DY258034

Overview
NameDY258034
Unique NameDY258034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:1920..2408. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ACIBT (Gamma-glutamyl phosphate reductase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=proA PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 3.943e-19
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV E+  +A  FL +VDS++V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +WI+ G+G +
Sbjct:  346 DAIVTENYTLARQFLARVDSSSVVVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWIVLGDGQI 419          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ACIBS (Gamma-glutamyl phosphate reductase OS=Acinetobacter baumannii (strain SDF) GN=proA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.943e-19
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV E+  +A  FL +VDS++V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +WI+ G+G +
Sbjct:  346 DAIVTENYTLARQFLARVDSSSVVVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWIVLGDGQI 419          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ACIBC (Gamma-glutamyl phosphate reductase OS=Acinetobacter baumannii (strain ACICU) GN=proA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.943e-19
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV E+  +A  FL +VDS++V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +WI+ G+G +
Sbjct:  346 DAIVTENYTLARQFLARVDSSSVVVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWIVLGDGQI 419          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ACIB5 (Gamma-glutamyl phosphate reductase OS=Acinetobacter baumannii (strain AB0057) GN=proA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.943e-19
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV E+  +A  FL +VDS++V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +WI+ G+G +
Sbjct:  346 DAIVTENYTLARQFLARVDSSSVVVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWIVLGDGQI 419          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ACIB3 (Gamma-glutamyl phosphate reductase OS=Acinetobacter baumannii (strain AB307-0294) GN=proA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.943e-19
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV E+  +A  FL +VDS++V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +WI+ G+G +
Sbjct:  346 DAIVTENYTLARQFLARVDSSSVVVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWIVLGDGQI 419          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SYNY3 (Probable gamma-glutamyl phosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=proA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.150e-19
Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNL 264
            D I++ED   AE F  +VDSA V+HN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T ++ L G+GH+     G     +TH +L
Sbjct:  343 DGIISEDLTAAEQFCQRVDSAGVYHNCSTRFADGFRYGFGAEVGISTQKMPPRGPVGLEGLVTYKYQLWGHGHIAATYTGQGAKAFTHLDL 433          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SYNP6 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=proA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.150e-19
Identity = 45/90 (50.00%), Postives = 59/90 (65.56%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKN 261
            D I  ED   A  F  QVDSA V+HN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T +++L G+G +     G Q   + H++
Sbjct:  341 DAIATEDAAAAAQFFSQVDSAGVYHNCSTRFADGFRYGFGAEVGISTQKLPPRGPVGLEGLVTYKYVLSGDGQIAATYSGAQAKPFLHRD 430          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SYNE7 (Gamma-glutamyl phosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=proA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.150e-19
Identity = 45/90 (50.00%), Postives = 59/90 (65.56%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKN 261
            D I  ED   A  F  QVDSA V+HN STRF DG R+G GAEVGIST ++  RGPVG+EGL+T +++L G+G +     G Q   + H++
Sbjct:  341 DAIATEDAAAAAQFFSQVDSAGVYHNCSTRFADGFRYGFGAEVGISTQKLPPRGPVGLEGLVTYKYVLSGDGQIAATYSGAQAKPFLHRD 430          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_METBU (Gamma-glutamyl phosphate reductase OS=Methanococcoides burtonii (strain DSM 6242) GN=proA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.150e-19
Identity = 48/91 (52.75%), Postives = 64/91 (70.33%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNL 264
            D I+ E++   + F+  VDS++V  NASTRF DG R+G GAEVGIST++IHARGPVG+EGL+  +++L GNG  V    GD    +THK L
Sbjct:  349 DAIITENKTKRKQFIALVDSSSVMVNASTRFADGFRYGKGAEVGISTNKIHARGPVGMEGLVIYKYVLLGNGDKVATYAGDTPRPFTHKEL 439          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_STRP3 (Gamma-glutamyl phosphate reductase OS=Streptococcus pyogenes serotype M3 GN=proA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.726e-19
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I+  D K AETF   VD+AAV+ NASTRF DG  FGLGAE+GIST +IHARGP+G+E L +T++ + G+GH+
Sbjct:  341 EAIITRDTKAAETFQDLVDAAAVYVNASTRFTDGFVFGLGAEIGISTQKIHARGPMGLEALTSTKFYINGDGHI 414          
The following BLAST results are available for this feature:
BLAST of DY258034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_ACIBT3.943e-1958.11Gamma-glutamyl phosphate reductase OS=Acinetobacte... [more]
PROA_ACIBS3.943e-1958.11Gamma-glutamyl phosphate reductase OS=Acinetobacte... [more]
PROA_ACIBC3.943e-1958.11Gamma-glutamyl phosphate reductase OS=Acinetobacte... [more]
PROA_ACIB53.943e-1958.11Gamma-glutamyl phosphate reductase OS=Acinetobacte... [more]
PROA_ACIB33.943e-1958.11Gamma-glutamyl phosphate reductase OS=Acinetobacte... [more]
PROA_SYNY35.150e-1951.65Probable gamma-glutamyl phosphate reductase OS=Syn... [more]
PROA_SYNP65.150e-1950.00Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_SYNE75.150e-1950.00Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_METBU5.150e-1952.75Gamma-glutamyl phosphate reductase OS=Methanococco... [more]
PROA_STRP36.726e-1958.11Gamma-glutamyl phosphate reductase OS=Streptococcu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258034 ID=DY258034; Name=DY258034; organism=Citrus clementina; type=EST; length=489bp
GATTGCATTGTTGCAGAAGATCAAAAAGTTGCTGAAACATTTTTATGTCA
AGTTGACAGTGCTGCAGTATTTCATAATGCGAGTACACGATTCTGTGATG
GAGCACGATTTGGACTTGGTGCAGAGGTTGGAATAAGCACAAGCAGGATT
CATGCTCGCGGTCCAGTCGGAGTTGAAGGATTGCTAACTACTCGATGGAT
ATTGAGAGGGAATGGACACGTCGTAGATGGTGATCAAGGAGTCGTCTATA
CCCACAAGAATCTTGCCTTGCAATCCTAGTAACTTATGGTTCTAAACCAT
GTCATTTGTATAATATTATGCTAGCTGCTTCTGAGACTCTATTTACTTGG
TGTATATTTATTGCACTTTGCTGATGTTATTTATTAAGATCTTTAGTTTT
ATTACTTGGATCTTGCTTGGGGTAGAGCCTCATGTAATAGAAAGTTTCCT
CAAGTCAATAATGAAGTTCAGAATTTGAATTGAAAAAAA
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