DY258034

Overview
NameDY258034
Unique NameDY258034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_METS4 (Gamma-glutamyl phosphate reductase OS=Methylobacterium sp. (strain 4-46) GN=proA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.726e-19
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV  D+  AE FL +VDSA V HNAST+F DG  FG GAE+GI+T R+HARGPVGVE L T ++ + G+G V
Sbjct:  356 DAIVTADEAAAERFLAEVDSAIVVHNASTQFADGGEFGFGAEIGIATGRMHARGPVGVEQLTTFKYRVHGSGQV 429          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_METAC (Gamma-glutamyl phosphate reductase OS=Methanosarcina acetivorans GN=proA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.726e-19
Identity = 49/94 (52.13%), Postives = 65/94 (69.15%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNLALQ 273
            D I+ E+    + F+  VDS++V  NASTRF DG R+G GAEVGIST++IH+RGPVG+EGLL  ++IL G G VV    G+    YTH+ L L+
Sbjct:  349 DGIITENASRRKEFIGLVDSSSVMVNASTRFADGYRYGKGAEVGISTNKIHSRGPVGMEGLLIYKYILMGKGQVVADYAGENAKPYTHRKLDLK 442          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_DECAR (Gamma-glutamyl phosphate reductase OS=Dechloromonas aromatica (strain RCB) GN=proA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.726e-19
Identity = 42/74 (56.76%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I+ ++   A  FL +VDSA+V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +W++ G+GHV
Sbjct:  343 EAIITDNHPKAMRFLREVDSASVMINASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWVVLGDGHV 416          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_STRPZ (Gamma-glutamyl phosphate reductase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=proA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.784e-19
Identity = 43/74 (58.11%), Postives = 58/74 (78.38%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I+  D KVAETF   VD+AAV+ NASTRF DG  FGLGAE+GIST ++HARGP+G+E L +T++ + G+GH+
Sbjct:  341 EAIITRDIKVAETFQDLVDAAAVYVNASTRFTDGFVFGLGAEIGISTQKMHARGPMGLEALTSTKFYINGDGHI 414          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_NITEU (Gamma-glutamyl phosphate reductase OS=Nitrosomonas europaea GN=proA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.784e-19
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV ED   A  FL +VDS++V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL + ++I+ G+GH+
Sbjct:  347 DAIVTEDYSRARQFLREVDSSSVMINASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTSQKFIVLGDGHI 420          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_FRAP2 (Gamma-glutamyl phosphate reductase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=proA PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 8.784e-19
Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            +CIV E     E FL +VD+AAV+ NASTRF DG+ FG G E+GIST ++HARGP+G+  L T ++I+RGNG V
Sbjct:  339 ECIVTESYTNTEIFLNEVDAAAVYANASTRFTDGSEFGFGGEIGISTQKLHARGPMGINELTTLKYIIRGNGQV 412          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA1_BACLD (Gamma-glutamyl phosphate reductase 1 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=proA1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.784e-19
Identity = 40/74 (54.05%), Postives = 59/74 (79.73%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I+ E+Q+ A  FL  VD+AAV+HNASTRF DG  FG GAE+GIST ++HARGP+G++ L ++++I++GNG +
Sbjct:  340 EAILTENQENARYFLTSVDAAAVYHNASTRFTDGFEFGYGAEIGISTQKLHARGPMGLKALTSSKYIIKGNGQI 413          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_OCEIH (Gamma-glutamyl phosphate reductase OS=Oceanobacillus iheyensis GN=proA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.147e-18
Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I+ E++  AE F  QVD+AAV+HNASTRF DG  FG GAE+GIST ++HARGP+G+E L +T++++ G+G +
Sbjct:  340 EAIITENKMNAEQFQLQVDAAAVYHNASTRFTDGFEFGYGAEIGISTQKLHARGPMGLEALTSTKFVISGSGQI 413          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_CLOTH (Gamma-glutamyl phosphate reductase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=proA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.147e-18
Identity = 44/76 (57.89%), Postives = 56/76 (73.68%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD 228
            D I+   ++ A  F+  VDS  VF N STRF DG R+G GAEVGISTS+IHARGPVG++GLL  ++ L GNGH+V+
Sbjct:  336 DSIITNSKEKAAAFMSLVDSGNVFWNCSTRFSDGFRYGFGAEVGISTSKIHARGPVGLDGLLIYKYKLIGNGHIVE 411          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PSEAE (Gamma-glutamyl phosphate reductase OS=Pseudomonas aeruginosa GN=proA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.498e-18
Identity = 42/74 (56.76%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D I+ E+   A  FL +VDSA+V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL + ++++ G+GHV
Sbjct:  346 DAIITENFSDARRFLAEVDSASVMVNASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTSEKYVVFGDGHV 419          
The following BLAST results are available for this feature:
BLAST of DY258034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_METS46.726e-1959.46Gamma-glutamyl phosphate reductase OS=Methylobacte... [more]
PROA_METAC6.726e-1952.13Gamma-glutamyl phosphate reductase OS=Methanosarci... [more]
PROA_DECAR6.726e-1956.76Gamma-glutamyl phosphate reductase OS=Dechloromona... [more]
PROA_STRPZ8.784e-1958.11Gamma-glutamyl phosphate reductase OS=Streptococcu... [more]
PROA_NITEU8.784e-1958.11Gamma-glutamyl phosphate reductase OS=Nitrosomonas... [more]
PROA_FRAP28.784e-1956.76Gamma-glutamyl phosphate reductase OS=Francisella ... [more]
PROA1_BACLD8.784e-1954.05Gamma-glutamyl phosphate reductase 1 OS=Bacillus l... [more]
PROA_OCEIH1.147e-1854.05Gamma-glutamyl phosphate reductase OS=Oceanobacill... [more]
PROA_CLOTH1.147e-1857.89Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_PSEAE1.498e-1856.76Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258034 ID=DY258034; Name=DY258034; organism=Citrus clementina; type=EST; length=489bp
GATTGCATTGTTGCAGAAGATCAAAAAGTTGCTGAAACATTTTTATGTCA
AGTTGACAGTGCTGCAGTATTTCATAATGCGAGTACACGATTCTGTGATG
GAGCACGATTTGGACTTGGTGCAGAGGTTGGAATAAGCACAAGCAGGATT
CATGCTCGCGGTCCAGTCGGAGTTGAAGGATTGCTAACTACTCGATGGAT
ATTGAGAGGGAATGGACACGTCGTAGATGGTGATCAAGGAGTCGTCTATA
CCCACAAGAATCTTGCCTTGCAATCCTAGTAACTTATGGTTCTAAACCAT
GTCATTTGTATAATATTATGCTAGCTGCTTCTGAGACTCTATTTACTTGG
TGTATATTTATTGCACTTTGCTGATGTTATTTATTAAGATCTTTAGTTTT
ATTACTTGGATCTTGCTTGGGGTAGAGCCTCATGTAATAGAAAGTTTCCT
CAAGTCAATAATGAAGTTCAGAATTTGAATTGAAAAAAA
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