DY258034

Overview
NameDY258034
Unique NameDY258034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_YERE8 (Gamma-glutamyl phosphate reductase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=proA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 213
            D I+      AE F+  VDS+AV+ NASTRF DG +FGLGAEV +ST ++HARGP+G++ L T +WI  G+
Sbjct:  344 DAILTRSLGNAEHFVRAVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLDALTTYKWIGYGD 414          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_VIBVY (Gamma-glutamyl phosphate reductase OS=Vibrio vulnificus (strain YJ016) GN=proA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 213
            D I+    + AE F+    SAAV+ NASTRF DGA+FGLGAEV +ST ++HARGP+G+E L + +W+ + N
Sbjct:  341 DAIMTNHLQNAELFINSAGSAAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLEELTSYKWVGKAN 411          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_VIBVU (Gamma-glutamyl phosphate reductase OS=Vibrio vulnificus GN=proA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 213
            D I+    + AE F+    SAAV+ NASTRF DGA+FGLGAEV +ST ++HARGP+G+E L + +W+ + N
Sbjct:  341 DAIMTNHLQNAELFINSAGSAAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLEELTSYKWVGKAN 411          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_GEOSW (Gamma-glutamyl phosphate reductase OS=Geobacillus sp. (strain WCH70) GN=proA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I++E       F   +D+A ++HNASTRF DG +FG GAE+GIST ++HARGP+G+  + TT+ ++ G G +
Sbjct:  338 EAIISEQNDNVRFFFQAIDAAVLYHNASTRFTDGEQFGYGAEIGISTQKLHARGPMGLRAITTTKSLVYGTGQI 411          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_GEOSL (Gamma-glutamyl phosphate reductase OS=Geobacter sulfurreducens GN=proA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14
Identity = 37/74 (50.00%), Postives = 55/74 (74.32%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + IV  D   A+ F+ +V+S+ V  NASTRF DG + GLGAE+GIST+++H+ GP+G+E L TT++I+ G+G V
Sbjct:  343 EAIVTRDYHNAQRFIREVNSSTVLVNASTRFADGNQLGLGAEIGISTTKLHSFGPMGLEDLTTTKFIVYGDGQV 416          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ENT38 (Gamma-glutamyl phosphate reductase OS=Enterobacter sp. (strain 638) GN=proA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 213
            D I+         F+ +VDS+AV+ NASTRF DG +FGLGAEV +ST ++HARGP+G+E L T +WI  G+
Sbjct:  342 DAILTRKLSHGNRFINEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIGYGD 412          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_CORML (Gamma-glutamyl phosphate reductase OS=Corynebacterium melassecola GN=proA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14
Identity = 34/74 (45.95%), Postives = 54/74 (72.97%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I  ++ + A+ F  +VD+AAV  NAST + DG ++G+GAE+GIST ++HARGP+ +  L +T+WIL+G G +
Sbjct:  357 EAIATQNIETAQRFADRVDAAAVMINASTAYTDGEQYGMGAEIGISTQKLHARGPMALPELTSTKWILQGTGQI 430          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_CORGL (Gamma-glutamyl phosphate reductase OS=Corynebacterium glutamicum GN=proA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14
Identity = 34/74 (45.95%), Postives = 54/74 (72.97%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I  ++ + A+ F  +VD+AAV  NAST + DG ++G+GAE+GIST ++HARGP+ +  L +T+WIL+G G +
Sbjct:  357 EAIATQNIETAQRFADRVDAAAVMINASTAYTDGEQYGMGAEIGISTQKLHARGPMALPELTSTKWILQGTGQI 430          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_CORGB (Gamma-glutamyl phosphate reductase OS=Corynebacterium glutamicum (strain R) GN=proA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14
Identity = 34/74 (45.95%), Postives = 54/74 (72.97%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I  ++ + A+ F  +VD+AAV  NAST + DG ++G+GAE+GIST ++HARGP+ +  L +T+WIL+G G +
Sbjct:  357 EAIATQNIETAQRFADRVDAAAVMINASTAYTDGEQYGMGAEIGISTQKLHARGPMALPELTSTKWILQGTGQI 430          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ALKOO (Gamma-glutamyl phosphate reductase OS=Alkaliphilus oremlandii (strain OhILAs) GN=proA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14
Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I+ E+   A  FL +VD+AAV+ NASTRF DG  FG G E+GIST + HARGP+G+  L+T ++ + GNG +
Sbjct:  338 EAIITENYTNANYFLRRVDAAAVYVNASTRFTDGGAFGFGGEMGISTQKTHARGPMGLNELVTMKYTVVGNGQI 411          
The following BLAST results are available for this feature:
BLAST of DY258034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_YERE81.005e-1453.52Gamma-glutamyl phosphate reductase OS=Yersinia ent... [more]
PROA_VIBVY1.005e-1452.11Gamma-glutamyl phosphate reductase OS=Vibrio vulni... [more]
PROA_VIBVU1.005e-1452.11Gamma-glutamyl phosphate reductase OS=Vibrio vulni... [more]
PROA_GEOSW1.005e-1444.59Gamma-glutamyl phosphate reductase OS=Geobacillus ... [more]
PROA_GEOSL1.005e-1450.00Gamma-glutamyl phosphate reductase OS=Geobacter su... [more]
PROA_ENT381.005e-1452.11Gamma-glutamyl phosphate reductase OS=Enterobacter... [more]
PROA_CORML1.005e-1445.95Gamma-glutamyl phosphate reductase OS=Corynebacter... [more]
PROA_CORGL1.005e-1445.95Gamma-glutamyl phosphate reductase OS=Corynebacter... [more]
PROA_CORGB1.005e-1445.95Gamma-glutamyl phosphate reductase OS=Corynebacter... [more]
PROA_ALKOO1.005e-1450.00Gamma-glutamyl phosphate reductase OS=Alkaliphilus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAB2CH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258034 ID=DY258034; Name=DY258034; organism=Citrus clementina; type=EST; length=489bp
GATTGCATTGTTGCAGAAGATCAAAAAGTTGCTGAAACATTTTTATGTCA
AGTTGACAGTGCTGCAGTATTTCATAATGCGAGTACACGATTCTGTGATG
GAGCACGATTTGGACTTGGTGCAGAGGTTGGAATAAGCACAAGCAGGATT
CATGCTCGCGGTCCAGTCGGAGTTGAAGGATTGCTAACTACTCGATGGAT
ATTGAGAGGGAATGGACACGTCGTAGATGGTGATCAAGGAGTCGTCTATA
CCCACAAGAATCTTGCCTTGCAATCCTAGTAACTTATGGTTCTAAACCAT
GTCATTTGTATAATATTATGCTAGCTGCTTCTGAGACTCTATTTACTTGG
TGTATATTTATTGCACTTTGCTGATGTTATTTATTAAGATCTTTAGTTTT
ATTACTTGGATCTTGCTTGGGGTAGAGCCTCATGTAATAGAAAGTTTCCT
CAAGTCAATAATGAAGTTCAGAATTTGAATTGAAAAAAA
back to top