DY258034

Overview
NameDY258034
Unique NameDY258034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_METSB (Gamma-glutamyl phosphate reductase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=proA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.770e-19
Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            DCIV ED   A+ FL +VDSA V HNAST+F DG  FG G E+GI+T R+HARGPVGVE L T ++ + G+G +
Sbjct:  354 DCIVTEDPAAADRFLAEVDSAIVMHNASTQFADGGEFGFGGEIGIATGRMHARGPVGVEQLTTFKYRVHGDGQI 427          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_METCA (Gamma-glutamyl phosphate reductase OS=Methylococcus capsulatus GN=proA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.770e-19
Identity = 46/74 (62.16%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV ED   A  FL +VDSA+V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL T ++I+ G+GHV
Sbjct:  355 DAIVTEDYGRARRFLREVDSASVMVNASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTTQKFIVLGDGHV 428          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_METBF (Gamma-glutamyl phosphate reductase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=proA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.770e-19
Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNLALQ 273
            D I+ ED    + F   VDS++V  NASTRF DG R+G GAEVGIST++IH+RGPVG+EGLL  ++IL G G VV    G+    YTH+ L L+
Sbjct:  349 DGIITEDASRRKAFTALVDSSSVMVNASTRFADGYRYGKGAEVGISTNKIHSRGPVGMEGLLIYKYILLGKGQVVADYAGENAKPYTHRKLDLK 442          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ALCBS (Gamma-glutamyl phosphate reductase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=proA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.770e-19
Identity = 41/74 (55.41%), Postives = 58/74 (78.38%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I+ E+  +A  FL +VDS++V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +W++ G+GH+
Sbjct:  348 EAIITENYTLARRFLTEVDSSSVMVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWVVLGDGHI 421          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ANAVT (Gamma-glutamyl phosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=proA PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.312e-19
Identity = 46/90 (51.11%), Postives = 61/90 (67.78%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKN 261
            D I+ ED    ETF   V+SA VFHN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T ++ + G GH+V    G+    +TH++
Sbjct:  344 DAIITEDVAAVETFFGLVNSAGVFHNCSTRFADGFRYGFGAEVGISTQQMPPRGPVGLEGLVTYKYQMTGTGHIVATYTGENAKPFTHQD 433          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SYNSC (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain CC9605) GN=proA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.019e-19
Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQGVVYTH 255
            + I+ ED + A+ FL  VDSA V+HN S+RF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRG GH+     +   V+TH
Sbjct:  344 EVILTEDAQTADRFLAAVDSAGVYHNCSSRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYRLRGEGHITADYANGSCVFTH 430          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_LEGPC (Gamma-glutamyl phosphate reductase OS=Legionella pneumophila (strain Corby) GN=proA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.019e-19
Identity = 38/74 (51.35%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + ++AED+   + FL +VD+AAV+ NAST F DG  FGLGAE+GIST ++HARGP+G++ L + +W++RG G +
Sbjct:  342 EAVIAEDESAIDKFLTEVDAAAVYANASTSFTDGGEFGLGAEIGISTQKVHARGPMGLDALTSYKWVIRGTGQI 415          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_HELHP (Gamma-glutamyl phosphate reductase OS=Helicobacter hepaticus GN=proA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.019e-19
Identity = 41/74 (55.41%), Postives = 59/74 (79.73%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I+ +D+ +A+TF+ +VD+A V+ NASTRF DG  FG GAEVGISTS++HARGP+G+E LL+ ++ + GNG V
Sbjct:  338 ESIITQDEVIAQTFMREVDAACVYVNASTRFSDGGEFGFGAEVGISTSKLHARGPMGIESLLSYKYCITGNGQV 411          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ANASP (Gamma-glutamyl phosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=proA PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 3.943e-19
Identity = 46/90 (51.11%), Postives = 61/90 (67.78%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKN 261
            D I+ ED    +TF   V+SA VFHN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T ++ + G GH+V    G+    +THK+
Sbjct:  344 DAIITEDVAAVKTFFGLVNSAGVFHNCSTRFADGFRYGFGAEVGISTQQMPPRGPVGLEGLVTYKYQMTGAGHIVATYTGENAKPFTHKD 433          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ACIBY (Gamma-glutamyl phosphate reductase OS=Acinetobacter baumannii (strain AYE) GN=proA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.943e-19
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV E+  +A  FL +VDS++V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +WI+ G+G +
Sbjct:  346 DAIVTENYTLARQFLARVDSSSVVVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWIVLGDGQI 419          
The following BLAST results are available for this feature:
BLAST of DY258034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_METSB1.770e-1958.11Gamma-glutamyl phosphate reductase OS=Methylocella... [more]
PROA_METCA1.770e-1962.16Gamma-glutamyl phosphate reductase OS=Methylococcu... [more]
PROA_METBF1.770e-1953.19Gamma-glutamyl phosphate reductase OS=Methanosarci... [more]
PROA_ALCBS1.770e-1955.41Gamma-glutamyl phosphate reductase OS=Alcanivorax ... [more]
PROA_ANAVT2.312e-1951.11Gamma-glutamyl phosphate reductase OS=Anabaena var... [more]
PROA_SYNSC3.019e-1952.87Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_LEGPC3.019e-1951.35Gamma-glutamyl phosphate reductase OS=Legionella p... [more]
PROA_HELHP3.019e-1955.41Gamma-glutamyl phosphate reductase OS=Helicobacter... [more]
PROA_ANASP3.943e-1951.11Gamma-glutamyl phosphate reductase OS=Anabaena sp.... [more]
PROA_ACIBY3.943e-1958.11Gamma-glutamyl phosphate reductase OS=Acinetobacte... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258034 ID=DY258034; Name=DY258034; organism=Citrus clementina; type=EST; length=489bp
GATTGCATTGTTGCAGAAGATCAAAAAGTTGCTGAAACATTTTTATGTCA
AGTTGACAGTGCTGCAGTATTTCATAATGCGAGTACACGATTCTGTGATG
GAGCACGATTTGGACTTGGTGCAGAGGTTGGAATAAGCACAAGCAGGATT
CATGCTCGCGGTCCAGTCGGAGTTGAAGGATTGCTAACTACTCGATGGAT
ATTGAGAGGGAATGGACACGTCGTAGATGGTGATCAAGGAGTCGTCTATA
CCCACAAGAATCTTGCCTTGCAATCCTAGTAACTTATGGTTCTAAACCAT
GTCATTTGTATAATATTATGCTAGCTGCTTCTGAGACTCTATTTACTTGG
TGTATATTTATTGCACTTTGCTGATGTTATTTATTAAGATCTTTAGTTTT
ATTACTTGGATCTTGCTTGGGGTAGAGCCTCATGTAATAGAAAGTTTCCT
CAAGTCAATAATGAAGTTCAGAATTTGAATTGAAAAAAA
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