DY258034

Overview
NameDY258034
Unique NameDY258034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_RHOPT (Gamma-glutamyl phosphate reductase OS=Rhodopseudomonas palustris (strain TIE-1) GN=proA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.268e-17
Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 216
            D IVAED + A  FL +VDSA V HNAST+F DG  FG GAE+GI+T + HARGPVG E L T ++ + G+G
Sbjct:  355 DAIVAEDVQAAAKFLGEVDSAIVLHNASTQFADGGEFGFGAEIGIATGKFHARGPVGAEQLTTFKYRIHGSG 426          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_RHOP2 (Gamma-glutamyl phosphate reductase OS=Rhodopseudomonas palustris (strain HaA2) GN=proA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.268e-17
Identity = 42/72 (58.33%), Postives = 51/72 (70.83%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 216
            D IVAED + A  FL +VDSA V HNAST+F DG  FG GAE+GI+T + HARGPVG E L T ++ + G G
Sbjct:  355 DAIVAEDAQTAAKFLGEVDSAIVLHNASTQFADGGEFGFGAEIGIATGKFHARGPVGAEQLTTFKYRIHGTG 426          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_LARHH (Gamma-glutamyl phosphate reductase OS=Laribacter hongkongensis (strain HLHK9) GN=proA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.268e-17
Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D I+ E+   A  FL +VDS++V  NAS+RF DG  +GLGAE+GIST +IHARGPVG++GL + +WI+ G+G V
Sbjct:  345 DVIITENYSSARRFLREVDSSSVMVNASSRFADGFEYGLGAEIGISTDKIHARGPVGLKGLTSEKWIVFGDGQV 418          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_HALOH (Gamma-glutamyl phosphate reductase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=proA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.268e-17
Identity = 40/74 (54.05%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I+ E+   A  FL ++D+AAV+ NASTRF DG +FGLGAE+GIST ++HARGP+G+E L TT++I+ G G +
Sbjct:  343 EAIITENYTRAHRFLQEIDAAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEELTTTKYIIFGQGQI 416          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_DESHY (Gamma-glutamyl phosphate reductase OS=Desulfitobacterium hafniense (strain Y51) GN=proA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.268e-17
Identity = 39/75 (52.00%), Postives = 57/75 (76.00%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV 225
            + I+ E+   A+ FL +VD+AAV+ NASTRF DG RFG GAE+GIST ++HARGP+G++ L T ++++ G  H+V
Sbjct:  342 ETIITENYTTAQRFLNEVDAAAVYVNASTRFTDGGRFGFGAEIGISTQKLHARGPMGLQALTTMKYMVYGEDHIV 416          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_DESHD (Gamma-glutamyl phosphate reductase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=proA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.268e-17
Identity = 39/75 (52.00%), Postives = 57/75 (76.00%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV 225
            + I+ E+   A+ FL +VD+AAV+ NASTRF DG RFG GAE+GIST ++HARGP+G++ L T ++++ G  H+V
Sbjct:  342 ETIITENYTTAQRFLNEVDAAAVYVNASTRFTDGGRFGFGAEIGISTQKLHARGPMGLQALTTMKYMVYGEDHIV 416          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_BACV8 (Gamma-glutamyl phosphate reductase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=proA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.268e-17
Identity = 38/74 (51.35%), Postives = 55/74 (74.32%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            +CIV E+ + A+ F+  VD+A V+ N  T F DG  FGLGAE+GIST ++HARGP+G+E L T +WI++G+G +
