DY258034

Overview
NameDY258034
Unique NameDY258034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:1920..2408. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_LEGPH (Gamma-glutamyl phosphate reductase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=proA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.083e-20
Identity = 40/76 (52.63%), Postives = 58/76 (76.32%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD 228
            + ++AED+   + FL +VD+AAV+ NAST F DG  FGLGAE+GIST ++HARGP+G+E L + +W++RG G + D
Sbjct:  342 EAVIAEDESAIDKFLTEVDAAAVYANASTAFTDGGEFGLGAEIGISTQKVHARGPMGLEALTSYKWVIRGTGQIRD 417          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_LEGPA (Gamma-glutamyl phosphate reductase OS=Legionella pneumophila (strain Paris) GN=proA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.083e-20
Identity = 40/76 (52.63%), Postives = 58/76 (76.32%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD 228
            + ++AED+   + FL +VD+AAV+ NAST F DG  FGLGAE+GIST ++HARGP+G+E L + +W++RG G + D
Sbjct:  342 EAVIAEDESAIDKFLTEVDAAAVYANASTAFTDGGEFGLGAEIGISTQKVHARGPMGLEALTSYKWVIRGTGQIRD 417          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_CYAP4 (Gamma-glutamyl phosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=proA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.083e-20
Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNL 264
            + IV  D+  A TFL +VD+A VFHN STRF DG R+GLGAEVGIST ++  RGPVG+EGL+T ++ L G G VV    G     +TH++L
Sbjct:  343 EAIVTADENAATTFLHEVDAAGVFHNCSTRFADGFRYGLGAEVGISTHKLPPRGPVGLEGLVTYKYQLVGQGQVVSTYSGPSAKPFTHRDL 433          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_NITOC (Gamma-glutamyl phosphate reductase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=proA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.945e-20
Identity = 44/74 (59.46%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + IV ED   A  FL +VDS++V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL + +WI+ GNGH+
Sbjct:  343 ETIVTEDFTRARRFLTEVDSSSVMVNASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTSQKWIVLGNGHI 416          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_CLAM3 (Gamma-glutamyl phosphate reductase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=proA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.945e-20
Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + IV  D  VAE FL  VDSA V  NASTRF DG+ FG GAEVGIST ++HARGP+GV+ L +T+WI+RG+G V
Sbjct:  357 ESIVTSDLAVAERFLAAVDSAVVMVNASTRFTDGSEFGFGAEVGISTQKLHARGPMGVQELTSTKWIVRGSGQV 430          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_HALWD (Gamma-glutamyl phosphate reductase OS=Haloquadratum walsbyi (strain DSM 16790) GN=proA PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.038e-19
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV 225
            + I+ +D   AE F+  VD+A+VFHNASTRF DG RFGLGAEVGIST +IHARGPVG++GL T ++ L G+G  V
Sbjct:  355 ESILTQDDNRAEQFMRAVDAASVFHNASTRFADGFRFGLGAEVGISTGKIHARGPVGLDGLTTYKYHLEGDGQQV 429          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ZYMMO (Gamma-glutamyl phosphate reductase OS=Zymomonas mobilis GN=proA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.355e-19
Identity = 44/74 (59.46%), Postives = 56/74 (75.68%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D I+ E+++VAE FL  VDSA V  NAST+F DG  FGLGAE+GI+T RIHARGPV +EGL + +W +RG G +
Sbjct:  351 DAILTENREVAEKFLASVDSAIVMWNASTQFADGGEFGLGAEIGIATGRIHARGPVALEGLTSYKWQVRGTGQI 424          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_YEAST (Gamma-glutamyl phosphate reductase OS=Saccharomyces cerevisiae GN=PRO2 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.770e-19
Identity = 48/96 (50.00%), Postives = 68/96 (70.83%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGV----VYTHKNLALQS 276
            D IV E++  AE F+  VDS+ V+ NASTRF DG R+G GAEVGISTS+IHARGPVG++GL++ ++ +RG+G V     G      + HK+L +++
Sbjct:  358 DAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGDGQVASDYLGAGGNKAFVHKDLDIKT 453          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SYNS9 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain CC9902) GN=proA PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.770e-19
Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV-VDGDQG-VVYTHKNLAL 270
            + I+ ED   A+ FL  VDSA V+HN S+RF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRGNGH+  D   G   +TH++L L
Sbjct:  346 EVILTEDLATADRFLAAVDSAGVYHNCSSRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYRLRGNGHIAADYAAGRRSFTHQDLPL 437          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_NOSP7 (Gamma-glutamyl phosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=proA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.770e-19
Identity = 46/91 (50.55%), Postives = 62/91 (68.13%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNL 264
            D I+ ED    ETF   V+SA +FHN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T ++ + G+GH+V    G     +TH++L
Sbjct:  344 DAIITEDSTSVETFFGLVNSANIFHNCSTRFADGFRYGFGAEVGISTQQMPPRGPVGLEGLVTYKYQMTGDGHIVATYTGANAKAFTHRDL 434          
The following BLAST results are available for this feature:
BLAST of DY258034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_LEGPH6.083e-2052.63Gamma-glutamyl phosphate reductase OS=Legionella p... [more]
PROA_LEGPA6.083e-2052.63Gamma-glutamyl phosphate reductase OS=Legionella p... [more]
PROA_CYAP46.083e-2053.85Gamma-glutamyl phosphate reductase OS=Cyanothece s... [more]
PROA_NITOC7.945e-2059.46Gamma-glutamyl phosphate reductase OS=Nitrosococcu... [more]
PROA_CLAM37.945e-2062.16Gamma-glutamyl phosphate reductase OS=Clavibacter ... [more]
PROA_HALWD1.038e-1961.33Gamma-glutamyl phosphate reductase OS=Haloquadratu... [more]
PROA_ZYMMO1.355e-1959.46Gamma-glutamyl phosphate reductase OS=Zymomonas mo... [more]
PROA_YEAST1.770e-1950.00Gamma-glutamyl phosphate reductase OS=Saccharomyce... [more]
PROA_SYNS91.770e-1954.35Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_NOSP71.770e-1950.55Gamma-glutamyl phosphate reductase OS=Nostoc punct... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258034 ID=DY258034; Name=DY258034; organism=Citrus clementina; type=EST; length=489bp
GATTGCATTGTTGCAGAAGATCAAAAAGTTGCTGAAACATTTTTATGTCA
AGTTGACAGTGCTGCAGTATTTCATAATGCGAGTACACGATTCTGTGATG
GAGCACGATTTGGACTTGGTGCAGAGGTTGGAATAAGCACAAGCAGGATT
CATGCTCGCGGTCCAGTCGGAGTTGAAGGATTGCTAACTACTCGATGGAT
ATTGAGAGGGAATGGACACGTCGTAGATGGTGATCAAGGAGTCGTCTATA
CCCACAAGAATCTTGCCTTGCAATCCTAGTAACTTATGGTTCTAAACCAT
GTCATTTGTATAATATTATGCTAGCTGCTTCTGAGACTCTATTTACTTGG
TGTATATTTATTGCACTTTGCTGATGTTATTTATTAAGATCTTTAGTTTT
ATTACTTGGATCTTGCTTGGGGTAGAGCCTCATGTAATAGAAAGTTTCCT
CAAGTCAATAATGAAGTTCAGAATTTGAATTGAAAAAAA
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