DY258034

Overview
NameDY258034
Unique NameDY258034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_MYCTA (Gamma-glutamyl phosphate reductase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=proA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.025e-15
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGH 219
            + IV  +   A+ F  Q+D+AAV  NAST F DG +FG GAE+GIST ++HARGP+G+  L +T+WI  G GH
Sbjct:  339 EAIVTTNLDAAQRFTEQIDAAAVMVNASTAFTDGEQFGFGAEIGISTQKLHARGPMGLPELTSTKWIAWGAGH 411          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_MYCMM (Gamma-glutamyl phosphate reductase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=proA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.025e-15
Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGH 219
            + IV  +   A+ F  ++D+AAV  NAST F DG +FG GAE+GIST ++HARGP+G+  L +T+WI+ G GH
Sbjct:  347 EAIVTTNLAAAQRFTERIDAAAVMVNASTAFTDGEQFGFGAEIGISTQKLHARGPMGLPELTSTKWIVWGEGH 419          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_MYCBT (Gamma-glutamyl phosphate reductase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=proA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.025e-15
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGH 219
            + IV  +   A+ F  Q+D+AAV  NAST F DG +FG GAE+GIST ++HARGP+G+  L +T+WI  G GH
Sbjct:  339 EAIVTTNLDAAQRFTEQIDAAAVMVNASTAFTDGEQFGFGAEIGISTQKLHARGPMGLPELTSTKWIAWGAGH 411          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_MYCBP (Gamma-glutamyl phosphate reductase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=proA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.025e-15
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGH 219
            + IV  +   A+ F  Q+D+AAV  NAST F DG +FG GAE+GIST ++HARGP+G+  L +T+WI  G GH
Sbjct:  339 EAIVTTNLDAAQRFTEQIDAAAVMVNASTAFTDGEQFGFGAEIGISTQKLHARGPMGLPELTSTKWIAWGAGH 411          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_MYCBO (Gamma-glutamyl phosphate reductase OS=Mycobacterium bovis GN=proA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.025e-15
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGH 219
            + IV  +   A+ F  Q+D+AAV  NAST F DG +FG GAE+GIST ++HARGP+G+  L +T+WI  G GH
Sbjct:  339 EAIVTTNLDAAQRFTEQIDAAAVMVNASTAFTDGEQFGFGAEIGISTQKLHARGPMGLPELTSTKWIAWGAGH 411          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_LEPIN (Gamma-glutamyl phosphate reductase OS=Leptospira interrogans GN=proA PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.025e-15
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + IV ED   A  F   +DSAA+F N STRF DG  FGLGAEVGIST ++H RGP+G+  L TT   + GNG +
Sbjct:  341 EAIVTEDLNTARIFTNSLDSAALFINCSTRFHDGGEFGLGAEVGISTGKLHVRGPMGLVHLTTTTTYVTGNGQI 414          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_LEPIC (Gamma-glutamyl phosphate reductase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=proA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.025e-15
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + IV ED   A  F   +DSAA+F N STRF DG  FGLGAEVGIST ++H RGP+G+  L TT   + GNG +
Sbjct:  341 EAIVTEDLNTARIFTNSLDSAALFINCSTRFHDGGEFGLGAEVGISTGKLHVRGPMGLVHLTTTTTYVTGNGQI 414          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_CLONN (Gamma-glutamyl phosphate reductase OS=Clostridium novyi (strain NT) GN=proA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.025e-15
Identity = 35/74 (47.30%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + IV  + + ++ FL +VD+AAV+ NAS+RF DG+ FG GAE+GIST ++HARGP+G++ L ++++I+ G G +
Sbjct:  343 EVIVTNNYENSQRFLAEVDAAAVYVNASSRFTDGSEFGFGAEIGISTQKLHARGPMGLKELTSSKYIIYGEGQI 416          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_CITK8 (Gamma-glutamyl phosphate reductase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=proA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.025e-15
Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 201
            D I+    + A+ F+ +VDS+AV+ NASTRF DG +FGLGAEV +ST ++HARGP+G+E L T +WI
Sbjct:  342 DAILTRTLRNADRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWI 408          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_STRCO (Gamma-glutamyl phosphate reductase OS=Streptomyces coelicolor GN=proA PE=3 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 2.645e-15
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + IV   Q+ A  F   VDS  V  N STRF DG +FG GAE+GIST ++HARGP+G+  L +T++I+ G+GHV
Sbjct:  353 EAIVTTSQQAARRFTQLVDSTTVAVNTSTRFTDGGQFGFGAEIGISTQKLHARGPMGLPELTSTKYIVTGDGHV 426          
The following BLAST results are available for this feature:
BLAST of DY258034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_MYCTA2.025e-1552.05Gamma-glutamyl phosphate reductase OS=Mycobacteriu... [more]
PROA_MYCMM2.025e-1550.68Gamma-glutamyl phosphate reductase OS=Mycobacteriu... [more]
PROA_MYCBT2.025e-1552.05Gamma-glutamyl phosphate reductase OS=Mycobacteriu... [more]
PROA_MYCBP2.025e-1552.05Gamma-glutamyl phosphate reductase OS=Mycobacteriu... [more]
PROA_MYCBO2.025e-1552.05Gamma-glutamyl phosphate reductase OS=Mycobacteriu... [more]
PROA_LEPIN2.025e-1554.05Gamma-glutamyl phosphate reductase OS=Leptospira i... [more]
PROA_LEPIC2.025e-1554.05Gamma-glutamyl phosphate reductase OS=Leptospira i... [more]
PROA_CLONN2.025e-1547.30Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_CITK82.025e-1555.22Gamma-glutamyl phosphate reductase OS=Citrobacter ... [more]
PROA_STRCO2.645e-1551.35Gamma-glutamyl phosphate reductase OS=Streptomyces... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258034 ID=DY258034; Name=DY258034; organism=Citrus clementina; type=EST; length=489bp
GATTGCATTGTTGCAGAAGATCAAAAAGTTGCTGAAACATTTTTATGTCA
AGTTGACAGTGCTGCAGTATTTCATAATGCGAGTACACGATTCTGTGATG
GAGCACGATTTGGACTTGGTGCAGAGGTTGGAATAAGCACAAGCAGGATT
CATGCTCGCGGTCCAGTCGGAGTTGAAGGATTGCTAACTACTCGATGGAT
ATTGAGAGGGAATGGACACGTCGTAGATGGTGATCAAGGAGTCGTCTATA
CCCACAAGAATCTTGCCTTGCAATCCTAGTAACTTATGGTTCTAAACCAT
GTCATTTGTATAATATTATGCTAGCTGCTTCTGAGACTCTATTTACTTGG
TGTATATTTATTGCACTTTGCTGATGTTATTTATTAAGATCTTTAGTTTT
ATTACTTGGATCTTGCTTGGGGTAGAGCCTCATGTAATAGAAAGTTTCCT
CAAGTCAATAATGAAGTTCAGAATTTGAATTGAAAAAAA
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