Sbjct:  342 ECIVTENDRAADYFMKMVDAACVYVNVPTSFTDGGEFGLGAEIGISTQKLHARGPMGLEELNTYKWIIQGDGQI 415          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_THEYD (Gamma-glutamyl phosphate reductase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=proA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.657e-17
Identity = 44/74 (59.46%), Postives = 56/74 (75.68%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV +D   A  FL +VDS+AVF NASTR  DG +FGLGAE+GIST +IHARGP+G+E L  T++I+ GNG +
Sbjct:  343 DSIVTKDYNKAMKFLKEVDSSAVFVNASTRLNDGYQFGLGAEIGISTDKIHARGPMGLEELTCTKFIVFGNGQI 416          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_THEFY (Gamma-glutamyl phosphate reductase OS=Thermobifida fusca (strain YX) GN=proA PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.657e-17
Identity = 40/74 (54.05%), Postives = 53/74 (71.62%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I+ + Q  A  F+  VDSAAV  NASTRF DG  FG GAE+GIST ++HARGP+G+  L TT++++ G GHV
Sbjct:  344 EAIITDSQAAARRFVSLVDSAAVMVNASTRFTDGGEFGFGAEIGISTQKLHARGPMGLPELTTTKYVVTGEGHV 417          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_STRSY (Gamma-glutamyl phosphate reductase OS=Streptococcus suis (strain 05ZYH33) GN=proA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.657e-17
Identity = 40/74 (54.05%), Postives = 55/74 (74.32%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + IV E+ + AE F   VDSAAV+ NASTRF DG  FGLG E+GIST ++HARGP+G+  + T ++I+ G+GH+
Sbjct:  338 EAIVTENSQTAEHFTLHVDSAAVYVNASTRFTDGGEFGLGCELGISTQKMHARGPMGLREMTTYKYIITGDGHI 411          
The following BLAST results are available for this feature:
BLAST of DY258034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_RHOPT1.268e-1758.33Gamma-glutamyl phosphate reductase OS=Rhodopseudom... [more]
PROA_RHOP21.268e-1758.33Gamma-glutamyl phosphate reductase OS=Rhodopseudom... [more]
PROA_LARHH1.268e-1755.41Gamma-glutamyl phosphate reductase OS=Laribacter h... [more]
PROA_HALOH1.268e-1754.05Gamma-glutamyl phosphate reductase OS=Halothermoth... [more]
PROA_DESHY1.268e-1752.00Gamma-glutamyl phosphate reductase OS=Desulfitobac... [more]
PROA_DESHD1.268e-1752.00Gamma-glutamyl phosphate reductase OS=Desulfitobac... [more]
PROA_BACV81.268e-1751.35Gamma-glutamyl phosphate reductase OS=Bacteroides ... [more]
PROA_THEYD1.657e-1759.46Gamma-glutamyl phosphate reductase OS=Thermodesulf... [more]
PROA_THEFY1.657e-1754.05Gamma-glutamyl phosphate reductase OS=Thermobifida... [more]
PROA_STRSY1.657e-1754.05Gamma-glutamyl phosphate reductase OS=Streptococcu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258034 ID=DY258034; Name=DY258034; organism=Citrus clementina; type=EST; length=489bp
GATTGCATTGTTGCAGAAGATCAAAAAGTTGCTGAAACATTTTTATGTCA
AGTTGACAGTGCTGCAGTATTTCATAATGCGAGTACACGATTCTGTGATG
GAGCACGATTTGGACTTGGTGCAGAGGTTGGAATAAGCACAAGCAGGATT
CATGCTCGCGGTCCAGTCGGAGTTGAAGGATTGCTAACTACTCGATGGAT
ATTGAGAGGGAATGGACACGTCGTAGATGGTGATCAAGGAGTCGTCTATA
CCCACAAGAATCTTGCCTTGCAATCCTAGTAACTTATGGTTCTAAACCAT
GTCATTTGTATAATATTATGCTAGCTGCTTCTGAGACTCTATTTACTTGG
TGTATATTTATTGCACTTTGCTGATGTTATTTATTAAGATCTTTAGTTTT
ATTACTTGGATCTTGCTTGGGGTAGAGCCTCATGTAATAGAAAGTTTCCT
CAAGTCAATAATGAAGTTCAGAATTTGAATTGAAAAAAA
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