DY258034

Overview
NameDY258034
Unique NameDY258034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:1920..2408. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PROM5 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9515) GN=proA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 9.385e-21
Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQGVVYTHKNL 264
            D I+ E+   A  F+ ++DSA VFHN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T ++ LRG GH VD       +YTHK+L
Sbjct:  347 DGIITENISNANKFMSEIDSAGVFHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYKYFLRGEGHSVDDFSSGKSIYTHKDL 436          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PROM0 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9301) GN=proA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 9.385e-21
Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQ--GVVYTHKNL 264
            D I+ E+ K A  F+  VDSA VFHN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T ++ L+G+G++VD       +YTHK+L
Sbjct:  347 DGIITENLKTANRFMNVVDSAGVFHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYKYFLKGDGNIVDDFSLGKAIYTHKDL 436          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_TRIEI (Gamma-glutamyl phosphate reductase OS=Trichodesmium erythraeum (strain IMS101) GN=proA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.226e-20
Identity = 47/90 (52.22%), Postives = 63/90 (70.00%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKN 261
            D I+ ED K AE FL Q+ SA VFHN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T ++ + G+GH+     G+    +TH++
Sbjct:  341 DAIITEDGKAAEIFLAQIGSAGVFHNCSTRFSDGFRYGFGAEVGISTQKMPPRGPVGLEGLVTYKYQIVGDGHIAATYSGENAKPFTHQD 430          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_BEII9 (Gamma-glutamyl phosphate reductase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=proA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.226e-20
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            DCI+ EDQ+ A+ FL +VDSA V HNAST+F DG  FG GAE+GI+T R+HARGPVG+E L + ++ + GNG +
Sbjct:  356 DCIITEDQEAADRFLAEVDSAIVMHNASTQFADGGEFGFGAEIGIATGRLHARGPVGLEQLTSFKYRVHGNGQI 429          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PROMP (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=proA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.601e-20
Identity = 46/90 (51.11%), Postives = 64/90 (71.11%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQGVVYTHKNL 264
            D I+ E+   A  F+ ++DS+ VFHN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T ++ LRG GH+VD      ++Y+HK++
Sbjct:  347 DGIITENINNANKFMSEIDSSGVFHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYKYFLRGEGHIVDDFSSGKLIYSHKDV 436          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ACAM1 (Gamma-glutamyl phosphate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=proA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.601e-20
Identity = 49/91 (53.85%), Postives = 62/91 (68.13%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNL 264
            D I  ED + A  F+ QVD+A VFHN STRF DG R+G GAEVGIST R+  RGPVG+EGL+T ++ L+G G +V    G     +THK+L
Sbjct:  341 DAIATEDDQAAAVFMNQVDAAGVFHNCSTRFADGFRYGFGAEVGISTQRMPPRGPVGLEGLVTYKYQLKGQGQIVATYAGSDARPFTHKDL 431          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PROMT (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=proA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.091e-20
Identity = 52/94 (55.32%), Postives = 66/94 (70.21%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV----DGDQGVVYTHKNLAL 270
            + IV ED+ VAE FL  VDSA V+HN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRG+G +V     GD+   ++H +L L
Sbjct:  347 EAIVTEDKMVAEKFLSSVDSAGVYHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYYLRGDGDLVKDFASGDRS--FSHIDLPL 438          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PROMS (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain AS9601) GN=proA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.091e-20
Identity = 47/90 (52.22%), Postives = 63/90 (70.00%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQGVVYTHKNL 264
            D I+ E+   A  F+  +DSA VFHN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T ++ L+G+G++VD       +YTHK+L
Sbjct:  347 DGIITENSHTANKFMNVIDSAGVFHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYKYFLKGDGNIVDDFSSGKAIYTHKDL 436          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PROM1 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain NATL1A) GN=proA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.091e-20
Identity = 52/94 (55.32%), Postives = 66/94 (70.21%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV----DGDQGVVYTHKNLAL 270
            + IV ED+ VAE FL  VDSA V+HN STRF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRG+G +V     GD+   ++H +L L
Sbjct:  347 EAIVTEDKMVAEKFLSSVDSAGVYHNCSTRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYYLRGDGDLVKDFASGDRS--FSHIDLPL 438          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_THEEB (Gamma-glutamyl phosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=proA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.731e-20
Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNL 264
            + IV ED   A  FL +VD+A VFHN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T ++ L GNGH+V    G     +TH++L
Sbjct:  347 EAIVTEDAAAAARFLQEVDAAGVFHNCSTRFADGFRYGFGAEVGISTHKLPPRGPVGLEGLVTYKYQLVGNGHIVATYSGANARPFTHRDL 437          
The following BLAST results are available for this feature:
BLAST of DY258034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_PROM59.385e-2154.44Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROM09.385e-2154.44Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_TRIEI1.226e-2052.22Gamma-glutamyl phosphate reductase OS=Trichodesmiu... [more]
PROA_BEII91.226e-2058.11Gamma-glutamyl phosphate reductase OS=Beijerinckia... [more]
PROA_PROMP1.601e-2051.11Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_ACAM11.601e-2053.85Gamma-glutamyl phosphate reductase OS=Acaryochlori... [more]
PROA_PROMT2.091e-2055.32Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROMS2.091e-2052.22Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROM12.091e-2055.32Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_THEEB2.731e-2053.85Gamma-glutamyl phosphate reductase OS=Thermosynech... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258034 ID=DY258034; Name=DY258034; organism=Citrus clementina; type=EST; length=489bp
GATTGCATTGTTGCAGAAGATCAAAAAGTTGCTGAAACATTTTTATGTCA
AGTTGACAGTGCTGCAGTATTTCATAATGCGAGTACACGATTCTGTGATG
GAGCACGATTTGGACTTGGTGCAGAGGTTGGAATAAGCACAAGCAGGATT
CATGCTCGCGGTCCAGTCGGAGTTGAAGGATTGCTAACTACTCGATGGAT
ATTGAGAGGGAATGGACACGTCGTAGATGGTGATCAAGGAGTCGTCTATA
CCCACAAGAATCTTGCCTTGCAATCCTAGTAACTTATGGTTCTAAACCAT
GTCATTTGTATAATATTATGCTAGCTGCTTCTGAGACTCTATTTACTTGG
TGTATATTTATTGCACTTTGCTGATGTTATTTATTAAGATCTTTAGTTTT
ATTACTTGGATCTTGCTTGGGGTAGAGCCTCATGTAATAGAAAGTTTCCT
CAAGTCAATAATGAAGTTCAGAATTTGAATTGAAAAAAA
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