DY258034

Overview
NameDY258034
Unique NameDY258034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_HAHCH (Gamma-glutamyl phosphate reductase OS=Hahella chejuensis (strain KCTC 2396) GN=proA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.338e-18
Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV E       FL +VDS++V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + ++++ G+GH+
Sbjct:  343 DAIVTESYSKGRRFLTEVDSSSVMINASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKYVVLGDGHI 416          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_BRASO (Gamma-glutamyl phosphate reductase OS=Bradyrhizobium sp. (strain ORS278) GN=proA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.338e-18
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 216
            D IV +D KVA+ FL +VDSA V HNAST+F DG  FG GAE+GI+T + HARGPVGVE L + ++ + G G
Sbjct:  354 DAIVTQDNKVADKFLNEVDSAIVLHNASTQFADGGEFGFGAEIGIATGKFHARGPVGVEQLTSFKYRIHGTG 425          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_BACCQ (Gamma-glutamyl phosphate reductase OS=Bacillus cereus (strain Q1) GN=proA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.338e-18
Identity = 37/74 (50.00%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I++E+++    F   VD+AA++HNASTRF DG+ FG GAE+GIST ++H RGP+G+  L +T++I+RGNG +
Sbjct:  340 EAIISENEENVSKFFVSVDAAALYHNASTRFTDGSEFGFGAEIGISTQKLHVRGPMGLPALTSTKYIIRGNGQI 413          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_BACC7 (Gamma-glutamyl phosphate reductase OS=Bacillus cereus (strain AH187) GN=proA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.338e-18
Identity = 37/74 (50.00%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I++E+++    F   VD+AA++HNASTRF DG+ FG GAE+GIST ++H RGP+G+  L +T++I+RGNG +
Sbjct:  340 EAIISENEENVSKFFVSVDAAALYHNASTRFTDGSEFGFGAEIGISTQKLHVRGPMGLPALTSTKYIIRGNGQI 413          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ALHEH (Gamma-glutamyl phosphate reductase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=proA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.338e-18
Identity = 42/74 (56.76%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I+ ED   A  FL +VDS++V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL T ++I+ G+GH+
Sbjct:  345 ESILTEDWSRARRFLREVDSSSVMVNASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTTEKFIVLGDGHI 418          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SYNPX (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain WH8102) GN=proA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.360e-18
Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV----VDGDQGVVYTHKNLAL 270
            + I   D + AE FL  VDSA V+ N STRF DG R+G GAEVGIST  +  RGPVG++GL+T R+ LRG+GH+     DG +   +TH +L L
Sbjct:  344 EAIATTDDQAAERFLGAVDSAGVYLNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLDGLVTYRYRLRGDGHIAADFADGTRS--FTHTDLPL 435          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SYNP2 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=proA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.360e-18
Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNL 264
            D I+ ED   A+ FL +V +A V+HN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T ++ L GNG +     G     +TH++L
Sbjct:  338 DGIITEDAATAQIFLNEVKAAGVYHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYKYHLVGNGQIAATYSGPDAKPFTHRDL 428          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_RHOPS (Gamma-glutamyl phosphate reductase OS=Rhodopseudomonas palustris (strain BisB5) GN=proA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.360e-18
Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 216
            D IVAED K A  FL +VDSA V HNAST+F DG  FG GAE+GI+T + HARGPVG E L T ++ + G G
Sbjct:  355 DAIVAEDAKTAAKFLGEVDSAIVLHNASTQFADGGEFGFGAEIGIATGKFHARGPVGAEQLTTFKYRIHGTG 426          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_NITEC (Gamma-glutamyl phosphate reductase OS=Nitrosomonas eutropha (strain C91) GN=proA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.360e-18
Identity = 42/74 (56.76%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV E+   A  FL +VDS++V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL + ++I+ G+GH+
Sbjct:  347 DTIVTENYSRARQFLREVDSSSVMVNASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTSQKFIVLGDGHI 420          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_BORPD (Gamma-glutamyl phosphate reductase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=proA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.360e-18
Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 216
            D IV ED   A+ F  +VDS++V+ N  T F DG  +GLGAE+GIST+R+HARGPVG+EGL T +W+L G+G
Sbjct:  346 DAIVTEDLSAAQRFQREVDSSSVYVNLPTCFADGFEYGLGAEIGISTNRLHARGPVGLEGLTTLKWVLNGDG 417          
The following BLAST results are available for this feature:
BLAST of DY258034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_HAHCH3.338e-1855.41Gamma-glutamyl phosphate reductase OS=Hahella chej... [more]
PROA_BRASO3.338e-1858.33Gamma-glutamyl phosphate reductase OS=Bradyrhizobi... [more]
PROA_BACCQ3.338e-1850.00Gamma-glutamyl phosphate reductase OS=Bacillus cer... [more]
PROA_BACC73.338e-1850.00Gamma-glutamyl phosphate reductase OS=Bacillus cer... [more]
PROA_ALHEH3.338e-1856.76Gamma-glutamyl phosphate reductase OS=Alkalilimnic... [more]
PROA_SYNPX4.360e-1851.06Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_SYNP24.360e-1849.45Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_RHOPS4.360e-1859.72Gamma-glutamyl phosphate reductase OS=Rhodopseudom... [more]
PROA_NITEC4.360e-1856.76Gamma-glutamyl phosphate reductase OS=Nitrosomonas... [more]
PROA_BORPD4.360e-1856.94Gamma-glutamyl phosphate reductase OS=Bordetella p... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258034 ID=DY258034; Name=DY258034; organism=Citrus clementina; type=EST; length=489bp
GATTGCATTGTTGCAGAAGATCAAAAAGTTGCTGAAACATTTTTATGTCA
AGTTGACAGTGCTGCAGTATTTCATAATGCGAGTACACGATTCTGTGATG
GAGCACGATTTGGACTTGGTGCAGAGGTTGGAATAAGCACAAGCAGGATT
CATGCTCGCGGTCCAGTCGGAGTTGAAGGATTGCTAACTACTCGATGGAT
ATTGAGAGGGAATGGACACGTCGTAGATGGTGATCAAGGAGTCGTCTATA
CCCACAAGAATCTTGCCTTGCAATCCTAGTAACTTATGGTTCTAAACCAT
GTCATTTGTATAATATTATGCTAGCTGCTTCTGAGACTCTATTTACTTGG
TGTATATTTATTGCACTTTGCTGATGTTATTTATTAAGATCTTTAGTTTT
ATTACTTGGATCTTGCTTGGGGTAGAGCCTCATGTAATAGAAAGTTTCCT
CAAGTCAATAATGAAGTTCAGAATTTGAATTGAAAAAAA
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