DY258034

Overview
NameDY258034
Unique NameDY258034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_MAGSA (Gamma-glutamyl phosphate reductase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=proA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.731e-20
Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDG 231
            + IVAED +VAETFL   DSA V  NAST+F DG  FG+GAE+GIST ++HARGPVGVE L T +++++GNG V  G
Sbjct:  347 EAIVAEDSQVAETFLNGCDSAIVLWNASTQFADGGEFGMGAEIGISTGKMHARGPVGVEQLCTFKYVVKGNGQVRPG 423          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_CLOCE (Gamma-glutamyl phosphate reductase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=proA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.731e-20
Identity = 46/76 (60.53%), Postives = 60/76 (78.95%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD 228
            DCIV +D+  A  F+  VDS  VF NASTRF DG ++G GAEVGISTS++HARGPVG++GLL+ +++L GNG +VD
Sbjct:  336 DCIVTKDKAKAVNFMNLVDSGNVFWNASTRFSDGFKYGFGAEVGISTSKLHARGPVGLDGLLSYKYMLIGNGQIVD 411          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_THIDA (Gamma-glutamyl phosphate reductase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=proA PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 3.566e-20
Identity = 46/74 (62.16%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV ED   A  FL +VDSA+V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +W++ G+GHV
Sbjct:  350 DAIVTEDYGRARRFLREVDSASVVVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWVVLGDGHV 423          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PROM9 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9312) GN=proA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.658e-20
Identity = 47/90 (52.22%), Postives = 63/90 (70.00%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQGVVYTHKNL 264
            D I+ E+   A+ F+  VDSA VFHN STRF DG R+G GAE+GIST  +  RGPVG+EGL+T ++ L G+G++VD       +YTHK+L
Sbjct:  347 DGIITENSTSAKKFMNVVDSAGVFHNCSTRFADGFRYGFGAEIGISTQTLPPRGPVGLEGLVTYKYFLNGDGNIVDDFSSGKAIYTHKDL 436          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_LEGPL (Gamma-glutamyl phosphate reductase OS=Legionella pneumophila (strain Lens) GN=proA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.658e-20
Identity = 41/76 (53.95%), Postives = 58/76 (76.32%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD 228
            + I+AED+   + FL +VD+AAV+ NAST F DG  FGLGAE+GIST ++HARGP+G+E L + +W++RG G + D
Sbjct:  342 EAIIAEDESAIDQFLIEVDAAAVYANASTAFTDGGEFGLGAEIGISTQKVHARGPMGLEALTSYKWVIRGTGQIRD 417          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_HYPNA (Gamma-glutamyl phosphate reductase OS=Hyphomonas neptunium (strain ATCC 15444) GN=proA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.658e-20
Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D I+ ED   AETF+  VDSA V HNAST+F DG  FG GAE+GI+T RIHARGPVG E L T ++ +RG G V
Sbjct:  353 DAIITEDTAAAETFIANVDSAIVLHNASTQFADGGEFGFGAEIGIATGRIHARGPVGAEQLTTYKYAVRGTGQV 426          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_HALHL (Gamma-glutamyl phosphate reductase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=proA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.658e-20
Identity = 44/74 (59.46%), Postives = 58/74 (78.38%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + IV E   +A+ FL +VDS++V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL T +WI+ G+GHV
Sbjct:  349 EAIVTESYPLAQRFLREVDSSSVMVNASTRFADGQEYGLGAEIGISTDKLHARGPVGLEGLTTEKWIVLGDGHV 422          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SACD2 (Gamma-glutamyl phosphate reductase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=proA PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 6.083e-20
Identity = 43/74 (58.11%), Postives = 59/74 (79.73%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D +V+E+  +A  FL +VDS++V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +WI+ G+GH+
Sbjct:  347 DALVSENYTLARKFLTEVDSSSVMINASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWIVFGDGHI 420          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_RHORT (Gamma-glutamyl phosphate reductase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=proA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.083e-20
Identity = 45/72 (62.50%), Postives = 54/72 (75.00%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 216
            DCI+ ED   AE FL +VDSA V HNAST+F DG  FG+GAE+GIST R+HARGPVGVE L   ++ +RG G
Sbjct:  352 DCILTEDAAAAERFLTEVDSAIVMHNASTQFADGGEFGMGAEIGISTGRLHARGPVGVEQLTIFKYKVRGTG 423          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_MICAN (Gamma-glutamyl phosphate reductase OS=Microcystis aeruginosa (strain NIES-843) GN=proA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.083e-20
Identity = 48/89 (53.93%), Postives = 65/89 (73.03%), Query Frame = 1
Query:    7 IVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNL 264
            IV+E+   A+TF  +VD+A VFHN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T ++ L G+GH+V    G+    +THK+L
Sbjct:  343 IVSENFNTAKTFSDRVDAAGVFHNCSTRFADGFRYGFGAEVGISTQKMPPRGPVGLEGLVTYKYQLVGDGHIVADYSGENAQSFTHKDL 431          
The following BLAST results are available for this feature:
BLAST of DY258034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_MAGSA2.731e-2061.04Gamma-glutamyl phosphate reductase OS=Magnetospiri... [more]
PROA_CLOCE2.731e-2060.53Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_THIDA3.566e-2062.16Gamma-glutamyl phosphate reductase OS=Thiobacillus... [more]
PROA_PROM94.658e-2052.22Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_LEGPL4.658e-2053.95Gamma-glutamyl phosphate reductase OS=Legionella p... [more]
PROA_HYPNA4.658e-2060.81Gamma-glutamyl phosphate reductase OS=Hyphomonas n... [more]
PROA_HALHL4.658e-2059.46Gamma-glutamyl phosphate reductase OS=Halorhodospi... [more]
PROA_SACD26.083e-2058.11Gamma-glutamyl phosphate reductase OS=Saccharophag... [more]
PROA_RHORT6.083e-2062.50Gamma-glutamyl phosphate reductase OS=Rhodospirill... [more]
PROA_MICAN6.083e-2053.93Gamma-glutamyl phosphate reductase OS=Microcystis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258034 ID=DY258034; Name=DY258034; organism=Citrus clementina; type=EST; length=489bp
GATTGCATTGTTGCAGAAGATCAAAAAGTTGCTGAAACATTTTTATGTCA
AGTTGACAGTGCTGCAGTATTTCATAATGCGAGTACACGATTCTGTGATG
GAGCACGATTTGGACTTGGTGCAGAGGTTGGAATAAGCACAAGCAGGATT
CATGCTCGCGGTCCAGTCGGAGTTGAAGGATTGCTAACTACTCGATGGAT
ATTGAGAGGGAATGGACACGTCGTAGATGGTGATCAAGGAGTCGTCTATA
CCCACAAGAATCTTGCCTTGCAATCCTAGTAACTTATGGTTCTAAACCAT
GTCATTTGTATAATATTATGCTAGCTGCTTCTGAGACTCTATTTACTTGG
TGTATATTTATTGCACTTTGCTGATGTTATTTATTAAGATCTTTAGTTTT
ATTACTTGGATCTTGCTTGGGGTAGAGCCTCATGTAATAGAAAGTTTCCT
CAAGTCAATAATGAAGTTCAGAATTTGAATTGAAAAAAA
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