti GN=proA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.338e-18
Identity = 40/74 (54.05%), Postives = 56/74 (75.68%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I+AED K  E F  ++DSA + HNAST+F DG  FG+GAE+GI+T ++HARGPVGVE L + ++ +RG+G V
Sbjct:  353 EAIIAEDPKAVERFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTSFKYRVRGSGQV 426          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PSEFS (Gamma-glutamyl phosphate reductase OS=Pseudomonas fluorescens (strain SBW25) GN=proA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.338e-18
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV+E    A  FL +VDSA+V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL + ++++ G+GHV
Sbjct:  346 DAIVSEHFSDARRFLNEVDSASVMINASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTSEKYVVFGDGHV 419          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_MARAV (Gamma-glutamyl phosphate reductase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=proA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.338e-18
Identity = 41/74 (55.41%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D I+ E+   A  FL +VDS++V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + ++++ G+GH+
Sbjct:  343 DSIITENYTRARRFLTEVDSSSVMVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKYVVFGDGHI 416          
The following BLAST results are available for this feature:
BLAST of DY258034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_PETMO2.556e-1854.05Gamma-glutamyl phosphate reductase OS=Petrotoga mo... [more]
PROA_PARL12.556e-1855.41Gamma-glutamyl phosphate reductase OS=Parvibaculum... [more]
PROA_OPITP2.556e-1859.46Gamma-glutamyl phosphate reductase OS=Opitutus ter... [more]
PROA_DIAST2.556e-1856.76Gamma-glutamyl phosphate reductase OS=Diaphorobact... [more]
PROA_ACISJ2.556e-1856.76Gamma-glutamyl phosphate reductase OS=Acidovorax s... [more]
PROA_ACIAC2.556e-1855.41Gamma-glutamyl phosphate reductase OS=Acidovorax a... [more]
PROA_SYNS33.338e-1853.33Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_RHILO3.338e-1854.05Gamma-glutamyl phosphate reductase OS=Rhizobium lo... [more]
PROA_PSEFS3.338e-1858.11Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]
PROA_MARAV3.338e-1855.41Gamma-glutamyl phosphate reductase OS=Marinobacter... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258034 ID=DY258034; Name=DY258034; organism=Citrus clementina; type=EST; length=489bp
GATTGCATTGTTGCAGAAGATCAAAAAGTTGCTGAAACATTTTTATGTCA
AGTTGACAGTGCTGCAGTATTTCATAATGCGAGTACACGATTCTGTGATG
GAGCACGATTTGGACTTGGTGCAGAGGTTGGAATAAGCACAAGCAGGATT
CATGCTCGCGGTCCAGTCGGAGTTGAAGGATTGCTAACTACTCGATGGAT
ATTGAGAGGGAATGGACACGTCGTAGATGGTGATCAAGGAGTCGTCTATA
CCCACAAGAATCTTGCCTTGCAATCCTAGTAACTTATGGTTCTAAACCAT
GTCATTTGTATAATATTATGCTAGCTGCTTCTGAGACTCTATTTACTTGG
TGTATATTTATTGCACTTTGCTGATGTTATTTATTAAGATCTTTAGTTTT
ATTACTTGGATCTTGCTTGGGGTAGAGCCTCATGTAATAGAAAGTTTCCT
CAAGTCAATAATGAAGTTCAGAATTTGAATTGAAAAAAA
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